RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.91□□□□□ -0.82
MKS1-211ENST00000581761 A0A0U1RRA0 63 aa9.91□□□□□ -0.82
MKS1-211ENST00000581761 C3orf84H3BNL1 204 aa9.91□□□□□ -0.82
MKS1-211ENST00000581761 IFITM1P13164 125 aa9.91□□□□□ -0.82
MKS1-211ENST00000581761 MALP21145 153 aa9.91□□□□□ -0.82
MKS1-211ENST00000581761 FOXI1Q12951 378 aa9.91□□□□□ -0.82
MKS1-211ENST00000581761 MUC7Q8TAX7 377 aa9.91□□□□□ -0.82
MKS1-211ENST00000581761 LYSTQ99698 3801 aa9.91□□□□□ -0.82
MKS1-211ENST00000581761 STARD9Q9P2P6 4700 aa9.91□□□□□ -0.82
MKS1-211ENST00000581761 A0A1W2PPM0 123 aa9.9□□□□□ -0.82
MKS1-211ENST00000581761 CFC1BP0CG36 223 aa9.9□□□□□ -0.82
MKS1-211ENST00000581761 CFC1P0CG37 223 aa9.9□□□□□ -0.82
MKS1-211ENST00000581761 C6orf226Q5I0X4 101 aa9.9□□□□□ -0.82
MKS1-211ENST00000581761 Q8IZM0 81 aa9.9□□□□□ -0.82
MKS1-211ENST00000581761 DAND5Q8N907 189 aa9.9□□□□□ -0.82
MKS1-211ENST00000581761 TRAV8-4A0A0B4J246 113 aa9.89□□□□□ -0.83
MKS1-211ENST00000581761 UBE2V1Q13404 147 aa9.89□□□□□ -0.83
MKS1-211ENST00000581761 LINC01556Q5JQF7 62 aa9.89□□□□□ -0.83
MKS1-211ENST00000581761 CFAP161Q6P656 301 aa9.89□□□□□ -0.83
MKS1-211ENST00000581761 SFTA2Q6UW10 78 aa9.89□□□□□ -0.83
MKS1-211ENST00000581761 PGPEP1Q9NXJ5 209 aa9.89□□□□□ -0.83
MKS1-211ENST00000581761 FABP2P12104 132 aa9.88□□□□□ -0.83
MKS1-211ENST00000581761 A0A0B4J2C4 111 aa9.87□□□□□ -0.83
MKS1-211ENST00000581761 CASC10Q5T4H9 136 aa9.87□□□□□ -0.83
MKS1-211ENST00000581761 LINC00308Q8TCZ7 52 aa9.87□□□□□ -0.83
MKS1-211ENST00000581761 COPS9Q8WXC6 57 aa9.87□□□□□ -0.83
MKS1-211ENST00000581761 GAGE10A6NGK3 116 aa9.86□□□□□ -0.83
MKS1-211ENST00000581761 K7EP34 96 aa9.86□□□□□ -0.83
MKS1-211ENST00000581761 EIF4EBP3O60516 100 aaPredicted RBP9.86□□□□□ -0.83
MKS1-211ENST00000581761 TSPAN13O95857 204 aa9.86□□□□□ -0.83
MKS1-211ENST00000581761 CCL18P55774 89 aa9.86□□□□□ -0.83
MKS1-211ENST00000581761 LINC00158P58513 81 aa9.86□□□□□ -0.83
MKS1-211ENST00000581761 GTF2H5Q6ZYL4 71 aa9.86□□□□□ -0.83
MKS1-211ENST00000581761 PRO1854Q9UHT4 67 aa9.86□□□□□ -0.83
MKS1-211ENST00000581761 LINC00588Q9Y4M8 146 aa9.86□□□□□ -0.83
MKS1-211ENST00000581761 SPCS1Q9Y6A9 102 aa9.86□□□□□ -0.83
MKS1-211ENST00000581761 IBA57-AS1B1ANH7 110 aa9.85□□□□□ -0.83
MKS1-211ENST00000581761 CXCL5P42830 114 aa9.85□□□□□ -0.83
MKS1-211ENST00000581761 CKS1BP61024 79 aa9.85□□□□□ -0.83
MKS1-211ENST00000581761 KIAA0087Q14695 138 aa9.85□□□□□ -0.83
MKS1-211ENST00000581761 RYR2Q92736 4967 aa9.85□□□□□ -0.83
MKS1-211ENST00000581761 DYNC2H1Q8NCM8 4307 aaKnown RBP9.85□□□□□ -0.83
MKS1-211ENST00000581761 DNAH10OSP0CZ25 163 aa9.84□□□□□ -0.83
MKS1-211ENST00000581761 SPAG11BQ08648 103 aa9.84□□□□□ -0.83
MKS1-211ENST00000581761 C2orf82Q6UX34 121 aa9.84□□□□□ -0.83
MKS1-211ENST00000581761 ERG28Q9UKR5 140 aa9.84□□□□□ -0.83
MKS1-211ENST00000581761 KLK5Q9Y337 293 aaPredicted RBP9.84□□□□□ -0.83
MKS1-211ENST00000581761 SOSTDC1Q6X4U4 206 aa9.83□□□□□ -0.84
MKS1-211ENST00000581761 MIR7-3HGQ8N6C7 128 aa9.83□□□□□ -0.84
MKS1-211ENST00000581761 PFN2P35080 140 aa9.82□□□□□ -0.84
MKS1-211ENST00000581761 C1orf43Q9BWL3 253 aa9.82□□□□□ -0.84
MKS1-211ENST00000581761 H7C2G1 150 aa9.81□□□□□ -0.84
MKS1-211ENST00000581761 Q1RN00 199 aa9.81□□□□□ -0.84
MKS1-211ENST00000581761 PPDPFQ9H3Y8 114 aa9.81□□□□□ -0.84
MKS1-211ENST00000581761 LOC107984156A0A0G2JMH3 177 aa9.8□□□□□ -0.84
MKS1-211ENST00000581761 LYRM7Q5U5X0 104 aa9.8□□□□□ -0.84
MKS1-211ENST00000581761 KRTAP26-1Q6PEX3 210 aa9.8□□□□□ -0.84
MKS1-211ENST00000581761 ARL17AQ8IVW1 177 aa9.8□□□□□ -0.84
MKS1-211ENST00000581761 IGKV2D-24A0A075B6R9 120 aa9.79□□□□□ -0.84
MKS1-211ENST00000581761 C6orf223Q8N319 242 aa9.79□□□□□ -0.84
MKS1-211ENST00000581761 UPK3BQ9BT76 320 aa9.79□□□□□ -0.84
MKS1-211ENST00000581761 SACSQ9NZJ4 4579 aa9.78□□□□□ -0.84
MKS1-211ENST00000581761 RPL13AP40429 203 aaKnown RBP9.78□□□□□ -0.84
MKS1-211ENST00000581761 PSMB2P49721 201 aa9.78□□□□□ -0.84
MKS1-211ENST00000581761 LINC00526Q96FQ7 95 aa9.78□□□□□ -0.84
MKS1-211ENST00000581761 Q9HAA7 133 aa9.78□□□□□ -0.84
MKS1-211ENST00000581761 SCGB1C2P0DMR2 95 aa9.77□□□□□ -0.85
MKS1-211ENST00000581761 APLNQ9ULZ1 77 aa9.77□□□□□ -0.85
MKS1-211ENST00000581761 HIGD2BQ4VC39 106 aa9.76□□□□□ -0.85
MKS1-211ENST00000581761 UNQ6190/PRO20217Q6UXQ8 127 aa9.76□□□□□ -0.85
MKS1-211ENST00000581761 UBE2DNLQ8IWF7 75 aa9.76□□□□□ -0.85
MKS1-211ENST00000581761 SND1-IT1Q9HBX3 110 aa9.76□□□□□ -0.85
MKS1-211ENST00000581761 ZNF561-AS1K7EIQ3 104 aa9.75□□□□□ -0.85
MKS1-211ENST00000581761 COX17Q14061 63 aa9.75□□□□□ -0.85
MKS1-211ENST00000581761 C10orf25Q5T742 122 aa9.75□□□□□ -0.85
MKS1-211ENST00000581761 NTN5Q8WTR8 489 aaPredicted RBP9.75□□□□□ -0.85
MKS1-211ENST00000581761 PLECQ15149 4684 aaKnown RBP9.75□□□□□ -0.85
MKS1-211ENST00000581761 C9orf116Q5BN46 136 aaPredicted RBP9.74□□□□□ -0.85
MKS1-211ENST00000581761 C15orf56Q8N910 161 aa9.74□□□□□ -0.85
MKS1-211ENST00000581761 RMI2Q96E14 147 aa9.74□□□□□ -0.85
MKS1-211ENST00000581761 NUPR2A6NF83 97 aa9.73□□□□□ -0.85
MKS1-211ENST00000581761 GVQW2A0A096LPI5 108 aaPredicted RBP9.72□□□□□ -0.85
MKS1-211ENST00000581761 TRAV13-2A0A0B4J235 113 aa9.72□□□□□ -0.85
MKS1-211ENST00000581761 TRBV30A0A0K0K1B3 111 aa9.72□□□□□ -0.85
MKS1-211ENST00000581761 LCE6AA0A183 80 aa9.72□□□□□ -0.85
MKS1-211ENST00000581761 CAMK2N2Q96S95 79 aa9.72□□□□□ -0.85
MKS1-211ENST00000581761 H3BMG7 143 aa9.71□□□□□ -0.86
MKS1-211ENST00000581761 TRIAP1O43715 76 aa9.71□□□□□ -0.86
MKS1-211ENST00000581761 TCL1BO95988 128 aa9.71□□□□□ -0.86
MKS1-211ENST00000581761 C2orf48Q96LS8 159 aa9.71□□□□□ -0.86
MKS1-211ENST00000581761 C6orf48Q9UBA6 75 aa9.71□□□□□ -0.86
MKS1-211ENST00000581761 HYDINQ4G0P3 5121 aa9.7□□□□□ -0.86
MKS1-211ENST00000581761 TRBV20-1A0A075B6N2 111 aa9.7□□□□□ -0.86
MKS1-211ENST00000581761 DNAH1Q9P2D7 4330 aa9.7□□□□□ -0.86
MKS1-211ENST00000581761 IGKV2-28A0A075B6P5 120 aa9.69□□□□□ -0.86
MKS1-211ENST00000581761 IGKV2D-28P01615 120 aa9.69□□□□□ -0.86
MKS1-211ENST00000581761 COX6CP09669 75 aa9.69□□□□□ -0.86
MKS1-211ENST00000581761 LINC00337Q8N6G1 96 aa9.69□□□□□ -0.86
MKS1-211ENST00000581761 ALMS1Q8TCU4 4167 aa9.68□□□□□ -0.86
MKS1-211ENST00000581761 F8WDY8 70 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms