RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 PAPPA-AS1Q5QFB9 102 aa8□□□□□ -1.13
CSNK1D-219ENST00000581660 OR10D4PQ8NGN7 298 aa8□□□□□ -1.13
CSNK1D-219ENST00000581660 ORAOV1Q8WV07 137 aa8□□□□□ -1.13
CSNK1D-219ENST00000581660 PYGO1Q9Y3Y4 419 aa8□□□□□ -1.13
CSNK1D-219ENST00000581660 IGHV3OR16-9A0A0B4J2B5 98 aa7.99□□□□□ -1.13
CSNK1D-219ENST00000581660 MRPS36P82909 103 aaKnown RBP7.99□□□□□ -1.13
CSNK1D-219ENST00000581660 UNQ6190/PRO20217Q6UXQ8 127 aa7.99□□□□□ -1.13
CSNK1D-219ENST00000581660 LINC00173Q6ZV60 143 aa7.99□□□□□ -1.13
CSNK1D-219ENST00000581660 KRTAP4-1Q9BYQ7 146 aa7.99□□□□□ -1.13
CSNK1D-219ENST00000581660 IFI27P40305 119 aaPredicted RBP7.98□□□□□ -1.13
CSNK1D-219ENST00000581660 CTAG1AP78358 180 aa7.98□□□□□ -1.13
CSNK1D-219ENST00000581660 IFITM10A6NMD0 228 aa7.97□□□□□ -1.13
CSNK1D-219ENST00000581660 NUPR1O60356 82 aa7.97□□□□□ -1.13
CSNK1D-219ENST00000581660 KRTAP13-2Q52LG2 175 aa7.97□□□□□ -1.13
CSNK1D-219ENST00000581660 SMCO4Q9NRQ5 59 aa7.97□□□□□ -1.13
CSNK1D-219ENST00000581660 C6orf48Q9UBA6 75 aa7.97□□□□□ -1.13
CSNK1D-219ENST00000581660 CYSLTR1Q9Y271 337 aa7.97□□□□□ -1.13
CSNK1D-219ENST00000581660 NDUFA1O15239 70 aa7.96□□□□□ -1.14
CSNK1D-219ENST00000581660 FABP9Q0Z7S8 132 aa7.96□□□□□ -1.14
CSNK1D-219ENST00000581660 GAGE2EQ4V326 116 aa7.96□□□□□ -1.14
CSNK1D-219ENST00000581660 LINC00304Q8N9R0 145 aa7.96□□□□□ -1.14
CSNK1D-219ENST00000581660 PPDPFQ9H3Y8 114 aa7.96□□□□□ -1.14
CSNK1D-219ENST00000581660 GAGE2DQ9UEU5 116 aa7.96□□□□□ -1.14
CSNK1D-219ENST00000581660 RAB5BP61020 215 aa7.95□□□□□ -1.14
CSNK1D-219ENST00000581660 LCE2CQ5TA81 110 aa7.95□□□□□ -1.14
CSNK1D-219ENST00000581660 Q6ZN92 141 aa7.95□□□□□ -1.14
CSNK1D-219ENST00000581660 TRAPPC1Q9Y5R8 145 aa7.95□□□□□ -1.14
CSNK1D-219ENST00000581660 LOC389332A0A1B0GUA5 103 aa7.94□□□□□ -1.14
CSNK1D-219ENST00000581660 SEC11AP67812 179 aa7.94□□□□□ -1.14
CSNK1D-219ENST00000581660 KIAA0087Q14695 138 aa7.94□□□□□ -1.14
CSNK1D-219ENST00000581660 ZC2HC1BQ5TFG8 222 aa7.94□□□□□ -1.14
CSNK1D-219ENST00000581660 C2orf82Q6UX34 121 aa7.94□□□□□ -1.14
CSNK1D-219ENST00000581660 ALKBH7Q9BT30 221 aaPredicted RBP7.94□□□□□ -1.14
CSNK1D-219ENST00000581660 MRPL18Q9H0U6 180 aaKnown RBP7.94□□□□□ -1.14
CSNK1D-219ENST00000581660 LINC01546A6NGU7 62 aa7.93□□□□□ -1.14
CSNK1D-219ENST00000581660 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.93□□□□□ -1.14
CSNK1D-219ENST00000581660 LINC00242Q5T6M2 205 aa7.93□□□□□ -1.14
CSNK1D-219ENST00000581660 TMEM141Q96I45 108 aa7.93□□□□□ -1.14
CSNK1D-219ENST00000581660 C2orf88Q9BSF0 95 aa7.93□□□□□ -1.14
CSNK1D-219ENST00000581660 IGLV4-3A0A075B6K6 122 aa7.92□□□□□ -1.14
CSNK1D-219ENST00000581660 RPL28P46779 137 aaKnown RBP7.92□□□□□ -1.14
CSNK1D-219ENST00000581660 C9orf129Q5T035 196 aaKnown RBP7.92□□□□□ -1.14
CSNK1D-219ENST00000581660 C2orf66Q6UXQ4 117 aa7.92□□□□□ -1.14
CSNK1D-219ENST00000581660 TIMM17AQ99595 171 aa7.92□□□□□ -1.14
CSNK1D-219ENST00000581660 VCX2Q9H322 139 aa7.92□□□□□ -1.14
CSNK1D-219ENST00000581660 CFC1BP0CG36 223 aa7.91□□□□□ -1.14
CSNK1D-219ENST00000581660 FAM229BQ4G0N7 80 aa7.91□□□□□ -1.14
CSNK1D-219ENST00000581660 TEX43Q6ZNM6 134 aa7.91□□□□□ -1.14
CSNK1D-219ENST00000581660 FA2HQ7L5A8 372 aa7.91□□□□□ -1.14
CSNK1D-219ENST00000581660 TGIF2-C20orf24A0A0A6YYL0 155 aa7.9□□□□□ -1.14
CSNK1D-219ENST00000581660 KIAA1644Q3SXP7 199 aa7.9□□□□□ -1.14
CSNK1D-219ENST00000581660 ERASQ7Z444 233 aa7.9□□□□□ -1.14
CSNK1D-219ENST00000581660 LINC01561Q8N1V8 128 aa7.9□□□□□ -1.14
CSNK1D-219ENST00000581660 TOMM6Q96B49 74 aa7.9□□□□□ -1.14
CSNK1D-219ENST00000581660 ANAPC11Q9NYG5 84 aa7.9□□□□□ -1.14
CSNK1D-219ENST00000581660 IGIPA6NJ69 53 aa7.89□□□□□ -1.15
CSNK1D-219ENST00000581660 NDUFC2-KCTD14E9PQ53 114 aa7.89□□□□□ -1.15
CSNK1D-219ENST00000581660 BCE1O60756 84 aa7.89□□□□□ -1.15
CSNK1D-219ENST00000581660 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
CSNK1D-219ENST00000581660 KRTAP13-3Q3SY46 172 aa7.89□□□□□ -1.15
CSNK1D-219ENST00000581660 FP248Q71RG6 208 aaPredicted RBP7.89□□□□□ -1.15
CSNK1D-219ENST00000581660 LINC00614P0C842 121 aa7.88□□□□□ -1.15
CSNK1D-219ENST00000581660 MT1HP80294 61 aa7.88□□□□□ -1.15
CSNK1D-219ENST00000581660 LINC00337Q8N6G1 96 aa7.88□□□□□ -1.15
CSNK1D-219ENST00000581660 TRBV30A0A0K0K1B3 111 aa7.87□□□□□ -1.15
CSNK1D-219ENST00000581660 LORP23490 312 aaPredicted RBP7.87□□□□□ -1.15
CSNK1D-219ENST00000581660 FAM19A3Q7Z5A8 133 aa7.87□□□□□ -1.15
CSNK1D-219ENST00000581660 SLC7A5P1Q8MH63 180 aa7.87□□□□□ -1.15
CSNK1D-219ENST00000581660 LINC00469Q8N7U9 141 aa7.87□□□□□ -1.15
CSNK1D-219ENST00000581660 YPEL4Q96NS1 127 aa7.87□□□□□ -1.15
CSNK1D-219ENST00000581660 SCGB3A1Q96QR1 104 aa7.87□□□□□ -1.15
CSNK1D-219ENST00000581660 AMELXQ99217 191 aa7.87□□□□□ -1.15
CSNK1D-219ENST00000581660 KRTAP19-2Q3LHN2 52 aa7.86□□□□□ -1.15
CSNK1D-219ENST00000581660 LBHQ53QV2 105 aaPredicted RBP7.86□□□□□ -1.15
CSNK1D-219ENST00000581660 C22orf24Q9Y442 160 aa7.86□□□□□ -1.15
CSNK1D-219ENST00000581660 HERVK_113P63121 156 aa7.85□□□□□ -1.15
CSNK1D-219ENST00000581660 C18orf32Q8TCD1 76 aa7.85□□□□□ -1.15
CSNK1D-219ENST00000581660 CHCHD1Q96BP2 118 aaKnown RBP7.85□□□□□ -1.15
CSNK1D-219ENST00000581660 TOMM7Q9P0U1 55 aa7.85□□□□□ -1.15
CSNK1D-219ENST00000581660 SSPOA2VEC9 5147 aa7.85□□□□□ -1.15
CSNK1D-219ENST00000581660 ATP5LO75964 103 aa7.84□□□□□ -1.15
CSNK1D-219ENST00000581660 KRTAP13-1Q8IUC0 172 aa7.84□□□□□ -1.15
CSNK1D-219ENST00000581660 PACRGQ96M98 296 aaPredicted RBP7.84□□□□□ -1.15
CSNK1D-219ENST00000581660 TP73-AS1Q9UF72 201 aa7.84□□□□□ -1.15
CSNK1D-219ENST00000581660 HBDP02042 147 aa7.83□□□□□ -1.16
CSNK1D-219ENST00000581660 XAGE1AQ9HD64 81 aa7.83□□□□□ -1.16
CSNK1D-219ENST00000581660 IGKV2D-26A0A0A0MRZ7 120 aa7.82□□□□□ -1.16
CSNK1D-219ENST00000581660 KRTAP10-6P60371 365 aaPredicted RBP7.82□□□□□ -1.16
CSNK1D-219ENST00000581660 GEMIN7Q9H840 131 aaKnown RBP7.82□□□□□ -1.16
CSNK1D-219ENST00000581660 PMVKQ15126 192 aa7.81□□□□□ -1.16
CSNK1D-219ENST00000581660 CBLN2Q8IUK8 224 aa7.81□□□□□ -1.16
CSNK1D-219ENST00000581660 CDKN2A-AS1Q9UH64 79 aa7.81□□□□□ -1.16
CSNK1D-219ENST00000581660 TINCRA0A1B0GVN0 87 aa7.8□□□□□ -1.16
CSNK1D-219ENST00000581660 PRSS2P07478 247 aa7.8□□□□□ -1.16
CSNK1D-219ENST00000581660 CKS1BP61024 79 aa7.8□□□□□ -1.16
CSNK1D-219ENST00000581660 C6orf226Q5I0X4 101 aa7.8□□□□□ -1.16
CSNK1D-219ENST00000581660 MRPL55Q7Z7F7 128 aaKnown RBP7.8□□□□□ -1.16
CSNK1D-219ENST00000581660 USH2AO75445 5202 aa7.79□□□□□ -1.16
CSNK1D-219ENST00000581660 BAGE3Q86Y29 109 aa7.79□□□□□ -1.16
CSNK1D-219ENST00000581660 Q8IZM0 81 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms