RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 RPL18AQ02543 176 aaKnown RBP2.44□□□□□ -2.02
DDX42-211ENST00000580108 SPAG11BQ08648 103 aa2.44□□□□□ -2.02
DDX42-211ENST00000580108 KIAA1644Q3SXP7 199 aa2.44□□□□□ -2.02
DDX42-211ENST00000580108 C9orf116Q5BN46 136 aaPredicted RBP2.44□□□□□ -2.02
DDX42-211ENST00000580108 C2orf82Q6UX34 121 aa2.44□□□□□ -2.02
DDX42-211ENST00000580108 UNQ6190/PRO20217Q6UXQ8 127 aa2.44□□□□□ -2.02
DDX42-211ENST00000580108 TMEM136Q6ZRR5 245 aa2.44□□□□□ -2.02
DDX42-211ENST00000580108 LINC00173Q6ZV60 143 aa2.44□□□□□ -2.02
DDX42-211ENST00000580108 CAMK2N2Q96S95 79 aa2.44□□□□□ -2.02
DDX42-211ENST00000580108 IMMP2LQ96T52 175 aa2.44□□□□□ -2.02
DDX42-211ENST00000580108 KIR2DL4Q99706 377 aa2.44□□□□□ -2.02
DDX42-211ENST00000580108 TNXBP22105 4242 aa2.44□□□□□ -2.02
DDX42-211ENST00000580108 IGHV3OR16-9A0A0B4J2B5 98 aa2.43□□□□□ -2.02
DDX42-211ENST00000580108 LOC107984640A0A0U1RRK4 108 aa2.43□□□□□ -2.02
DDX42-211ENST00000580108 C1orf196B1AJZ1 125 aa2.43□□□□□ -2.02
DDX42-211ENST00000580108 PPP1R2P9O14990 202 aa2.43□□□□□ -2.02
DDX42-211ENST00000580108 RPL32P62910 135 aaKnown RBP2.43□□□□□ -2.02
DDX42-211ENST00000580108 KIAA0087Q14695 138 aa2.43□□□□□ -2.02
DDX42-211ENST00000580108 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
DDX42-211ENST00000580108 LINC00242Q5T6M2 205 aa2.43□□□□□ -2.02
DDX42-211ENST00000580108 FAM19A5Q7Z5A7 132 aaPredicted RBP2.43□□□□□ -2.02
DDX42-211ENST00000580108 ORMDL3Q8N138 153 aa2.43□□□□□ -2.02
DDX42-211ENST00000580108 C7orf33Q8WU49 177 aa2.43□□□□□ -2.02
DDX42-211ENST00000580108 C20orf78Q9BR46 151 aa2.43□□□□□ -2.02
DDX42-211ENST00000580108 TIMM21Q9BVV7 248 aa2.43□□□□□ -2.02
DDX42-211ENST00000580108 C6orf48Q9UBA6 75 aa2.43□□□□□ -2.02
DDX42-211ENST00000580108 IGLV5-45A0A087WSX0 123 aa2.42□□□□□ -2.02
DDX42-211ENST00000580108 A0A1B0GW15 77 aa2.42□□□□□ -2.02
DDX42-211ENST00000580108 LINC00862A6NCI5 91 aa2.42□□□□□ -2.02
DDX42-211ENST00000580108 F8W036 122 aa2.42□□□□□ -2.02
DDX42-211ENST00000580108 APOMO95445 188 aa2.42□□□□□ -2.02
DDX42-211ENST00000580108 PPP1R17O96001 155 aa2.42□□□□□ -2.02
DDX42-211ENST00000580108 IFI27P40305 119 aaPredicted RBP2.42□□□□□ -2.02
DDX42-211ENST00000580108 UBE2D1P51668 147 aa2.42□□□□□ -2.02
DDX42-211ENST00000580108 MRPS36P82909 103 aaKnown RBP2.42□□□□□ -2.02
DDX42-211ENST00000580108 SRSF9Q13242 221 aaKnown RBP eCLIP2.42□□□□□ -2.02
DDX42-211ENST00000580108 Q6ZRP5 223 aa2.42□□□□□ -2.02
DDX42-211ENST00000580108 LINC00469Q8N7U9 141 aa2.42□□□□□ -2.02
DDX42-211ENST00000580108 Q8N8P6 123 aa2.42□□□□□ -2.02
DDX42-211ENST00000580108 MAP1LC3AQ9H492 121 aa2.42□□□□□ -2.02
DDX42-211ENST00000580108 SPANXA1Q9NS26 97 aa2.42□□□□□ -2.02
DDX42-211ENST00000580108 PSORS1C2Q9UIG4 136 aa2.42□□□□□ -2.02
DDX42-211ENST00000580108 CSDC2Q9Y534 153 aaKnown RBP2.42□□□□□ -2.02
DDX42-211ENST00000580108 NDUFA1O15239 70 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 PPBPP02775 128 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 MT-ND4LP03901 98 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 S100A8P05109 93 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 RAB5AP20339 215 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 KRTAP10-8P60410 259 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 RPL24P83731 157 aaKnown RBP2.41□□□□□ -2.02
DDX42-211ENST00000580108 C1orf137Q5JT78 98 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 CLLU1Q5K131 121 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 C9orf129Q5T035 196 aaKnown RBP2.41□□□□□ -2.02
DDX42-211ENST00000580108 C2orf66Q6UXQ4 117 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 ATP5L2Q7Z4Y8 100 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 COMMD7Q86VX2 200 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 TMEM141Q96I45 108 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 C2orf48Q96LS8 159 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 SMDT1Q9H4I9 107 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 TOMM7Q9P0U1 55 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 LRP2P98164 4655 aa2.41□□□□□ -2.02
DDX42-211ENST00000580108 A0A087WZ39 114 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 TGIF2-C20orf24A0A0A6YYL0 155 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 TMEM218A2RU14 115 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 IGIPA6NJ69 53 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 KRTAP16-1A8MUX0 517 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 SCO1O75880 301 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 MT-ND6P03923 174 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 RAB14P61106 215 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 SMAGPQ0VAQ4 97 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 TEX43Q6ZNM6 134 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 NOTCH2NLQ7Z3S9 236 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 OR10D4PQ8NGN7 298 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 LINC01600Q96MT4 127 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 AMELXQ99217 191 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 XAGE1AQ9HD64 81 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 MRPL35Q9NZE8 188 aaKnown RBP2.4□□□□□ -2.03
DDX42-211ENST00000580108 CDKN2A-AS1Q9UH64 79 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 CYSLTR1Q9Y271 337 aa2.4□□□□□ -2.03
DDX42-211ENST00000580108 A0A096LNJ9 63 aa2.39□□□□□ -2.03
DDX42-211ENST00000580108 M0QXV9 152 aa2.39□□□□□ -2.03
DDX42-211ENST00000580108 ATP6V1G1O75348 118 aa2.39□□□□□ -2.03
DDX42-211ENST00000580108 SPINK8P0C7L1 97 aa2.39□□□□□ -2.03
DDX42-211ENST00000580108 PMCHL1Q16048 86 aa2.39□□□□□ -2.03
DDX42-211ENST00000580108 LBHQ53QV2 105 aaPredicted RBP2.39□□□□□ -2.03
DDX42-211ENST00000580108 SPINK6Q6UWN8 80 aa2.39□□□□□ -2.03
DDX42-211ENST00000580108 ALKBH7Q9BT30 221 aaPredicted RBP2.39□□□□□ -2.03
DDX42-211ENST00000580108 VCX2Q9H322 139 aa2.39□□□□□ -2.03
DDX42-211ENST00000580108 LINC00474Q9P2X8 69 aa2.39□□□□□ -2.03
DDX42-211ENST00000580108 PYGO1Q9Y3Y4 419 aa2.39□□□□□ -2.03
DDX42-211ENST00000580108 FAT4Q6V0I7 4981 aa2.39□□□□□ -2.03
DDX42-211ENST00000580108 IGLV7-43P04211 117 aa2.38□□□□□ -2.03
DDX42-211ENST00000580108 KRTAP1-4P0C5Y4 121 aa2.38□□□□□ -2.03
DDX42-211ENST00000580108 TLX1NBP0CAT3 122 aa2.38□□□□□ -2.03
DDX42-211ENST00000580108 ORMDL2Q53FV1 153 aa2.38□□□□□ -2.03
DDX42-211ENST00000580108 LCE3AQ5TA76 89 aa2.38□□□□□ -2.03
DDX42-211ENST00000580108 REG3GQ6UW15 175 aa2.38□□□□□ -2.03
DDX42-211ENST00000580108 TOMM6Q96B49 74 aa2.38□□□□□ -2.03
DDX42-211ENST00000580108 SCGB3A1Q96QR1 104 aa2.38□□□□□ -2.03
DDX42-211ENST00000580108 RPS10P5Q9NQ39 176 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms