RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 CNBPP62633 177 aaKnown RBP7.38□□□□□ -1.23
CDK5RAP3-210ENST00000578733 SCGB1D1O95968 90 aa7.37□□□□□ -1.23
CDK5RAP3-210ENST00000578733 SYCNQ0VAF6 134 aa7.37□□□□□ -1.23
CDK5RAP3-210ENST00000578733 CARD19Q96LW7 228 aa7.37□□□□□ -1.23
CDK5RAP3-210ENST00000578733 IGLV5-39A0A0G2JS06 123 aa7.36□□□□□ -1.23
CDK5RAP3-210ENST00000578733 A0A1B0GVY2 172 aa7.36□□□□□ -1.23
CDK5RAP3-210ENST00000578733 TRBV30A0A0K0K1B3 111 aa7.35□□□□□ -1.23
CDK5RAP3-210ENST00000578733 HSBP1L1C9JCN9 74 aa7.35□□□□□ -1.23
CDK5RAP3-210ENST00000578733 KIAA0087Q14695 138 aa7.35□□□□□ -1.23
CDK5RAP3-210ENST00000578733 PLEKHB2Q96CS7 222 aa7.35□□□□□ -1.23
CDK5RAP3-210ENST00000578733 LINC00526Q96FQ7 95 aa7.35□□□□□ -1.23
CDK5RAP3-210ENST00000578733 LEPROTO15243 131 aa7.34□□□□□ -1.23
CDK5RAP3-210ENST00000578733 LGALS3P17931 250 aaKnown RBP7.34□□□□□ -1.23
CDK5RAP3-210ENST00000578733 GCSHP23434 173 aa7.34□□□□□ -1.23
CDK5RAP3-210ENST00000578733 RNF151Q2KHN1 245 aa7.34□□□□□ -1.23
CDK5RAP3-210ENST00000578733 C9orf163Q8N9P6 203 aa7.34□□□□□ -1.23
CDK5RAP3-210ENST00000578733 C16orf90A8MZG2 172 aa7.33□□□□□ -1.24
CDK5RAP3-210ENST00000578733 E9PLD3 99 aa7.33□□□□□ -1.24
CDK5RAP3-210ENST00000578733 KRTAP10-2P60368 255 aa7.33□□□□□ -1.24
CDK5RAP3-210ENST00000578733 Q6ZRU5 148 aa7.33□□□□□ -1.24
CDK5RAP3-210ENST00000578733 NMUP48645 174 aa7.32□□□□□ -1.24
CDK5RAP3-210ENST00000578733 LOC107984640A0A0U1RRK4 108 aa7.31□□□□□ -1.24
CDK5RAP3-210ENST00000578733 MYMXA0A1B0GTQ4 84 aa7.31□□□□□ -1.24
CDK5RAP3-210ENST00000578733 LINC00587B1AMM8 73 aa7.31□□□□□ -1.24
CDK5RAP3-210ENST00000578733 J3QQQ9 107 aa7.31□□□□□ -1.24
CDK5RAP3-210ENST00000578733 HERV-K104P63124 156 aa7.31□□□□□ -1.24
CDK5RAP3-210ENST00000578733 JOSD1Q15040 202 aaPredicted RBP7.31□□□□□ -1.24
CDK5RAP3-210ENST00000578733 C2orf82Q6UX34 121 aa7.31□□□□□ -1.24
CDK5RAP3-210ENST00000578733 UNQ6190/PRO20217Q6UXQ8 127 aa7.31□□□□□ -1.24
CDK5RAP3-210ENST00000578733 ATOH7Q8N100 152 aa7.31□□□□□ -1.24
CDK5RAP3-210ENST00000578733 SLPIP03973 132 aa7.3□□□□□ -1.24
CDK5RAP3-210ENST00000578733 STPG4Q8N801 248 aa7.3□□□□□ -1.24
CDK5RAP3-210ENST00000578733 C6orf48Q9UBA6 75 aa7.3□□□□□ -1.24
CDK5RAP3-210ENST00000578733 NDUFA12Q9UI09 145 aa7.3□□□□□ -1.24
CDK5RAP3-210ENST00000578733 RPL18AQ02543 176 aaKnown RBP7.29□□□□□ -1.24
CDK5RAP3-210ENST00000578733 LINC00474Q9P2X8 69 aa7.29□□□□□ -1.24
CDK5RAP3-210ENST00000578733 DNAH8Q96JB1 4490 aa7.29□□□□□ -1.24
CDK5RAP3-210ENST00000578733 LOC105371267A0A1B0GV96 52 aa7.28□□□□□ -1.24
CDK5RAP3-210ENST00000578733 NDUFC2-KCTD14E9PQ53 114 aa7.28□□□□□ -1.24
CDK5RAP3-210ENST00000578733 TLX1NBP0CAT3 122 aa7.28□□□□□ -1.24
CDK5RAP3-210ENST00000578733 FUSP35637 526 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDK5RAP3-210ENST00000578733 COX17Q14061 63 aa7.28□□□□□ -1.24
CDK5RAP3-210ENST00000578733 MEIG1Q5JSS6 88 aa7.28□□□□□ -1.24
CDK5RAP3-210ENST00000578733 C10orf25Q5T742 122 aa7.28□□□□□ -1.24
CDK5RAP3-210ENST00000578733 HSPG2P98160 4391 aa7.27□□□□□ -1.24
CDK5RAP3-210ENST00000578733 CIRBPQ14011 172 aaKnown RBP7.27□□□□□ -1.25
CDK5RAP3-210ENST00000578733 ZNF625Q96I27 306 aaPredicted RBP7.27□□□□□ -1.25
CDK5RAP3-210ENST00000578733 VAMP8Q9BV40 100 aa7.27□□□□□ -1.25
CDK5RAP3-210ENST00000578733 ERG28Q9UKR5 140 aa7.27□□□□□ -1.25
CDK5RAP3-210ENST00000578733 LRP1BQ9NZR2 4599 aa7.27□□□□□ -1.25
CDK5RAP3-210ENST00000578733 GAGE2BQ13066 116 aa7.26□□□□□ -1.25
CDK5RAP3-210ENST00000578733 LINC01620Q4KN68 170 aa7.26□□□□□ -1.25
CDK5RAP3-210ENST00000578733 PYY3Q5JQD4 70 aa7.26□□□□□ -1.25
CDK5RAP3-210ENST00000578733 SDIM1Q6ZPB5 146 aa7.26□□□□□ -1.25
CDK5RAP3-210ENST00000578733 DPH3Q96FX2 82 aa7.26□□□□□ -1.25
CDK5RAP3-210ENST00000578733 KRTAP4-5Q9BYR2 181 aa7.26□□□□□ -1.25
CDK5RAP3-210ENST00000578733 ZNF815PA8K554 130 aa7.25□□□□□ -1.25
CDK5RAP3-210ENST00000578733 TSPEAR-AS2P59090 65 aa7.25□□□□□ -1.25
CDK5RAP3-210ENST00000578733 ANKRD39Q53RE8 183 aa7.25□□□□□ -1.25
CDK5RAP3-210ENST00000578733 IGKV2D-26A0A0A0MRZ7 120 aa7.24□□□□□ -1.25
CDK5RAP3-210ENST00000578733 IGKV2-24A0A0C4DH68 120 aa7.24□□□□□ -1.25
CDK5RAP3-210ENST00000578733 PFN2P35080 140 aa7.24□□□□□ -1.25
CDK5RAP3-210ENST00000578733 PTTG1IPP53801 180 aa7.24□□□□□ -1.25
CDK5RAP3-210ENST00000578733 LINC00158P58513 81 aa7.24□□□□□ -1.25
CDK5RAP3-210ENST00000578733 KRTAP10-1P60331 282 aa7.24□□□□□ -1.25
CDK5RAP3-210ENST00000578733 S100A12P80511 92 aa7.24□□□□□ -1.25
CDK5RAP3-210ENST00000578733 GAGE2EQ4V326 116 aa7.24□□□□□ -1.25
CDK5RAP3-210ENST00000578733 C9orf116Q5BN46 136 aaPredicted RBP7.24□□□□□ -1.25
CDK5RAP3-210ENST00000578733 SCGB1D4Q6XE38 83 aa7.24□□□□□ -1.25
CDK5RAP3-210ENST00000578733 GAGE2DQ9UEU5 116 aa7.24□□□□□ -1.25
CDK5RAP3-210ENST00000578733 MAJINQ3KP22 176 aa7.23□□□□□ -1.25
CDK5RAP3-210ENST00000578733 SPATA45Q537H7 98 aa7.23□□□□□ -1.25
CDK5RAP3-210ENST00000578733 Q6ZRP5 223 aa7.23□□□□□ -1.25
CDK5RAP3-210ENST00000578733 A0A096LNI7 61 aa7.22□□□□□ -1.25
CDK5RAP3-210ENST00000578733 PAM16Q9Y3D7 125 aa7.22□□□□□ -1.25
CDK5RAP3-210ENST00000578733 HERC1Q15751 4861 aa7.22□□□□□ -1.25
CDK5RAP3-210ENST00000578733 A0A0J9YXY3 114 aa7.21□□□□□ -1.26
CDK5RAP3-210ENST00000578733 TMEM238C9JI98 176 aa7.21□□□□□ -1.26
CDK5RAP3-210ENST00000578733 TIMM17BO60830 172 aa7.21□□□□□ -1.26
CDK5RAP3-210ENST00000578733 SMIM13P0DJ93 91 aa7.21□□□□□ -1.26
CDK5RAP3-210ENST00000578733 SPACA4Q8TDM5 124 aa7.21□□□□□ -1.26
CDK5RAP3-210ENST00000578733 A0A0U1RRA0 63 aa7.2□□□□□ -1.26
CDK5RAP3-210ENST00000578733 CDK2AP2O75956 126 aa7.2□□□□□ -1.26
CDK5RAP3-210ENST00000578733 Q6ZSA8 131 aa7.2□□□□□ -1.26
CDK5RAP3-210ENST00000578733 COPS9Q8WXC6 57 aa7.2□□□□□ -1.26
CDK5RAP3-210ENST00000578733 MIEN1Q9BRT3 115 aa7.2□□□□□ -1.26
CDK5RAP3-210ENST00000578733 CHTF8P0CG12 524 aa7.19□□□□□ -1.26
CDK5RAP3-210ENST00000578733 SMIM6P0DI80 62 aa7.19□□□□□ -1.26
CDK5RAP3-210ENST00000578733 COX8AP10176 69 aa7.19□□□□□ -1.26
CDK5RAP3-210ENST00000578733 PCP2Q8IVA1 136 aa7.19□□□□□ -1.26
CDK5RAP3-210ENST00000578733 APOBP04114 4563 aaKnown RBP7.19□□□□□ -1.26
CDK5RAP3-210ENST00000578733 RPL24P83731 157 aaKnown RBP7.18□□□□□ -1.26
CDK5RAP3-210ENST00000578733 Q6ZVH6 145 aa7.18□□□□□ -1.26
CDK5RAP3-210ENST00000578733 MIR7-3HGQ8N6C7 128 aa7.18□□□□□ -1.26
CDK5RAP3-210ENST00000578733 TTTY13Q9BZ97 58 aa7.18□□□□□ -1.26
CDK5RAP3-210ENST00000578733 SND1-IT1Q9HBX3 110 aa7.18□□□□□ -1.26
CDK5RAP3-210ENST00000578733 XAGE1AQ9HD64 81 aa7.18□□□□□ -1.26
CDK5RAP3-210ENST00000578733 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.18□□□□□ -1.26
CDK5RAP3-210ENST00000578733 DLEU1O43261 78 aa7.17□□□□□ -1.26
CDK5RAP3-210ENST00000578733 SLC25A34Q6PIV7 304 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms