RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 ADAMTSL4-AS1Q5T5F5 129 aa8.67□□□□□ -1.02
CTC1-203ENST00000578240 C6orf223Q8N319 242 aa8.67□□□□□ -1.02
CTC1-203ENST00000578240 SPANXB1Q9NS25 103 aaPredicted RBP8.67□□□□□ -1.02
CTC1-203ENST00000578240 C10orf25Q5T742 122 aa8.65□□□□□ -1.02
CTC1-203ENST00000578240 EIF4EBP3O60516 100 aaPredicted RBP8.65□□□□□ -1.03
CTC1-203ENST00000578240 APOMO95445 188 aa8.65□□□□□ -1.03
CTC1-203ENST00000578240 FXYD2P54710 66 aa8.65□□□□□ -1.03
CTC1-203ENST00000578240 HIGD2BQ4VC39 106 aa8.65□□□□□ -1.03
CTC1-203ENST00000578240 Q6ZRN7 208 aaPredicted RBP8.65□□□□□ -1.03
CTC1-203ENST00000578240 FRAS1Q86XX4 4008 aa8.65□□□□□ -1.03
CTC1-203ENST00000578240 GVQW2A0A096LPI5 108 aaPredicted RBP8.64□□□□□ -1.03
CTC1-203ENST00000578240 HERV-K104P63124 156 aa8.64□□□□□ -1.03
CTC1-203ENST00000578240 WFDC2Q14508 124 aa8.64□□□□□ -1.03
CTC1-203ENST00000578240 C6orf226Q5I0X4 101 aa8.64□□□□□ -1.03
CTC1-203ENST00000578240 DAND5Q8N907 189 aa8.64□□□□□ -1.03
CTC1-203ENST00000578240 NTN5Q8WTR8 489 aaPredicted RBP8.64□□□□□ -1.03
CTC1-203ENST00000578240 LINC00476Q8WZB0 136 aa8.64□□□□□ -1.03
CTC1-203ENST00000578240 TIMM17BO60830 172 aa8.63□□□□□ -1.03
CTC1-203ENST00000578240 PRSS2P07478 247 aa8.63□□□□□ -1.03
CTC1-203ENST00000578240 TAL2Q16559 108 aa8.63□□□□□ -1.03
CTC1-203ENST00000578240 TTC32Q5I0X7 151 aa8.63□□□□□ -1.03
CTC1-203ENST00000578240 Q6ZR54 194 aa8.63□□□□□ -1.03
CTC1-203ENST00000578240 CEND1Q8N111 149 aa8.63□□□□□ -1.03
CTC1-203ENST00000578240 RMI2Q96E14 147 aa8.63□□□□□ -1.03
CTC1-203ENST00000578240 TM2D2Q9BX73 214 aa8.63□□□□□ -1.03
CTC1-203ENST00000578240 TMEM238C9JI98 176 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 M0R143 59 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 SMIM13P0DJ93 91 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 HIST1H4GQ99525 98 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 SPANXDQ9BXN6 97 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 SPANXCQ9NY87 97 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 A0A0U1RRA0 63 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 USP17L23D6RBM5 183 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 LY6G6CO95867 125 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 GCSHP23434 173 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 CXCL5P42830 114 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 BATFQ16520 125 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 C9orf116Q5BN46 136 aaPredicted RBP8.62□□□□□ -1.03
CTC1-203ENST00000578240 CFAP161Q6P656 301 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 UNQ6190/PRO20217Q6UXQ8 127 aa8.62□□□□□ -1.03
CTC1-203ENST00000578240 SOSTDC1Q6X4U4 206 aa8.61□□□□□ -1.03
CTC1-203ENST00000578240 DNAH17Q9UFH2 4485 aa8.6□□□□□ -1.03
CTC1-203ENST00000578240 M0R2N4 97 aa8.6□□□□□ -1.03
CTC1-203ENST00000578240 LECT2O14960 151 aa8.6□□□□□ -1.03
CTC1-203ENST00000578240 CKS1BP61024 79 aa8.6□□□□□ -1.03
CTC1-203ENST00000578240 MEIG1Q5JSS6 88 aa8.6□□□□□ -1.03
CTC1-203ENST00000578240 SFTA2Q6UW10 78 aa8.6□□□□□ -1.03
CTC1-203ENST00000578240 C6orf48Q9UBA6 75 aa8.6□□□□□ -1.03
CTC1-203ENST00000578240 ERG28Q9UKR5 140 aa8.6□□□□□ -1.03
CTC1-203ENST00000578240 COX11Q9Y6N1 276 aa8.6□□□□□ -1.03
CTC1-203ENST00000578240 SLPIP03973 132 aa8.59□□□□□ -1.03
CTC1-203ENST00000578240 SRSF9Q13242 221 aaKnown RBP eCLIP8.59□□□□□ -1.03
CTC1-203ENST00000578240 NPC2P61916 151 aa8.59□□□□□ -1.03
CTC1-203ENST00000578240 Q6ZRU5 148 aa8.59□□□□□ -1.03
CTC1-203ENST00000578240 MUSTN1Q8IVN3 82 aa8.58□□□□□ -1.04
CTC1-203ENST00000578240 MIR7-3HGQ8N6C7 128 aa8.58□□□□□ -1.04
CTC1-203ENST00000578240 C2orf48Q96LS8 159 aa8.58□□□□□ -1.04
CTC1-203ENST00000578240 ZNF561-AS1K7EIQ3 104 aa8.57□□□□□ -1.04
CTC1-203ENST00000578240 PFN2P35080 140 aa8.57□□□□□ -1.04
CTC1-203ENST00000578240 LINC00308Q8TCZ7 52 aa8.57□□□□□ -1.04
CTC1-203ENST00000578240 LRCOL1A6NCL2 159 aa8.56□□□□□ -1.04
CTC1-203ENST00000578240 K7ERJ3 54 aa8.56□□□□□ -1.04
CTC1-203ENST00000578240 PTTG1IPP53801 180 aa8.56□□□□□ -1.04
CTC1-203ENST00000578240 Q6ZVH6 145 aa8.56□□□□□ -1.04
CTC1-203ENST00000578240 CAMK2N2Q96S95 79 aa8.56□□□□□ -1.04
CTC1-203ENST00000578240 HECTD4Q9Y4D8 3996 aa8.56□□□□□ -1.04
CTC1-203ENST00000578240 A0A1B0GWB2 263 aa8.56□□□□□ -1.04
CTC1-203ENST00000578240 TRBV30A0A0K0K1B3 111 aa8.55□□□□□ -1.04
CTC1-203ENST00000578240 A4D1N5 150 aa8.55□□□□□ -1.04
CTC1-203ENST00000578240 CIRBPQ14011 172 aaKnown RBP8.55□□□□□ -1.04
CTC1-203ENST00000578240 NHP2Q9NX24 153 aaKnown RBP8.55□□□□□ -1.04
CTC1-203ENST00000578240 LINC00158P58513 81 aa8.54□□□□□ -1.04
CTC1-203ENST00000578240 PSCAO43653 123 aa8.53□□□□□ -1.04
CTC1-203ENST00000578240 IFITM1P13164 125 aa8.53□□□□□ -1.04
CTC1-203ENST00000578240 COX17Q14061 63 aa8.53□□□□□ -1.04
CTC1-203ENST00000578240 PPDPFQ9H3Y8 114 aa8.53□□□□□ -1.04
CTC1-203ENST00000578240 FAT2Q9NYQ8 4349 aa8.53□□□□□ -1.04
CTC1-203ENST00000578240 TAX1BP3O14907 124 aa8.53□□□□□ -1.04
CTC1-203ENST00000578240 SYCNQ0VAF6 134 aa8.53□□□□□ -1.04
CTC1-203ENST00000578240 COL5A1-AS1Q5SY13 56 aa8.53□□□□□ -1.04
CTC1-203ENST00000578240 Q8NDZ9 215 aa8.53□□□□□ -1.04
CTC1-203ENST00000578240 EPPK1P58107 5090 aaKnown RBP8.52□□□□□ -1.04
CTC1-203ENST00000578240 F8WDY8 70 aa8.52□□□□□ -1.05
CTC1-203ENST00000578240 CFC1BP0CG36 223 aa8.52□□□□□ -1.05
CTC1-203ENST00000578240 CFC1P0CG37 223 aa8.52□□□□□ -1.05
CTC1-203ENST00000578240 LBHQ53QV2 105 aaPredicted RBP8.52□□□□□ -1.05
CTC1-203ENST00000578240 CARD19Q96LW7 228 aa8.52□□□□□ -1.05
CTC1-203ENST00000578240 DNAH11Q96DT5 4516 aa8.52□□□□□ -1.05
CTC1-203ENST00000578240 LOC107984156A0A0G2JMH3 177 aa8.51□□□□□ -1.05
CTC1-203ENST00000578240 RPL24P83731 157 aaKnown RBP8.51□□□□□ -1.05
CTC1-203ENST00000578240 ARL17AQ8IVW1 177 aa8.51□□□□□ -1.05
CTC1-203ENST00000578240 SND1-IT1Q9HBX3 110 aa8.51□□□□□ -1.05
CTC1-203ENST00000578240 A6NDN8 102 aa8.5□□□□□ -1.05
CTC1-203ENST00000578240 TMEM238LA0A1B0GVL6 79 aa8.49□□□□□ -1.05
CTC1-203ENST00000578240 A6NJY4 79 aa8.49□□□□□ -1.05
CTC1-203ENST00000578240 IGKV2-28A0A075B6P5 120 aa8.49□□□□□ -1.05
CTC1-203ENST00000578240 A0A0B4J2C4 111 aa8.49□□□□□ -1.05
CTC1-203ENST00000578240 IGKV2D-28P01615 120 aa8.49□□□□□ -1.05
CTC1-203ENST00000578240 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
CTC1-203ENST00000578240 Q6ZRP5 223 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms