RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 Q6ZRU5 148 aa7.96□□□□□ -1.14
RARA-208ENST00000577646 APOBP04114 4563 aaKnown RBP7.96□□□□□ -1.14
RARA-208ENST00000577646 C11orf86A6NJI1 115 aa7.95□□□□□ -1.14
RARA-208ENST00000577646 TLX1NBP0CAT3 122 aa7.95□□□□□ -1.14
RARA-208ENST00000577646 TMEM170BQ5T4T1 132 aa7.95□□□□□ -1.14
RARA-208ENST00000577646 COX7B2Q8TF08 81 aa7.95□□□□□ -1.14
RARA-208ENST00000577646 LINC00526Q96FQ7 95 aa7.95□□□□□ -1.14
RARA-208ENST00000577646 DPM2O94777 84 aa7.94□□□□□ -1.14
RARA-208ENST00000577646 S100A6P06703 90 aa7.94□□□□□ -1.14
RARA-208ENST00000577646 PET117Q6UWS5 81 aa7.94□□□□□ -1.14
RARA-208ENST00000577646 Q8N1X5 172 aa7.94□□□□□ -1.14
RARA-208ENST00000577646 TOMM7Q9P0U1 55 aa7.94□□□□□ -1.14
RARA-208ENST00000577646 HERC1Q15751 4861 aa7.94□□□□□ -1.14
RARA-208ENST00000577646 SYS1-DBNDD2H3BUS1 97 aa7.93□□□□□ -1.14
RARA-208ENST00000577646 SPINK8P0C7L1 97 aa7.93□□□□□ -1.14
RARA-208ENST00000577646 XGP55808 180 aa7.93□□□□□ -1.14
RARA-208ENST00000577646 LINC01620Q4KN68 170 aa7.93□□□□□ -1.14
RARA-208ENST00000577646 UNQ6190/PRO20217Q6UXQ8 127 aa7.93□□□□□ -1.14
RARA-208ENST00000577646 FAM30AQ9NZY2 134 aa7.93□□□□□ -1.14
RARA-208ENST00000577646 TMEM223A0PJW6 202 aa7.92□□□□□ -1.14
RARA-208ENST00000577646 H0Y8G0 127 aa7.91□□□□□ -1.14
RARA-208ENST00000577646 IGKCP01834 107 aa7.91□□□□□ -1.14
RARA-208ENST00000577646 DPH3Q96FX2 82 aa7.91□□□□□ -1.14
RARA-208ENST00000577646 C6orf48Q9UBA6 75 aa7.91□□□□□ -1.14
RARA-208ENST00000577646 NDUFC2-KCTD14E9PQ53 114 aa7.9□□□□□ -1.14
RARA-208ENST00000577646 S100A2P29034 98 aa7.9□□□□□ -1.14
RARA-208ENST00000577646 PTTG1IPP53801 180 aa7.9□□□□□ -1.14
RARA-208ENST00000577646 HERVK_113P61574 105 aa7.9□□□□□ -1.14
RARA-208ENST00000577646 C10orf25Q5T742 122 aa7.9□□□□□ -1.14
RARA-208ENST00000577646 LINC01545Q5VT33 79 aa7.9□□□□□ -1.14
RARA-208ENST00000577646 C2orf82Q6UX34 121 aa7.9□□□□□ -1.14
RARA-208ENST00000577646 SPACA4Q8TDM5 124 aa7.9□□□□□ -1.14
RARA-208ENST00000577646 C20orf202A1L168 122 aa7.89□□□□□ -1.15
RARA-208ENST00000577646 COX17Q14061 63 aa7.89□□□□□ -1.15
RARA-208ENST00000577646 CIRBP-AS1Q8TBR5 109 aa7.89□□□□□ -1.15
RARA-208ENST00000577646 PLAC8Q9NZF1 115 aa7.89□□□□□ -1.15
RARA-208ENST00000577646 A0A096LNI7 61 aa7.88□□□□□ -1.15
RARA-208ENST00000577646 LINC00587B1AMM8 73 aa7.88□□□□□ -1.15
RARA-208ENST00000577646 EPM2AB3EWF7 344 aa7.88□□□□□ -1.15
RARA-208ENST00000577646 C3orf79P0CE67 100 aa7.88□□□□□ -1.15
RARA-208ENST00000577646 SCXQ7RTU7 201 aa7.88□□□□□ -1.15
RARA-208ENST00000577646 HIST3H2BBQ8N257 126 aa7.88□□□□□ -1.15
RARA-208ENST00000577646 PLEKHB2Q96CS7 222 aa7.88□□□□□ -1.15
RARA-208ENST00000577646 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.88□□□□□ -1.15
RARA-208ENST00000577646 FAM229AH3BQW9 127 aa7.87□□□□□ -1.15
RARA-208ENST00000577646 HERV-K104P63124 156 aa7.87□□□□□ -1.15
RARA-208ENST00000577646 GAGE2BQ13066 116 aa7.87□□□□□ -1.15
RARA-208ENST00000577646 MAJINQ3KP22 176 aa7.87□□□□□ -1.15
RARA-208ENST00000577646 A0A087WYN8 130 aa7.86□□□□□ -1.15
RARA-208ENST00000577646 IGKV2-24A0A0C4DH68 120 aa7.86□□□□□ -1.15
RARA-208ENST00000577646 LEPROTO15243 131 aa7.86□□□□□ -1.15
RARA-208ENST00000577646 NMUP48645 174 aa7.86□□□□□ -1.15
RARA-208ENST00000577646 KRTDAPP60985 99 aa7.86□□□□□ -1.15
RARA-208ENST00000577646 RPL18AQ02543 176 aaKnown RBP7.86□□□□□ -1.15
RARA-208ENST00000577646 HIST1H2BLQ99880 126 aa7.86□□□□□ -1.15
RARA-208ENST00000577646 C5orf52A6NGY3 159 aa7.85□□□□□ -1.15
RARA-208ENST00000577646 SNRPEP62304 92 aaKnown RBP7.85□□□□□ -1.15
RARA-208ENST00000577646 Q6ZRP5 223 aa7.85□□□□□ -1.15
RARA-208ENST00000577646 STPG4Q8N801 248 aa7.85□□□□□ -1.15
RARA-208ENST00000577646 ZNF625Q96I27 306 aaPredicted RBP7.85□□□□□ -1.15
RARA-208ENST00000577646 MYMXA0A1B0GTQ4 84 aa7.84□□□□□ -1.15
RARA-208ENST00000577646 PANO1I0J062 215 aa7.84□□□□□ -1.15
RARA-208ENST00000577646 CHTF8P0CG12 524 aa7.84□□□□□ -1.15
RARA-208ENST00000577646 E9PLD3 99 aa7.83□□□□□ -1.16
RARA-208ENST00000577646 C9orf116Q5BN46 136 aaPredicted RBP7.83□□□□□ -1.16
RARA-208ENST00000577646 PMCHL2Q9BQD1 86 aa7.83□□□□□ -1.16
RARA-208ENST00000577646 J3QQQ9 107 aa7.82□□□□□ -1.16
RARA-208ENST00000577646 SMR3BP02814 79 aaPredicted RBP7.82□□□□□ -1.16
RARA-208ENST00000577646 PLA2G1BP04054 148 aaKnown RBP7.82□□□□□ -1.16
RARA-208ENST00000577646 C7orf33Q8WU49 177 aa7.82□□□□□ -1.16
RARA-208ENST00000577646 NDUFA12Q9UI09 145 aa7.82□□□□□ -1.16
RARA-208ENST00000577646 ERG28Q9UKR5 140 aa7.82□□□□□ -1.16
RARA-208ENST00000577646 SRRM2Q9UQ35 2752 aaKnown RBP7.82□□□□□ -1.16
RARA-208ENST00000577646 FAT1Q14517 4588 aa7.81□□□□□ -1.16
RARA-208ENST00000577646 LGALS3P17931 250 aaKnown RBP7.81□□□□□ -1.16
RARA-208ENST00000577646 GAGE2EQ4V326 116 aa7.81□□□□□ -1.16
RARA-208ENST00000577646 Q5VSD8 79 aa7.81□□□□□ -1.16
RARA-208ENST00000577646 GAGE2DQ9UEU5 116 aa7.81□□□□□ -1.16
RARA-208ENST00000577646 PLA2G2DQ9UNK4 145 aa7.81□□□□□ -1.16
RARA-208ENST00000577646 HAMPP81172 84 aa7.8□□□□□ -1.16
RARA-208ENST00000577646 LINC00528Q8N1L1 170 aa7.8□□□□□ -1.16
RARA-208ENST00000577646 DNAH8Q96JB1 4490 aa7.8□□□□□ -1.16
RARA-208ENST00000577646 INAFM2P0DMQ5 153 aa7.79□□□□□ -1.16
RARA-208ENST00000577646 A0A1W2PNN7 141 aa7.78□□□□□ -1.16
RARA-208ENST00000577646 PFN2P35080 140 aa7.78□□□□□ -1.16
RARA-208ENST00000577646 LBHQ53QV2 105 aaPredicted RBP7.78□□□□□ -1.16
RARA-208ENST00000577646 C9orf129Q5T035 196 aaKnown RBP7.78□□□□□ -1.16
RARA-208ENST00000577646 TP73-AS1Q9UF72 201 aa7.78□□□□□ -1.16
RARA-208ENST00000577646 LINC00158P58513 81 aa7.77□□□□□ -1.17
RARA-208ENST00000577646 IGLV5-37A0A075B6J1 123 aa7.76□□□□□ -1.17
RARA-208ENST00000577646 RPL24P83731 157 aaKnown RBP7.76□□□□□ -1.17
RARA-208ENST00000577646 MEIG1Q5JSS6 88 aa7.76□□□□□ -1.17
RARA-208ENST00000577646 SND1-IT1Q9HBX3 110 aa7.76□□□□□ -1.17
RARA-208ENST00000577646 XAGE1AQ9HD64 81 aa7.76□□□□□ -1.17
RARA-208ENST00000577646 HSBP1L1C9JCN9 74 aa7.75□□□□□ -1.17
RARA-208ENST00000577646 TSPEAR-AS2P59090 65 aa7.75□□□□□ -1.17
RARA-208ENST00000577646 RPL37AP61513 92 aaKnown RBP7.75□□□□□ -1.17
RARA-208ENST00000577646 DMBT1Q9UGM3 2413 aaPredicted RBP7.74□□□□□ -1.17
RARA-208ENST00000577646 LOC107984156A0A0G2JMH3 177 aa7.74□□□□□ -1.17
RARA-208ENST00000577646 TIMM17BO60830 172 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms