RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	COX7A2L	O14548	114 aa		10.36	□□□□□ -0.75
PRPF8-216	ENST00000577001	LINC00269	Q8N2A0	174 aa		10.36	□□□□□ -0.75
PRPF8-216	ENST00000577001	DNAL4	O96015	105 aa		10.36	□□□□□ -0.75
PRPF8-216	ENST00000577001	WFDC9	Q8NEX5	89 aa		10.36	□□□□□ -0.75
PRPF8-216	ENST00000577001	ANK3	Q12955	4377 aa	Known RBP	10.36	□□□□□ -0.75
PRPF8-216	ENST00000577001	SDIM1	Q6ZPB5	146 aa		10.36	□□□□□ -0.75
PRPF8-216	ENST00000577001	TRBV6-8	A0A0A6YYG3	113 aa		10.35	□□□□□ -0.75
PRPF8-216	ENST00000577001	KRTAP10-3	P60369	221 aa		10.35	□□□□□ -0.75
PRPF8-216	ENST00000577001	ANG	P03950	147 aa	Known RBP	10.35	□□□□□ -0.75
PRPF8-216	ENST00000577001	NSD1	Q96L73	2696 aa	Predicted RBP	10.35	□□□□□ -0.75
PRPF8-216	ENST00000577001	FAM222A	Q5U5X8	452 aa		10.34	□□□□□ -0.75
PRPF8-216	ENST00000577001		A0A087WVE0	104 aa		10.34	□□□□□ -0.75
PRPF8-216	ENST00000577001	C6orf223	Q8N319	242 aa		10.34	□□□□□ -0.75
PRPF8-216	ENST00000577001	TENM3	Q9P273	2699 aa		10.33	□□□□□ -0.76
PRPF8-216	ENST00000577001	SMIM20	Q8N5G0	67 aa		10.33	□□□□□ -0.76
PRPF8-216	ENST00000577001	KLK5	Q9Y337	293 aa	Predicted RBP	10.33	□□□□□ -0.76
PRPF8-216	ENST00000577001	IGLV5-45	A0A087WSX0	123 aa		10.32	□□□□□ -0.76
PRPF8-216	ENST00000577001	C16orf74	Q96GX8	76 aa		10.32	□□□□□ -0.76
PRPF8-216	ENST00000577001		H3BT86	120 aa		10.32	□□□□□ -0.76
PRPF8-216	ENST00000577001	C19orf73	Q9NVV2	129 aa		10.31	□□□□□ -0.76
PRPF8-216	ENST00000577001	LINC00959	A0A1B0GUT2	108 aa		10.31	□□□□□ -0.76
PRPF8-216	ENST00000577001	TRBV10-1	A0A0K0K1A3	114 aa		10.3	□□□□□ -0.76
PRPF8-216	ENST00000577001	IGLV1-51	P01701	117 aa		10.3	□□□□□ -0.76
PRPF8-216	ENST00000577001	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.29	□□□□□ -0.76
PRPF8-216	ENST00000577001	MGAM2	Q2M2H8	2515 aa		10.28	□□□□□ -0.76
PRPF8-216	ENST00000577001	INAFM1	C9JVW0	142 aa		10.28	□□□□□ -0.76
PRPF8-216	ENST00000577001	MAL	P21145	153 aa		10.28	□□□□□ -0.76
PRPF8-216	ENST00000577001	CSNK1G2-AS1	Q8NCQ2	148 aa		10.28	□□□□□ -0.76
PRPF8-216	ENST00000577001	FAM110A	Q9BQ89	295 aa		10.28	□□□□□ -0.76
PRPF8-216	ENST00000577001	C22orf24	Q9Y442	160 aa		10.28	□□□□□ -0.76
PRPF8-216	ENST00000577001	KRTAP1-1	Q07627	177 aa		10.27	□□□□□ -0.76
PRPF8-216	ENST00000577001	SHISA2	Q6UWI4	295 aa		10.27	□□□□□ -0.76
PRPF8-216	ENST00000577001	CELA1	Q9UNI1	258 aa		10.27	□□□□□ -0.76
PRPF8-216	ENST00000577001	IL17D	Q8TAD2	202 aa		10.27	□□□□□ -0.77
PRPF8-216	ENST00000577001	EDA2R	Q9HAV5	297 aa		10.27	□□□□□ -0.77
PRPF8-216	ENST00000577001	XAGE1A	Q9HD64	81 aa		10.27	□□□□□ -0.77
PRPF8-216	ENST00000577001	HIST1H4A	P62805	103 aa	Known RBP	10.26	□□□□□ -0.77
PRPF8-216	ENST00000577001	C10orf25	Q5T742	122 aa		10.25	□□□□□ -0.77
PRPF8-216	ENST00000577001	TIMM17B	O60830	172 aa		10.25	□□□□□ -0.77
PRPF8-216	ENST00000577001	KLK12	Q9UKR0	248 aa		10.25	□□□□□ -0.77
PRPF8-216	ENST00000577001	TRBV6-4	A0A1B0GX49	114 aa		10.25	□□□□□ -0.77
PRPF8-216	ENST00000577001	RETN	Q9HD89	108 aa		10.25	□□□□□ -0.77
PRPF8-216	ENST00000577001	TRAV25	A0A0B4J276	109 aa		10.24	□□□□□ -0.77
PRPF8-216	ENST00000577001		Q8NDZ9	215 aa		10.24	□□□□□ -0.77
PRPF8-216	ENST00000577001	MRPL23	Q16540	153 aa	Known RBP	10.24	□□□□□ -0.77
PRPF8-216	ENST00000577001	UNQ6190/PRO20217	Q6UXQ8	127 aa		10.24	□□□□□ -0.77
PRPF8-216	ENST00000577001	CSMD3	Q7Z407	3707 aa		10.23	□□□□□ -0.77
PRPF8-216	ENST00000577001	TRAV13-2	A0A0B4J235	113 aa		10.23	□□□□□ -0.77
PRPF8-216	ENST00000577001	CXCL5	P42830	114 aa		10.23	□□□□□ -0.77
PRPF8-216	ENST00000577001	SS18	Q15532	418 aa		10.23	□□□□□ -0.77
PRPF8-216	ENST00000577001	HERV-K104	P63124	156 aa		10.22	□□□□□ -0.77
PRPF8-216	ENST00000577001	HIGD2B	Q4VC39	106 aa		10.22	□□□□□ -0.77
PRPF8-216	ENST00000577001	CFAP161	Q6P656	301 aa		10.22	□□□□□ -0.77
PRPF8-216	ENST00000577001	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.22	□□□□□ -0.77
PRPF8-216	ENST00000577001	LINC00846	Q9NV44	126 aa		10.22	□□□□□ -0.77
PRPF8-216	ENST00000577001	HILS1	P60008	231 aa		10.21	□□□□□ -0.77
PRPF8-216	ENST00000577001	DAD1	P61803	113 aa		10.21	□□□□□ -0.77
PRPF8-216	ENST00000577001	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.21	□□□□□ -0.78
PRPF8-216	ENST00000577001	LY6G6D	O95868	133 aa		10.2	□□□□□ -0.78
PRPF8-216	ENST00000577001	RPL18A	Q02543	176 aa	Known RBP	10.2	□□□□□ -0.78
PRPF8-216	ENST00000577001	CSDC2	Q9Y534	153 aa	Known RBP	10.2	□□□□□ -0.78
PRPF8-216	ENST00000577001		X6R8D5	127 aa		10.2	□□□□□ -0.78
PRPF8-216	ENST00000577001		A0A087WZ39	114 aa		10.2	□□□□□ -0.78
PRPF8-216	ENST00000577001	IGHV4-28	A0A0C4DH34	117 aa		10.2	□□□□□ -0.78
PRPF8-216	ENST00000577001	C6orf99	Q4VX62	202 aa		10.19	□□□□□ -0.78
PRPF8-216	ENST00000577001	LRRC75A-AS1	Q8N1F1	130 aa		10.19	□□□□□ -0.78
PRPF8-216	ENST00000577001	REG3A	Q06141	175 aa		10.19	□□□□□ -0.78
PRPF8-216	ENST00000577001	S100A7L2	Q5SY68	101 aa		10.19	□□□□□ -0.78
PRPF8-216	ENST00000577001	PRB2	P02812	416 aa	Predicted RBP	10.18	□□□□□ -0.78
PRPF8-216	ENST00000577001	C9orf153	Q5TBE3	101 aa		10.18	□□□□□ -0.78
PRPF8-216	ENST00000577001	PRO0255	Q9UI72	69 aa		10.17	□□□□□ -0.78
PRPF8-216	ENST00000577001	RPL28	P46779	137 aa	Known RBP	10.17	□□□□□ -0.78
PRPF8-216	ENST00000577001	OXLD1	Q5BKU9	147 aa		10.17	□□□□□ -0.78
PRPF8-216	ENST00000577001	TMEM86B	Q8N661	226 aa		10.17	□□□□□ -0.78
PRPF8-216	ENST00000577001	TRAC	P01848	142 aa		10.16	□□□□□ -0.78
PRPF8-216	ENST00000577001	SCX	Q7RTU7	201 aa		10.16	□□□□□ -0.78
PRPF8-216	ENST00000577001	OVOL2	Q9BRP0	275 aa		10.16	□□□□□ -0.78
PRPF8-216	ENST00000577001	LOC107984640	A0A0U1RRK4	108 aa		10.15	□□□□□ -0.78
PRPF8-216	ENST00000577001	CYSTM1	Q9H1C7	97 aa		10.15	□□□□□ -0.78
PRPF8-216	ENST00000577001		M0R2N4	97 aa		10.15	□□□□□ -0.78
PRPF8-216	ENST00000577001	hADV29S1	A0JD25	119 aa		10.15	□□□□□ -0.79
PRPF8-216	ENST00000577001	COPS9	Q8WXC6	57 aa		10.15	□□□□□ -0.79
PRPF8-216	ENST00000577001	IBA57-AS1	B1ANH7	110 aa		10.14	□□□□□ -0.79
PRPF8-216	ENST00000577001	LAMTOR3	Q9UHA4	124 aa		10.14	□□□□□ -0.79
PRPF8-216	ENST00000577001	TRAV23DV6	A0A075B6W5	121 aa		10.13	□□□□□ -0.79
PRPF8-216	ENST00000577001	FAM19A1	Q7Z5A9	133 aa		10.13	□□□□□ -0.79
PRPF8-216	ENST00000577001		J3QKU1	62 aa		10.12	□□□□□ -0.79
PRPF8-216	ENST00000577001		A0A1B0GX51	115 aa		10.12	□□□□□ -0.79
PRPF8-216	ENST00000577001	SPAG11B	Q08648	103 aa		10.12	□□□□□ -0.79
PRPF8-216	ENST00000577001		M0QXV9	152 aa		10.11	□□□□□ -0.79
PRPF8-216	ENST00000577001	LINC00643	Q86TS7	51 aa		10.11	□□□□□ -0.79
PRPF8-216	ENST00000577001	CYSRT1	A8MQ03	144 aa		10.11	□□□□□ -0.79
PRPF8-216	ENST00000577001	ORMDL1	Q9P0S3	153 aa		10.11	□□□□□ -0.79
PRPF8-216	ENST00000577001	NANOS2	P60321	138 aa	Known RBP	10.1	□□□□□ -0.79
PRPF8-216	ENST00000577001	INAFM2	P0DMQ5	153 aa		10.09	□□□□□ -0.79
PRPF8-216	ENST00000577001	ENHO	Q6UWT2	76 aa		10.09	□□□□□ -0.79
PRPF8-216	ENST00000577001	HAMP	P81172	84 aa		10.08	□□□□□ -0.8
PRPF8-216	ENST00000577001	TENM2	Q9NT68	2774 aa		10.08	□□□□□ -0.8
PRPF8-216	ENST00000577001	DEFB121	Q5J5C9	76 aa		10.08	□□□□□ -0.8
PRPF8-216	ENST00000577001	WFDC10B	Q8IUB3	73 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms