RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 HIST3H2BBQ8N257 126 aa10□□□□□ -0.81
LITAF-218ENST00000576036 TOMM7Q9P0U1 55 aa10□□□□□ -0.81
LITAF-218ENST00000576036 TMEM223A0PJW6 202 aa9.99□□□□□ -0.81
LITAF-218ENST00000576036 H3BRM9 83 aa9.99□□□□□ -0.81
LITAF-218ENST00000576036 SYS1-DBNDD2H3BUS1 97 aa9.99□□□□□ -0.81
LITAF-218ENST00000576036 NDUFA1O15239 70 aa9.99□□□□□ -0.81
LITAF-218ENST00000576036 RNF151Q2KHN1 245 aa9.99□□□□□ -0.81
LITAF-218ENST00000576036 TMEM170BQ5T4T1 132 aa9.99□□□□□ -0.81
LITAF-218ENST00000576036 COX7B2Q8TF08 81 aa9.99□□□□□ -0.81
LITAF-218ENST00000576036 A0A096LNI7 61 aa9.98□□□□□ -0.81
LITAF-218ENST00000576036 C3orf79P0CE67 100 aa9.98□□□□□ -0.81
LITAF-218ENST00000576036 MAP1LC3CQ9BXW4 147 aa9.98□□□□□ -0.81
LITAF-218ENST00000576036 SCXQ7RTU7 201 aa9.97□□□□□ -0.81
LITAF-218ENST00000576036 PRSS2P07478 247 aa9.96□□□□□ -0.82
LITAF-218ENST00000576036 C9orf116Q5BN46 136 aaPredicted RBP9.96□□□□□ -0.82
LITAF-218ENST00000576036 C6orf226Q5I0X4 101 aa9.96□□□□□ -0.82
LITAF-218ENST00000576036 LINC01545Q5VT33 79 aa9.96□□□□□ -0.82
LITAF-218ENST00000576036 SPACA4Q8TDM5 124 aa9.96□□□□□ -0.82
LITAF-218ENST00000576036 HIST1H2BLQ99880 126 aa9.96□□□□□ -0.82
LITAF-218ENST00000576036 DPM2O94777 84 aa9.95□□□□□ -0.82
LITAF-218ENST00000576036 CIRBP-AS1Q8TBR5 109 aa9.95□□□□□ -0.82
LITAF-218ENST00000576036 TRBV30A0A0K0K1B3 111 aa9.94□□□□□ -0.82
LITAF-218ENST00000576036 LOC107984640A0A0U1RRK4 108 aa9.94□□□□□ -0.82
LITAF-218ENST00000576036 PLNP26678 52 aa9.94□□□□□ -0.82
LITAF-218ENST00000576036 PET117Q6UWS5 81 aa9.94□□□□□ -0.82
LITAF-218ENST00000576036 IGKV2-24A0A0C4DH68 120 aa9.93□□□□□ -0.82
LITAF-218ENST00000576036 C5orf52A6NGY3 159 aa9.93□□□□□ -0.82
LITAF-218ENST00000576036 IGKCP01834 107 aa9.93□□□□□ -0.82
LITAF-218ENST00000576036 TLX1NBP0CAT3 122 aa9.93□□□□□ -0.82
LITAF-218ENST00000576036 CXCL5P42830 114 aa9.93□□□□□ -0.82
LITAF-218ENST00000576036 PTTG1IPP53801 180 aa9.93□□□□□ -0.82
LITAF-218ENST00000576036 KRTDAPP60985 99 aa9.93□□□□□ -0.82
LITAF-218ENST00000576036 CKS1BP61024 79 aa9.93□□□□□ -0.82
LITAF-218ENST00000576036 SNRPEP62304 92 aaKnown RBP9.93□□□□□ -0.82
LITAF-218ENST00000576036 TSPEAR-AS2P59090 65 aa9.92□□□□□ -0.82
LITAF-218ENST00000576036 Q6ZRP5 223 aa9.92□□□□□ -0.82
LITAF-218ENST00000576036 ZNF625Q96I27 306 aaPredicted RBP9.92□□□□□ -0.82
LITAF-218ENST00000576036 S100A6P06703 90 aa9.91□□□□□ -0.82
LITAF-218ENST00000576036 FAT1Q14517 4588 aa9.9□□□□□ -0.82
LITAF-218ENST00000576036 A0A087WYN8 130 aa9.9□□□□□ -0.82
LITAF-218ENST00000576036 RPL18AQ02543 176 aaKnown RBP9.9□□□□□ -0.82
LITAF-218ENST00000576036 GAGE2BQ13066 116 aa9.9□□□□□ -0.82
LITAF-218ENST00000576036 EPM2AB3EWF7 344 aa9.89□□□□□ -0.83
LITAF-218ENST00000576036 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
LITAF-218ENST00000576036 PLAC8Q9NZF1 115 aa9.89□□□□□ -0.83
LITAF-218ENST00000576036 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
LITAF-218ENST00000576036 SMR3BP02814 79 aaPredicted RBP9.88□□□□□ -0.83
LITAF-218ENST00000576036 PKIGQ9Y2B9 76 aa9.88□□□□□ -0.83
LITAF-218ENST00000576036 A0A1W2PNN7 141 aa9.87□□□□□ -0.83
LITAF-218ENST00000576036 LEPROTO15243 131 aa9.87□□□□□ -0.83
LITAF-218ENST00000576036 S100A2P29034 98 aa9.87□□□□□ -0.83
LITAF-218ENST00000576036 C9orf129Q5T035 196 aaKnown RBP9.87□□□□□ -0.83
LITAF-218ENST00000576036 KRTAP7-1Q8IUC3 87 aa9.87□□□□□ -0.83
LITAF-218ENST00000576036 KRTAP4-5Q9BYR2 181 aa9.87□□□□□ -0.83
LITAF-218ENST00000576036 GAGE2EQ4V326 116 aa9.86□□□□□ -0.83
LITAF-218ENST00000576036 Q8N1X5 172 aa9.86□□□□□ -0.83
LITAF-218ENST00000576036 STPG4Q8N801 248 aa9.86□□□□□ -0.83
LITAF-218ENST00000576036 GAGE2DQ9UEU5 116 aa9.86□□□□□ -0.83
LITAF-218ENST00000576036 FAM168BA1KXE4 195 aa9.84□□□□□ -0.83
LITAF-218ENST00000576036 E9PLD3 99 aa9.84□□□□□ -0.83
LITAF-218ENST00000576036 ATOH7Q8N100 152 aa9.84□□□□□ -0.83
LITAF-218ENST00000576036 PLEKHB2Q96CS7 222 aa9.84□□□□□ -0.83
LITAF-218ENST00000576036 LINC00474Q9P2X8 69 aa9.84□□□□□ -0.83
LITAF-218ENST00000576036 IGKV2D-26A0A0A0MRZ7 120 aa9.83□□□□□ -0.84
LITAF-218ENST00000576036 J3QQQ9 107 aa9.83□□□□□ -0.84
LITAF-218ENST00000576036 HERVK_113P61574 105 aa9.83□□□□□ -0.84
LITAF-218ENST00000576036 NDUFA12Q9UI09 145 aa9.83□□□□□ -0.84
LITAF-218ENST00000576036 ERG28Q9UKR5 140 aa9.83□□□□□ -0.84
LITAF-218ENST00000576036 KRTAP10-4P60372 401 aaPredicted RBP9.82□□□□□ -0.84
LITAF-218ENST00000576036 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
LITAF-218ENST00000576036 XAGE1AQ9HD64 81 aa9.82□□□□□ -0.84
LITAF-218ENST00000576036 VPS13BQ7Z7G8 4022 aa9.81□□□□□ -0.84
LITAF-218ENST00000576036 C20orf202A1L168 122 aa9.81□□□□□ -0.84
LITAF-218ENST00000576036 PFN2P35080 140 aa9.81□□□□□ -0.84
LITAF-218ENST00000576036 ANKRD39Q53RE8 183 aa9.81□□□□□ -0.84
LITAF-218ENST00000576036 DPH3Q96FX2 82 aa9.81□□□□□ -0.84
LITAF-218ENST00000576036 TMA7Q9Y2S6 64 aaKnown RBP9.81□□□□□ -0.84
LITAF-218ENST00000576036 Q5VSD8 79 aa9.8□□□□□ -0.84
LITAF-218ENST00000576036 SFTA2Q6UW10 78 aa9.8□□□□□ -0.84
LITAF-218ENST00000576036 PCLOQ9Y6V0 5065 aa9.79□□□□□ -0.84
LITAF-218ENST00000576036 SERTAD4-AS1Q5TG53 156 aa9.79□□□□□ -0.84
LITAF-218ENST00000576036 TTTY13Q9BZ97 58 aa9.79□□□□□ -0.84
LITAF-218ENST00000576036 LGALS3P17931 250 aaKnown RBP9.78□□□□□ -0.84
LITAF-218ENST00000576036 HERV-K104P63124 156 aa9.78□□□□□ -0.84
LITAF-218ENST00000576036 COX17Q14061 63 aa9.78□□□□□ -0.84
LITAF-218ENST00000576036 FAM19A5Q7Z5A7 132 aaPredicted RBP9.78□□□□□ -0.84
LITAF-218ENST00000576036 MYMXA0A1B0GTQ4 84 aa9.77□□□□□ -0.85
LITAF-218ENST00000576036 SMIM13P0DJ93 91 aa9.77□□□□□ -0.85
LITAF-218ENST00000576036 NMUP48645 174 aa9.77□□□□□ -0.85
LITAF-218ENST00000576036 PHF5AQ7RTV0 110 aaKnown RBP9.77□□□□□ -0.85
LITAF-218ENST00000576036 Q8NDZ9 215 aa9.77□□□□□ -0.85
LITAF-218ENST00000576036 SND1-IT1Q9HBX3 110 aa9.77□□□□□ -0.85
LITAF-218ENST00000576036 A0A0U1RRA0 63 aa9.76□□□□□ -0.85
LITAF-218ENST00000576036 KRTAP11-1Q8IUC1 163 aa9.76□□□□□ -0.85
LITAF-218ENST00000576036 A0A0J9YXY3 114 aa9.74□□□□□ -0.85
LITAF-218ENST00000576036 LINC00158P58513 81 aa9.74□□□□□ -0.85
LITAF-218ENST00000576036 PLA2G2DQ9UNK4 145 aa9.74□□□□□ -0.85
LITAF-218ENST00000576036 PKHD1L1Q86WI1 4243 aa9.74□□□□□ -0.85
LITAF-218ENST00000576036 AKR1D1P51857 326 aa9.73□□□□□ -0.85
LITAF-218ENST00000576036 MEIG1Q5JSS6 88 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms