RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 C5orf56Q8N8D9 126 aa2.96□□□□□ -1.94
TSR1-203ENST00000575049 WFDC11Q8NEX6 87 aa2.96□□□□□ -1.94
TSR1-203ENST00000575049 COPS9Q8WXC6 57 aa2.96□□□□□ -1.94
TSR1-203ENST00000575049 CLEC2BQ92478 149 aa2.96□□□□□ -1.94
TSR1-203ENST00000575049 DIRC1Q969H9 104 aa2.96□□□□□ -1.94
TSR1-203ENST00000575049 USMG5Q96IX5 58 aa2.96□□□□□ -1.94
TSR1-203ENST00000575049 CACNA1GO43497 2377 aa2.96□□□□□ -1.94
TSR1-203ENST00000575049 PCNX2A6NKB5 2137 aa2.95□□□□□ -1.94
TSR1-203ENST00000575049 IGHV3-64A0A075B6Q5 118 aa2.95□□□□□ -1.94
TSR1-203ENST00000575049 G3V318 75 aa2.95□□□□□ -1.94
TSR1-203ENST00000575049 CIRBPQ14011 172 aaKnown RBP2.95□□□□□ -1.94
TSR1-203ENST00000575049 C22orf24Q9Y442 160 aa2.95□□□□□ -1.94
TSR1-203ENST00000575049 NAV3Q8IVL0 2385 aa2.95□□□□□ -1.94
TSR1-203ENST00000575049 MKI67P46013 3256 aaKnown RBP2.95□□□□□ -1.94
TSR1-203ENST00000575049 KNTC1P50748 2209 aa2.95□□□□□ -1.94
TSR1-203ENST00000575049 BAALC-AS2P0C853 105 aa2.94□□□□□ -1.94
TSR1-203ENST00000575049 FUSP35637 526 aaKnown RBP eCLIP2.94□□□□□ -1.94
TSR1-203ENST00000575049 TMEM258P61165 79 aa2.94□□□□□ -1.94
TSR1-203ENST00000575049 Q6JHZ5 121 aa2.94□□□□□ -1.94
TSR1-203ENST00000575049 LINC00308Q8TCZ7 52 aa2.94□□□□□ -1.94
TSR1-203ENST00000575049 DNAJC13O75165 2243 aa2.93□□□□□ -1.94
TSR1-203ENST00000575049 TRAV12-3A0A0B4J271 114 aa2.93□□□□□ -1.94
TSR1-203ENST00000575049 DEFB1P60022 68 aa2.93□□□□□ -1.94
TSR1-203ENST00000575049 SNRPD3P62318 126 aaKnown RBP2.93□□□□□ -1.94
TSR1-203ENST00000575049 FAM74A4Q5TZK3 123 aa2.93□□□□□ -1.94
TSR1-203ENST00000575049 DPH3Q96FX2 82 aa2.93□□□□□ -1.94
TSR1-203ENST00000575049 OBSCN-AS1Q96MR7 158 aa2.93□□□□□ -1.94
TSR1-203ENST00000575049 RHPN1-AS1Q9BWJ2 59 aa2.93□□□□□ -1.94
TSR1-203ENST00000575049 UBE2D4Q9Y2X8 147 aa2.93□□□□□ -1.94
TSR1-203ENST00000575049 CNTRLQ7Z7A1 2325 aa2.93□□□□□ -1.94
TSR1-203ENST00000575049 PKD1L2Q7Z442 2459 aa2.93□□□□□ -1.94
TSR1-203ENST00000575049 REV3LO60673 3130 aa2.93□□□□□ -1.94
TSR1-203ENST00000575049 MED13Q9UHV7 2174 aa2.93□□□□□ -1.94
TSR1-203ENST00000575049 DNAH14Q0VDD8 3507 aa2.92□□□□□ -1.94
TSR1-203ENST00000575049 PLXNB1O43157 2135 aa2.92□□□□□ -1.94
TSR1-203ENST00000575049 KRTAP1-4P0C5Y4 121 aa2.92□□□□□ -1.94
TSR1-203ENST00000575049 SERP2Q8N6R1 65 aa2.92□□□□□ -1.94
TSR1-203ENST00000575049 DEFB124Q8NES8 71 aa2.92□□□□□ -1.94
TSR1-203ENST00000575049 DEFB104AQ8WTQ1 72 aa2.92□□□□□ -1.94
TSR1-203ENST00000575049 TRAV13-2A0A0B4J235 113 aa2.91□□□□□ -1.94
TSR1-203ENST00000575049 hADV29S1A0JD25 119 aa2.91□□□□□ -1.94
TSR1-203ENST00000575049 A8MTW9 85 aa2.91□□□□□ -1.94
TSR1-203ENST00000575049 A8MU10 97 aa2.91□□□□□ -1.94
TSR1-203ENST00000575049 H0YGX0 51 aa2.91□□□□□ -1.94
TSR1-203ENST00000575049 BCE1O60756 84 aa2.91□□□□□ -1.94
TSR1-203ENST00000575049 SPINT4Q6UDR6 99 aa2.91□□□□□ -1.94
TSR1-203ENST00000575049 Q8N2B8 174 aa2.91□□□□□ -1.94
TSR1-203ENST00000575049 ZNF625Q96I27 306 aaPredicted RBP2.91□□□□□ -1.94
TSR1-203ENST00000575049 LINC00467Q9BRT7 94 aa2.91□□□□□ -1.94
TSR1-203ENST00000575049 CDKN2A-AS1Q9UH64 79 aa2.91□□□□□ -1.94
TSR1-203ENST00000575049 LAMA2P24043 3122 aaKnown RBP2.9□□□□□ -1.94
TSR1-203ENST00000575049 NPC2P61916 151 aa2.9□□□□□ -1.95
TSR1-203ENST00000575049 ATP5EP2Q5VTU8 51 aa2.9□□□□□ -1.95
TSR1-203ENST00000575049 Q6ZQT0 140 aa2.9□□□□□ -1.95
TSR1-203ENST00000575049 RETNLBQ9BQ08 111 aa2.9□□□□□ -1.95
TSR1-203ENST00000575049 SZT2Q5T011 3432 aa2.9□□□□□ -1.95
TSR1-203ENST00000575049 LAMA3Q16787 3333 aa2.89□□□□□ -1.95
TSR1-203ENST00000575049 TRBV10-3A0A0K0K1G6 114 aa2.89□□□□□ -1.95
TSR1-203ENST00000575049 DNAL4O96015 105 aa2.89□□□□□ -1.95
TSR1-203ENST00000575049 COX6A2Q02221 97 aa2.89□□□□□ -1.95
TSR1-203ENST00000575049 S100A7L2Q5SY68 101 aa2.89□□□□□ -1.95
TSR1-203ENST00000575049 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
TSR1-203ENST00000575049 MALRD1Q5VYJ5 2156 aa2.89□□□□□ -1.95
TSR1-203ENST00000575049 LYPD5Q6UWN5 251 aa2.89□□□□□ -1.95
TSR1-203ENST00000575049 SDK1Q7Z5N4 2213 aa2.89□□□□□ -1.95
TSR1-203ENST00000575049 HEATR1Q9H583 2144 aaKnown RBP2.89□□□□□ -1.95
TSR1-203ENST00000575049 IGKV3-7A0A075B6H7 116 aa2.88□□□□□ -1.95
TSR1-203ENST00000575049 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.88□□□□□ -1.95
TSR1-203ENST00000575049 TRAV12-2A0A075B6T6 113 aa2.88□□□□□ -1.95
TSR1-203ENST00000575049 IGKV2-29A2NJV5 120 aaPredicted RBP2.88□□□□□ -1.95
TSR1-203ENST00000575049 CRPP02741 224 aa2.88□□□□□ -1.95
TSR1-203ENST00000575049 CCKP06307 115 aa2.88□□□□□ -1.95
TSR1-203ENST00000575049 ESRGQ1W209 222 aa2.88□□□□□ -1.95
TSR1-203ENST00000575049 SPINK13Q1W4C9 94 aa2.88□□□□□ -1.95
TSR1-203ENST00000575049 Q8N9L7 120 aa2.88□□□□□ -1.95
TSR1-203ENST00000575049 LINC00167Q96N53 147 aa2.88□□□□□ -1.95
TSR1-203ENST00000575049 CYSTM1Q9H1C7 97 aa2.88□□□□□ -1.95
TSR1-203ENST00000575049 LINC00846Q9NV44 126 aa2.88□□□□□ -1.95
TSR1-203ENST00000575049 R4GN34 69 aa2.88□□□□□ -1.95
TSR1-203ENST00000575049 ARFGEF3Q5TH69 2177 aa2.88□□□□□ -1.95
TSR1-203ENST00000575049 INTS1Q8N201 2190 aaKnown RBP2.88□□□□□ -1.95
TSR1-203ENST00000575049 RANBP2P49792 3224 aaKnown RBP2.88□□□□□ -1.95
TSR1-203ENST00000575049 TECTAO75443 2155 aa2.87□□□□□ -1.95
TSR1-203ENST00000575049 XIRP2A4UGR9 3374 aa2.87□□□□□ -1.95
TSR1-203ENST00000575049 IGKV2-28A0A075B6P5 120 aa2.87□□□□□ -1.95
TSR1-203ENST00000575049 IGKV3D-7A0A0C4DH55 119 aa2.87□□□□□ -1.95
TSR1-203ENST00000575049 IGKV2D-28P01615 120 aa2.87□□□□□ -1.95
TSR1-203ENST00000575049 SS18Q15532 418 aa2.87□□□□□ -1.95
TSR1-203ENST00000575049 SMIM11BQ8TCY0 68 aa2.87□□□□□ -1.95
TSR1-203ENST00000575049 CADP27708 2225 aa2.87□□□□□ -1.95
TSR1-203ENST00000575049 AHCTF1Q8WYP5 2266 aa2.86□□□□□ -1.95
TSR1-203ENST00000575049 TRBV10-1A0A0K0K1A3 114 aa2.86□□□□□ -1.95
TSR1-203ENST00000575049 IBA57-AS1B1ANH7 110 aa2.86□□□□□ -1.95
TSR1-203ENST00000575049 B4DSR2 109 aa2.86□□□□□ -1.95
TSR1-203ENST00000575049 JMJD7-PLA2G4BH0Y9G9 81 aa2.86□□□□□ -1.95
TSR1-203ENST00000575049 PSCAO43653 123 aa2.86□□□□□ -1.95
TSR1-203ENST00000575049 IGLV1-51P01701 117 aa2.86□□□□□ -1.95
TSR1-203ENST00000575049 BLCAPP62952 87 aa2.86□□□□□ -1.95
TSR1-203ENST00000575049 DSCR8Q96T75 97 aa2.86□□□□□ -1.95
TSR1-203ENST00000575049 HIGD2AQ9BW72 106 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms