RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 CHCHD10Q8WYQ3 142 aaPredicted RBP9.63□□□□□ -0.87
VPS33B-208ENST00000574755 IBA57-AS1B1ANH7 110 aa9.62□□□□□ -0.87
VPS33B-208ENST00000574755 C9JAW5 83 aa9.62□□□□□ -0.87
VPS33B-208ENST00000574755 Q8IZM0 81 aa9.62□□□□□ -0.87
VPS33B-208ENST00000574755 J3QR89 54 aa9.61□□□□□ -0.87
VPS33B-208ENST00000574755 COX7A2LO14548 114 aa9.61□□□□□ -0.87
VPS33B-208ENST00000574755 PFN2P35080 140 aa9.61□□□□□ -0.87
VPS33B-208ENST00000574755 PPDPFQ9H3Y8 114 aa9.61□□□□□ -0.87
VPS33B-208ENST00000574755 Q6ZTC4 211 aa9.61□□□□□ -0.87
VPS33B-208ENST00000574755 LINC01561Q8N1V8 128 aa9.61□□□□□ -0.87
VPS33B-208ENST00000574755 SLC25A20O43772 301 aa9.6□□□□□ -0.87
VPS33B-208ENST00000574755 LYPD5Q6UWN5 251 aa9.6□□□□□ -0.87
VPS33B-208ENST00000574755 COL6A5A8TX70 2615 aa9.6□□□□□ -0.87
VPS33B-208ENST00000574755 MALP21145 153 aa9.6□□□□□ -0.87
VPS33B-208ENST00000574755 LINC01620Q4KN68 170 aa9.59□□□□□ -0.87
VPS33B-208ENST00000574755 KPRPQ5T749 579 aaPredicted RBP9.59□□□□□ -0.87
VPS33B-208ENST00000574755 C2orf82Q6UX34 121 aa9.59□□□□□ -0.87
VPS33B-208ENST00000574755 SND1-IT1Q9HBX3 110 aa9.59□□□□□ -0.87
VPS33B-208ENST00000574755 CKS1BP61024 79 aa9.59□□□□□ -0.87
VPS33B-208ENST00000574755 A0A0J9YWU9 116 aa9.58□□□□□ -0.88
VPS33B-208ENST00000574755 H3BNG1 76 aa9.58□□□□□ -0.88
VPS33B-208ENST00000574755 TEN1Q86WV5 123 aa9.58□□□□□ -0.88
VPS33B-208ENST00000574755 CLEC2BQ92478 149 aa9.58□□□□□ -0.88
VPS33B-208ENST00000574755 KLK12Q9UKR0 248 aa9.58□□□□□ -0.88
VPS33B-208ENST00000574755 FOXI1Q12951 378 aa9.58□□□□□ -0.88
VPS33B-208ENST00000574755 TENM3Q9P273 2699 aa9.57□□□□□ -0.88
VPS33B-208ENST00000574755 CFAP161Q6P656 301 aa9.57□□□□□ -0.88
VPS33B-208ENST00000574755 CCL18P55774 89 aa9.57□□□□□ -0.88
VPS33B-208ENST00000574755 NOTCH1P46531 2555 aa9.56□□□□□ -0.88
VPS33B-208ENST00000574755 TRAV13-2A0A0B4J235 113 aa9.56□□□□□ -0.88
VPS33B-208ENST00000574755 CRPP02741 224 aa9.56□□□□□ -0.88
VPS33B-208ENST00000574755 ANKRD29Q8N6D5 301 aa9.56□□□□□ -0.88
VPS33B-208ENST00000574755 PRR34Q9NV39 138 aa9.56□□□□□ -0.88
VPS33B-208ENST00000574755 KIAA0087Q14695 138 aa9.56□□□□□ -0.88
VPS33B-208ENST00000574755 GAGE12HA6NDE8 117 aa9.55□□□□□ -0.88
VPS33B-208ENST00000574755 LST1O00453 97 aa9.55□□□□□ -0.88
VPS33B-208ENST00000574755 NANOS2P60321 138 aaKnown RBP9.55□□□□□ -0.88
VPS33B-208ENST00000574755 IGKV2-28A0A075B6P5 120 aa9.55□□□□□ -0.88
VPS33B-208ENST00000574755 IGKV2D-28P01615 120 aa9.55□□□□□ -0.88
VPS33B-208ENST00000574755 CXCL5P42830 114 aa9.55□□□□□ -0.88
VPS33B-208ENST00000574755 C11orf45Q8TAV5 145 aa9.55□□□□□ -0.88
VPS33B-208ENST00000574755 TRBV10-2A0A0K0K1G8 114 aa9.54□□□□□ -0.88
VPS33B-208ENST00000574755 M0QXV9 152 aa9.54□□□□□ -0.88
VPS33B-208ENST00000574755 PRB2P02812 416 aaPredicted RBP9.54□□□□□ -0.88
VPS33B-208ENST00000574755 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
VPS33B-208ENST00000574755 LINC00337Q8N6G1 96 aa9.54□□□□□ -0.88
VPS33B-208ENST00000574755 PPDPFLQ8WWR9 84 aa9.54□□□□□ -0.88
VPS33B-208ENST00000574755 WFDC10BQ8IUB3 73 aa9.53□□□□□ -0.88
VPS33B-208ENST00000574755 DNAH3Q8TD57 4116 aa9.53□□□□□ -0.88
VPS33B-208ENST00000574755 DEFB131BA0A096LNP1 70 aa9.53□□□□□ -0.88
VPS33B-208ENST00000574755 UBE2WQ96B02 151 aa9.52□□□□□ -0.88
VPS33B-208ENST00000574755 CARD19Q96LW7 228 aa9.52□□□□□ -0.88
VPS33B-208ENST00000574755 COX17Q14061 63 aa9.51□□□□□ -0.89
VPS33B-208ENST00000574755 NBEAL1Q6ZS30 2694 aa9.5□□□□□ -0.89
VPS33B-208ENST00000574755 SPAG11BQ08648 103 aa9.5□□□□□ -0.89
VPS33B-208ENST00000574755 KLK5Q9Y337 293 aaPredicted RBP9.5□□□□□ -0.89
VPS33B-208ENST00000574755 TRAV8-4A0A0B4J246 113 aa9.5□□□□□ -0.89
VPS33B-208ENST00000574755 ESRGQ1W209 222 aa9.5□□□□□ -0.89
VPS33B-208ENST00000574755 NTN5Q8WTR8 489 aaPredicted RBP9.5□□□□□ -0.89
VPS33B-208ENST00000574755 H3BT86 120 aa9.49□□□□□ -0.89
VPS33B-208ENST00000574755 RPL28P46779 137 aaKnown RBP9.49□□□□□ -0.89
VPS33B-208ENST00000574755 PCP4P48539 62 aa9.49□□□□□ -0.89
VPS33B-208ENST00000574755 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
VPS33B-208ENST00000574755 SPATA25Q9BR10 227 aa9.49□□□□□ -0.89
VPS33B-208ENST00000574755 C6orf223Q8N319 242 aa9.49□□□□□ -0.89
VPS33B-208ENST00000574755 LINC01600Q96MT4 127 aa9.49□□□□□ -0.89
VPS33B-208ENST00000574755 DEFB121Q5J5C9 76 aa9.48□□□□□ -0.89
VPS33B-208ENST00000574755 OR13C6PQ8NH95 151 aa9.48□□□□□ -0.89
VPS33B-208ENST00000574755 MRAPQ8TCY5 172 aa9.48□□□□□ -0.89
VPS33B-208ENST00000574755 LINC00526Q96FQ7 95 aa9.48□□□□□ -0.89
VPS33B-208ENST00000574755 SMIM11BQ8TCY0 68 aa9.48□□□□□ -0.89
VPS33B-208ENST00000574755 TEX49A0A1B0GTD5 131 aa9.46□□□□□ -0.89
VPS33B-208ENST00000574755 UNQ6190/PRO20217Q6UXQ8 127 aa9.46□□□□□ -0.89
VPS33B-208ENST00000574755 K7EIL1 84 aa9.46□□□□□ -0.9
VPS33B-208ENST00000574755 C10orf25Q5T742 122 aa9.46□□□□□ -0.9
VPS33B-208ENST00000574755 FAM218AQ96MZ4 157 aa9.45□□□□□ -0.9
VPS33B-208ENST00000574755 TM2D3Q9BRN9 247 aa9.45□□□□□ -0.9
VPS33B-208ENST00000574755 TRACP01848 142 aa9.44□□□□□ -0.9
VPS33B-208ENST00000574755 TRAV10A0A0B4J240 114 aa9.43□□□□□ -0.9
VPS33B-208ENST00000574755 NDUFC2O95298 119 aa9.43□□□□□ -0.9
VPS33B-208ENST00000574755 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
VPS33B-208ENST00000574755 SIGMAR1Q99720 223 aa9.43□□□□□ -0.9
VPS33B-208ENST00000574755 LINC01556Q5JQF7 62 aa9.42□□□□□ -0.9
VPS33B-208ENST00000574755 C21orf62-AS1Q17RA5 79 aa9.41□□□□□ -0.9
VPS33B-208ENST00000574755 H0YGX0 51 aa9.41□□□□□ -0.9
VPS33B-208ENST00000574755 ZNF561-AS1K7EIQ3 104 aa9.41□□□□□ -0.9
VPS33B-208ENST00000574755 HIGD2BQ4VC39 106 aa9.41□□□□□ -0.9
VPS33B-208ENST00000574755 KRTAP26-1Q6PEX3 210 aa9.41□□□□□ -0.9
VPS33B-208ENST00000574755 MUC7Q8TAX7 377 aa9.41□□□□□ -0.9
VPS33B-208ENST00000574755 C1orf43Q9BWL3 253 aa9.41□□□□□ -0.9
VPS33B-208ENST00000574755 CDIP1Q9H305 208 aa9.41□□□□□ -0.9
VPS33B-208ENST00000574755 MGAM2Q2M2H8 2515 aa9.4□□□□□ -0.9
VPS33B-208ENST00000574755 C15orf53Q8NAA6 179 aa9.4□□□□□ -0.9
VPS33B-208ENST00000574755 Q9HAA7 133 aa9.4□□□□□ -0.9
VPS33B-208ENST00000574755 A0A087WYN8 130 aa9.39□□□□□ -0.91
VPS33B-208ENST00000574755 GVQW2A0A096LPI5 108 aaPredicted RBP9.39□□□□□ -0.91
VPS33B-208ENST00000574755 NCR3O14931 201 aa9.39□□□□□ -0.91
VPS33B-208ENST00000574755 DNAL4O96015 105 aa9.39□□□□□ -0.91
VPS33B-208ENST00000574755 C6orf48Q9UBA6 75 aa9.39□□□□□ -0.91
VPS33B-208ENST00000574755 BAALC-AS2P0C853 105 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms