RNA–Protein interactions for RNA: ENST00000571351.1

TNFRSF12A-203, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 1,678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-203ENST00000571351 A0A0J9YXY3 114 aa13.59□□□□□ -0.23
TNFRSF12A-203ENST00000571351 HERV-K104P63124 156 aa13.59□□□□□ -0.23
TNFRSF12A-203ENST00000571351 BATFQ16520 125 aa13.59□□□□□ -0.23
TNFRSF12A-203ENST00000571351 KIAA0087Q14695 138 aa13.58□□□□□ -0.24
TNFRSF12A-203ENST00000571351 PRSS2P07478 247 aa13.57□□□□□ -0.24
TNFRSF12A-203ENST00000571351 HSD52Q0P140 79 aa13.57□□□□□ -0.24
TNFRSF12A-203ENST00000571351 TAL2Q16559 108 aa13.57□□□□□ -0.24
TNFRSF12A-203ENST00000571351 Q6ZRN7 208 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF12A-203ENST00000571351 COX11Q9Y6N1 276 aa13.57□□□□□ -0.24
TNFRSF12A-203ENST00000571351 CXCL5P42830 114 aa13.56□□□□□ -0.24
TNFRSF12A-203ENST00000571351 HINT1P49773 126 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF12A-203ENST00000571351 C6orf226Q5I0X4 101 aa13.56□□□□□ -0.24
TNFRSF12A-203ENST00000571351 SPANXB1Q9NS25 103 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF12A-203ENST00000571351 RYR3Q15413 4870 aa13.56□□□□□ -0.24
TNFRSF12A-203ENST00000571351 FAT2Q9NYQ8 4349 aa13.55□□□□□ -0.24
TNFRSF12A-203ENST00000571351 TIMM17BO60830 172 aa13.55□□□□□ -0.24
TNFRSF12A-203ENST00000571351 LBHQ53QV2 105 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF12A-203ENST00000571351 TMEM238C9JI98 176 aa13.53□□□□□ -0.24
TNFRSF12A-203ENST00000571351 CFAP161Q6P656 301 aa13.53□□□□□ -0.24
TNFRSF12A-203ENST00000571351 C6orf223Q8N319 242 aa13.53□□□□□ -0.24
TNFRSF12A-203ENST00000571351 SPAG11BQ08648 103 aa13.53□□□□□ -0.24
TNFRSF12A-203ENST00000571351 LITAFQ99732 161 aa13.53□□□□□ -0.24
TNFRSF12A-203ENST00000571351 TM2D2Q9BX73 214 aa13.53□□□□□ -0.24
TNFRSF12A-203ENST00000571351 C15orf56Q8N910 161 aa13.51□□□□□ -0.25
TNFRSF12A-203ENST00000571351 HIST1H4GQ99525 98 aa13.51□□□□□ -0.25
TNFRSF12A-203ENST00000571351 CKS1BP61024 79 aa13.5□□□□□ -0.25
TNFRSF12A-203ENST00000571351 CIRBPQ14011 172 aaKnown RBP13.5□□□□□ -0.25
TNFRSF12A-203ENST00000571351 BVES-AS1Q5T3Y7 98 aa13.5□□□□□ -0.25
TNFRSF12A-203ENST00000571351 SRSF9Q13242 221 aaKnown RBP eCLIP13.5□□□□□ -0.25
TNFRSF12A-203ENST00000571351 Q6ZVH6 145 aa13.5□□□□□ -0.25
TNFRSF12A-203ENST00000571351 SPANXDQ9BXN6 97 aa13.5□□□□□ -0.25
TNFRSF12A-203ENST00000571351 SPANXCQ9NY87 97 aa13.5□□□□□ -0.25
TNFRSF12A-203ENST00000571351 DNAH11Q96DT5 4516 aa13.49□□□□□ -0.25
TNFRSF12A-203ENST00000571351 C1orf134Q5TEV5 83 aa13.49□□□□□ -0.25
TNFRSF12A-203ENST00000571351 CEND1Q8N111 149 aa13.49□□□□□ -0.25
TNFRSF12A-203ENST00000571351 NTN5Q8WTR8 489 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF12A-203ENST00000571351 GVQW2A0A096LPI5 108 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF12A-203ENST00000571351 C2orf82Q6UX34 121 aa13.48□□□□□ -0.25
TNFRSF12A-203ENST00000571351 F8WDY8 70 aa13.47□□□□□ -0.25
TNFRSF12A-203ENST00000571351 WFDC2Q14508 124 aa13.47□□□□□ -0.25
TNFRSF12A-203ENST00000571351 MEIG1Q5JSS6 88 aa13.47□□□□□ -0.25
TNFRSF12A-203ENST00000571351 ZNF561-AS1K7EIQ3 104 aa13.47□□□□□ -0.25
TNFRSF12A-203ENST00000571351 COL5A1-AS1Q5SY13 56 aa13.47□□□□□ -0.25
TNFRSF12A-203ENST00000571351 ADAMTSL4-AS1Q5T5F5 129 aa13.47□□□□□ -0.25
TNFRSF12A-203ENST00000571351 C2orf48Q96LS8 159 aa13.47□□□□□ -0.25
TNFRSF12A-203ENST00000571351 PSCAO43653 123 aa13.45□□□□□ -0.26
TNFRSF12A-203ENST00000571351 GCSHP23434 173 aa13.45□□□□□ -0.26
TNFRSF12A-203ENST00000571351 LRCOL1A6NCL2 159 aa13.44□□□□□ -0.26
TNFRSF12A-203ENST00000571351 LECT2O14960 151 aa13.44□□□□□ -0.26
TNFRSF12A-203ENST00000571351 RTL8CO15255 209 aa13.44□□□□□ -0.26
TNFRSF12A-203ENST00000571351 HECTD4Q9Y4D8 3996 aa13.44□□□□□ -0.26
TNFRSF12A-203ENST00000571351 USP17L23D6RBM5 183 aa13.44□□□□□ -0.26
TNFRSF12A-203ENST00000571351 SMIM13P0DJ93 91 aa13.44□□□□□ -0.26
TNFRSF12A-203ENST00000571351 PTTG1IPP53801 180 aa13.44□□□□□ -0.26
TNFRSF12A-203ENST00000571351 HIGD2BQ4VC39 106 aa13.44□□□□□ -0.26
TNFRSF12A-203ENST00000571351 ERG28Q9UKR5 140 aa13.44□□□□□ -0.26
TNFRSF12A-203ENST00000571351 IFITM1P13164 125 aa13.43□□□□□ -0.26
TNFRSF12A-203ENST00000571351 FXYD2P54710 66 aa13.43□□□□□ -0.26
TNFRSF12A-203ENST00000571351 COX17Q14061 63 aa13.43□□□□□ -0.26
TNFRSF12A-203ENST00000571351 LINC00526Q96FQ7 95 aa13.43□□□□□ -0.26
TNFRSF12A-203ENST00000571351 UNQ6190/PRO20217Q6UXQ8 127 aa13.42□□□□□ -0.26
TNFRSF12A-203ENST00000571351 PPDPFQ9H3Y8 114 aa13.42□□□□□ -0.26
TNFRSF12A-203ENST00000571351 TRBV30A0A0K0K1B3 111 aa13.4□□□□□ -0.26
TNFRSF12A-203ENST00000571351 C10orf25Q5T742 122 aa13.4□□□□□ -0.26
TNFRSF12A-203ENST00000571351 CAMK2N2Q96S95 79 aa13.4□□□□□ -0.26
TNFRSF12A-203ENST00000571351 PKD1P98161 4303 aa13.4□□□□□ -0.26
TNFRSF12A-203ENST00000571351 MUSTN1Q8IVN3 82 aa13.4□□□□□ -0.26
TNFRSF12A-203ENST00000571351 COPS9Q8WXC6 57 aa13.4□□□□□ -0.26
TNFRSF12A-203ENST00000571351 TMEM238LA0A1B0GVL6 79 aa13.39□□□□□ -0.27
TNFRSF12A-203ENST00000571351 A6NJY4 79 aa13.39□□□□□ -0.27
TNFRSF12A-203ENST00000571351 LINC00158P58513 81 aa13.39□□□□□ -0.27
TNFRSF12A-203ENST00000571351 A0A0U1RRA0 63 aa13.38□□□□□ -0.27
TNFRSF12A-203ENST00000571351 A0A1B0GV90 55 aa13.38□□□□□ -0.27
TNFRSF12A-203ENST00000571351 A6NDN8 102 aa13.38□□□□□ -0.27
TNFRSF12A-203ENST00000571351 RPL24P83731 157 aaKnown RBP13.38□□□□□ -0.27
TNFRSF12A-203ENST00000571351 MIR7-3HGQ8N6C7 128 aa13.38□□□□□ -0.27
TNFRSF12A-203ENST00000571351 DAND5Q8N907 189 aa13.38□□□□□ -0.27
TNFRSF12A-203ENST00000571351 PFN2P35080 140 aa13.37□□□□□ -0.27
TNFRSF12A-203ENST00000571351 TNP2Q05952 138 aa13.37□□□□□ -0.27
TNFRSF12A-203ENST00000571351 LINC00308Q8TCZ7 52 aa13.37□□□□□ -0.27
TNFRSF12A-203ENST00000571351 C6orf48Q9UBA6 75 aa13.37□□□□□ -0.27
TNFRSF12A-203ENST00000571351 DNAH5Q8TE73 4624 aa13.37□□□□□ -0.27
TNFRSF12A-203ENST00000571351 A0A087WTM6 91 aa13.37□□□□□ -0.27
TNFRSF12A-203ENST00000571351 Q6ZRU5 148 aa13.36□□□□□ -0.27
TNFRSF12A-203ENST00000571351 SLPIP03973 132 aa13.35□□□□□ -0.27
TNFRSF12A-203ENST00000571351 SYCNQ0VAF6 134 aa13.35□□□□□ -0.27
TNFRSF12A-203ENST00000571351 C9orf116Q5BN46 136 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF12A-203ENST00000571351 A0A1B0GWB2 263 aa13.34□□□□□ -0.27
TNFRSF12A-203ENST00000571351 C14orf177Q52M58 125 aa13.34□□□□□ -0.27
TNFRSF12A-203ENST00000571351 A4D1N5 150 aa13.34□□□□□ -0.27
TNFRSF12A-203ENST00000571351 RNF151Q2KHN1 245 aa13.34□□□□□ -0.27
TNFRSF12A-203ENST00000571351 SOSTDC1Q6X4U4 206 aa13.34□□□□□ -0.27
TNFRSF12A-203ENST00000571351 LOC107984156A0A0G2JMH3 177 aa13.33□□□□□ -0.28
TNFRSF12A-203ENST00000571351 EIF4EBP3O60516 100 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF12A-203ENST00000571351 ARL17AQ8IVW1 177 aa13.33□□□□□ -0.28
TNFRSF12A-203ENST00000571351 NHP2Q9NX24 153 aaKnown RBP13.33□□□□□ -0.28
TNFRSF12A-203ENST00000571351 NPC2P61916 151 aa13.32□□□□□ -0.28
TNFRSF12A-203ENST00000571351 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF12A-203ENST00000571351 Q8N814 137 aa13.31□□□□□ -0.28
TNFRSF12A-203ENST00000571351 CARD19Q96LW7 228 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms