RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 DEFB130AP0DP74 79 aa12.33□□□□□ -0.44
CMTM3-214ENST00000567572 RPL28P46779 137 aaKnown RBP12.33□□□□□ -0.44
CMTM3-214ENST00000567572 CKS1BP61024 79 aa12.33□□□□□ -0.44
CMTM3-214ENST00000567572 GYPEP15421 78 aa12.32□□□□□ -0.44
CMTM3-214ENST00000567572 OXLD1Q5BKU9 147 aa12.32□□□□□ -0.44
CMTM3-214ENST00000567572 MIR7-3HGQ8N6C7 128 aa12.32□□□□□ -0.44
CMTM3-214ENST00000567572 SNCGO76070 127 aa12.31□□□□□ -0.44
CMTM3-214ENST00000567572 Q6Q795 121 aa12.31□□□□□ -0.44
CMTM3-214ENST00000567572 TOMM7Q9P0U1 55 aa12.31□□□□□ -0.44
CMTM3-214ENST00000567572 NBEAL2Q6ZNJ1 2754 aa12.3□□□□□ -0.44
CMTM3-214ENST00000567572 SS18Q15532 418 aa12.3□□□□□ -0.44
CMTM3-214ENST00000567572 SND1-IT1Q9HBX3 110 aa12.3□□□□□ -0.44
CMTM3-214ENST00000567572 ACYP1P07311 99 aa12.29□□□□□ -0.44
CMTM3-214ENST00000567572 KRTAP10-11P60412 298 aa12.29□□□□□ -0.44
CMTM3-214ENST00000567572 EGFEM1PQ0D2K5 195 aa12.29□□□□□ -0.44
CMTM3-214ENST00000567572 STAB1Q9NY15 2570 aa12.28□□□□□ -0.44
CMTM3-214ENST00000567572 IGHV4-28A0A0C4DH34 117 aa12.28□□□□□ -0.44
CMTM3-214ENST00000567572 IGKV3OR2-268A0A0C4DH90 116 aa12.28□□□□□ -0.44
CMTM3-214ENST00000567572 LINC00158P58513 81 aa12.28□□□□□ -0.44
CMTM3-214ENST00000567572 Q8IZM0 81 aa12.28□□□□□ -0.44
CMTM3-214ENST00000567572 Q8NAQ8 132 aa12.27□□□□□ -0.44
CMTM3-214ENST00000567572 MIFP14174 115 aa12.27□□□□□ -0.45
CMTM3-214ENST00000567572 LINC00337Q8N6G1 96 aa12.26□□□□□ -0.45
CMTM3-214ENST00000567572 IGKV2-28A0A075B6P5 120 aa12.25□□□□□ -0.45
CMTM3-214ENST00000567572 IGKV2D-28P01615 120 aa12.25□□□□□ -0.45
CMTM3-214ENST00000567572 GAGE2BQ13066 116 aa12.25□□□□□ -0.45
CMTM3-214ENST00000567572 GAGE2EQ4V326 116 aa12.25□□□□□ -0.45
CMTM3-214ENST00000567572 GAGE2DQ9UEU5 116 aa12.25□□□□□ -0.45
CMTM3-214ENST00000567572 H0YGX0 51 aa12.25□□□□□ -0.45
CMTM3-214ENST00000567572 DEFB4AO15263 64 aa12.25□□□□□ -0.45
CMTM3-214ENST00000567572 PAX4O43316 350 aa12.25□□□□□ -0.45
CMTM3-214ENST00000567572 CCL18P55774 89 aa12.25□□□□□ -0.45
CMTM3-214ENST00000567572 C5orf38Q86SI9 138 aa12.25□□□□□ -0.45
CMTM3-214ENST00000567572 C6orf226Q5I0X4 101 aa12.24□□□□□ -0.45
CMTM3-214ENST00000567572 CMYA5Q8N3K9 4069 aa12.24□□□□□ -0.45
CMTM3-214ENST00000567572 PKD1L1Q8TDX9 2849 aa12.24□□□□□ -0.45
CMTM3-214ENST00000567572 MAST4O15021 2626 aa12.23□□□□□ -0.45
CMTM3-214ENST00000567572 CXCL5P42830 114 aa12.23□□□□□ -0.45
CMTM3-214ENST00000567572 C15orf53Q8NAA6 179 aa12.23□□□□□ -0.45
CMTM3-214ENST00000567572 BAALC-AS2P0C853 105 aa12.21□□□□□ -0.45
CMTM3-214ENST00000567572 INAFM2P0DMQ5 153 aa12.21□□□□□ -0.45
CMTM3-214ENST00000567572 CELA1Q9UNI1 258 aa12.21□□□□□ -0.46
CMTM3-214ENST00000567572 XCL1P47992 114 aa12.2□□□□□ -0.46
CMTM3-214ENST00000567572 COX17Q14061 63 aa12.2□□□□□ -0.46
CMTM3-214ENST00000567572 CD164L2Q6UWJ8 174 aa12.2□□□□□ -0.46
CMTM3-214ENST00000567572 FAM218AQ96MZ4 157 aa12.2□□□□□ -0.46
CMTM3-214ENST00000567572 DAD1P61803 113 aa12.19□□□□□ -0.46
CMTM3-214ENST00000567572 SMIM11BQ8TCY0 68 aa12.19□□□□□ -0.46
CMTM3-214ENST00000567572 ANAPC13Q9BS18 74 aa12.18□□□□□ -0.46
CMTM3-214ENST00000567572 DNAL4O96015 105 aa12.17□□□□□ -0.46
CMTM3-214ENST00000567572 ATP5G1P05496 136 aa12.17□□□□□ -0.46
CMTM3-214ENST00000567572 SPART-AS1P0CW21 52 aa12.17□□□□□ -0.46
CMTM3-214ENST00000567572 PFN2P35080 140 aa12.17□□□□□ -0.46
CMTM3-214ENST00000567572 MALP21145 153 aa12.17□□□□□ -0.46
CMTM3-214ENST00000567572 MUC7Q8TAX7 377 aa12.17□□□□□ -0.46
CMTM3-214ENST00000567572 TRBV7-7A0A0K0K1E9 115 aa12.16□□□□□ -0.46
CMTM3-214ENST00000567572 NDUFC2O95298 119 aa12.16□□□□□ -0.46
CMTM3-214ENST00000567572 DNAH3Q8TD57 4116 aa12.16□□□□□ -0.46
CMTM3-214ENST00000567572 COL6A5A8TX70 2615 aa12.15□□□□□ -0.46
CMTM3-214ENST00000567572 IMUPQ9GZP8 106 aa12.15□□□□□ -0.46
CMTM3-214ENST00000567572 C22orf24Q9Y442 160 aa12.15□□□□□ -0.46
CMTM3-214ENST00000567572 NDUFV3P56181 108 aaKnown RBP12.14□□□□□ -0.47
CMTM3-214ENST00000567572 TTC32Q5I0X7 151 aa12.14□□□□□ -0.47
CMTM3-214ENST00000567572 A0A1B0GX51 115 aa12.13□□□□□ -0.47
CMTM3-214ENST00000567572 REG3AQ06141 175 aa12.13□□□□□ -0.47
CMTM3-214ENST00000567572 KIAA0087Q14695 138 aa12.13□□□□□ -0.47
CMTM3-214ENST00000567572 SDIM1Q6ZPB5 146 aa12.13□□□□□ -0.47
CMTM3-214ENST00000567572 LINC00269Q8N2A0 174 aa12.13□□□□□ -0.47
CMTM3-214ENST00000567572 CHCHD10Q8WYQ3 142 aaPredicted RBP12.13□□□□□ -0.47
CMTM3-214ENST00000567572 RETNQ9HD89 108 aa12.13□□□□□ -0.47
CMTM3-214ENST00000567572 ANK2Q01484 3957 aa12.12□□□□□ -0.47
CMTM3-214ENST00000567572 A0A096LPF7 62 aa12.11□□□□□ -0.47
CMTM3-214ENST00000567572 LINC00643Q86TS7 51 aa12.11□□□□□ -0.47
CMTM3-214ENST00000567572 ANGP03950 147 aaKnown RBP12.11□□□□□ -0.47
CMTM3-214ENST00000567572 LELP1Q5T871 98 aa12.11□□□□□ -0.47
CMTM3-214ENST00000567572 CLPSL2Q6UWE3 100 aa12.11□□□□□ -0.47
CMTM3-214ENST00000567572 A0A087WYN8 130 aa12.1□□□□□ -0.47
CMTM3-214ENST00000567572 OR13C6PQ8NH95 151 aa12.09□□□□□ -0.47
CMTM3-214ENST00000567572 C11orf68Q9H3H3 251 aaKnown RBP12.09□□□□□ -0.47
CMTM3-214ENST00000567572 Q9HAA7 133 aa12.09□□□□□ -0.47
CMTM3-214ENST00000567572 OBSCN-AS1Q96MR7 158 aa12.09□□□□□ -0.47
CMTM3-214ENST00000567572 KLK5Q9Y337 293 aaPredicted RBP12.08□□□□□ -0.48
CMTM3-214ENST00000567572 NHLRC4P0CG21 123 aaPredicted RBP12.07□□□□□ -0.48
CMTM3-214ENST00000567572 LINC00167Q96N53 147 aa12.07□□□□□ -0.48
CMTM3-214ENST00000567572 TMEM126AQ9H061 195 aa12.07□□□□□ -0.48
CMTM3-214ENST00000567572 HTN3P15516 51 aa12.06□□□□□ -0.48
CMTM3-214ENST00000567572 LECT2O14960 151 aa12.05□□□□□ -0.48
CMTM3-214ENST00000567572 PRR34Q9NV39 138 aa12.05□□□□□ -0.48
CMTM3-214ENST00000567572 ORMDL1Q9P0S3 153 aa12.04□□□□□ -0.48
CMTM3-214ENST00000567572 A0A0J9YWU9 116 aa12.02□□□□□ -0.49
CMTM3-214ENST00000567572 H3BNG1 76 aa12.01□□□□□ -0.49
CMTM3-214ENST00000567572 NANOS2P60321 138 aaKnown RBP12.01□□□□□ -0.49
CMTM3-214ENST00000567572 GAGE2AQ6NT46 116 aa12.01□□□□□ -0.49
CMTM3-214ENST00000567572 SMCR5Q8TEV8 140 aa12.01□□□□□ -0.49
CMTM3-214ENST00000567572 IGLV10-54A0A075B6I4 117 aa12.01□□□□□ -0.49
CMTM3-214ENST00000567572 SPAG11BQ08648 103 aa12.01□□□□□ -0.49
CMTM3-214ENST00000567572 NOTCH1P46531 2555 aa12.01□□□□□ -0.49
CMTM3-214ENST00000567572 GVQW2A0A096LPI5 108 aaPredicted RBP12□□□□□ -0.49
CMTM3-214ENST00000567572 Q8N3U1 123 aa11.99□□□□□ -0.49
CMTM3-214ENST00000567572 NBEAL1Q6ZS30 2694 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms