RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 LINC00526Q96FQ7 95 aa11.63□□□□□ -0.55
LINC01238-205ENST00000567549 MAP1LC3CQ9BXW4 147 aa11.63□□□□□ -0.55
LINC01238-205ENST00000567549 SCGB1D1O95968 90 aa11.62□□□□□ -0.55
LINC01238-205ENST00000567549 GAGE2BQ13066 116 aa11.62□□□□□ -0.55
LINC01238-205ENST00000567549 A0A0J9YXV3 536 aa11.61□□□□□ -0.55
LINC01238-205ENST00000567549 C3orf79P0CE67 100 aa11.61□□□□□ -0.55
LINC01238-205ENST00000567549 A0A096LNJ9 63 aa11.6□□□□□ -0.55
LINC01238-205ENST00000567549 RNF151Q2KHN1 245 aa11.6□□□□□ -0.55
LINC01238-205ENST00000567549 ATP5LO75964 103 aa11.59□□□□□ -0.55
LINC01238-205ENST00000567549 PET117Q6UWS5 81 aa11.59□□□□□ -0.55
LINC01238-205ENST00000567549 SPANXA1Q9NS26 97 aa11.59□□□□□ -0.55
LINC01238-205ENST00000567549 C20orf202A1L168 122 aa11.58□□□□□ -0.56
LINC01238-205ENST00000567549 SYS1-DBNDD2H3BUS1 97 aa11.58□□□□□ -0.56
LINC01238-205ENST00000567549 RPL18AQ02543 176 aaKnown RBP11.58□□□□□ -0.56
LINC01238-205ENST00000567549 SPAG11BQ08648 103 aa11.58□□□□□ -0.56
LINC01238-205ENST00000567549 S100A12P80511 92 aa11.57□□□□□ -0.56
LINC01238-205ENST00000567549 IFI27L1Q96BM0 104 aa11.57□□□□□ -0.56
LINC01238-205ENST00000567549 RNASE13Q5GAN3 156 aaKnown RBP11.56□□□□□ -0.56
LINC01238-205ENST00000567549 Q6ZUT4 128 aa11.56□□□□□ -0.56
LINC01238-205ENST00000567549 C5orf38Q86SI9 138 aa11.56□□□□□ -0.56
LINC01238-205ENST00000567549 TOMM6Q96B49 74 aa11.56□□□□□ -0.56
LINC01238-205ENST00000567549 CYSLTR1Q9Y271 337 aa11.56□□□□□ -0.56
LINC01238-205ENST00000567549 NDUFA1O15239 70 aa11.55□□□□□ -0.56
LINC01238-205ENST00000567549 MRPS36P82909 103 aaKnown RBP11.55□□□□□ -0.56
LINC01238-205ENST00000567549 LINC00173Q6ZV60 143 aa11.55□□□□□ -0.56
LINC01238-205ENST00000567549 UBR4Q5T4S7 5183 aa11.55□□□□□ -0.56
LINC01238-205ENST00000567549 SRSF9Q13242 221 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC01238-205ENST00000567549 ORAOV1Q8WV07 137 aa11.54□□□□□ -0.56
LINC01238-205ENST00000567549 SCGB3A1Q96QR1 104 aa11.54□□□□□ -0.56
LINC01238-205ENST00000567549 MRPL35Q9NZE8 188 aaKnown RBP11.54□□□□□ -0.56
LINC01238-205ENST00000567549 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.53□□□□□ -0.56
LINC01238-205ENST00000567549 C9orf116Q5BN46 136 aaPredicted RBP11.53□□□□□ -0.56
LINC01238-205ENST00000567549 C2orf66Q6UXQ4 117 aa11.53□□□□□ -0.56
LINC01238-205ENST00000567549 ERASQ7Z444 233 aa11.53□□□□□ -0.56
LINC01238-205ENST00000567549 TMEM141Q96I45 108 aa11.52□□□□□ -0.57
LINC01238-205ENST00000567549 LINC01545Q5VT33 79 aa11.51□□□□□ -0.57
LINC01238-205ENST00000567549 TEX43Q6ZNM6 134 aa11.51□□□□□ -0.57
LINC01238-205ENST00000567549 RPL39P62891 51 aaKnown RBP11.5□□□□□ -0.57
LINC01238-205ENST00000567549 Q6ZN92 141 aa11.5□□□□□ -0.57
LINC01238-205ENST00000567549 IGHV3OR16-9A0A0B4J2B5 98 aa11.49□□□□□ -0.57
LINC01238-205ENST00000567549 KRTAP10-8P60410 259 aa11.49□□□□□ -0.57
LINC01238-205ENST00000567549 TIMM17AQ99595 171 aa11.49□□□□□ -0.57
LINC01238-205ENST00000567549 A0A1W2PNN7 141 aa11.48□□□□□ -0.57
LINC01238-205ENST00000567549 C1orf137Q5JT78 98 aa11.48□□□□□ -0.57
LINC01238-205ENST00000567549 DIRC1Q969H9 104 aa11.48□□□□□ -0.57
LINC01238-205ENST00000567549 VAMP8Q9BV40 100 aa11.48□□□□□ -0.57
LINC01238-205ENST00000567549 PSORS1C2Q9UIG4 136 aa11.48□□□□□ -0.57
LINC01238-205ENST00000567549 TRAV12-1A0A0B4J245 112 aa11.47□□□□□ -0.57
LINC01238-205ENST00000567549 IGIPA6NJ69 53 aa11.47□□□□□ -0.57
LINC01238-205ENST00000567549 H0Y8G0 127 aa11.47□□□□□ -0.57
LINC01238-205ENST00000567549 NPSP0C0P6 89 aa11.47□□□□□ -0.57
LINC01238-205ENST00000567549 TLX1NBP0CAT3 122 aa11.47□□□□□ -0.57
LINC01238-205ENST00000567549 OPRPNQ99935 248 aaPredicted RBP11.47□□□□□ -0.57
LINC01238-205ENST00000567549 PYGO1Q9Y3Y4 419 aa11.47□□□□□ -0.57
LINC01238-205ENST00000567549 PAPPA-AS1Q5QFB9 102 aa11.46□□□□□ -0.57
LINC01238-205ENST00000567549 C2orf88Q9BSF0 95 aa11.46□□□□□ -0.57
LINC01238-205ENST00000567549 A0A087WZ39 114 aa11.44□□□□□ -0.58
LINC01238-205ENST00000567549 TRBV30A0A0K0K1B3 111 aa11.44□□□□□ -0.58
LINC01238-205ENST00000567549 HSBP1L1C9JCN9 74 aa11.44□□□□□ -0.58
LINC01238-205ENST00000567549 TSTD3H0UI37 97 aa11.43□□□□□ -0.58
LINC01238-205ENST00000567549 ODF1Q14990 250 aa11.43□□□□□ -0.58
LINC01238-205ENST00000567549 PHF5AQ7RTV0 110 aaKnown RBP11.43□□□□□ -0.58
LINC01238-205ENST00000567549 PMVKQ15126 192 aa11.42□□□□□ -0.58
LINC01238-205ENST00000567549 LINC01561Q8N1V8 128 aa11.42□□□□□ -0.58
LINC01238-205ENST00000567549 DPM2O94777 84 aa11.41□□□□□ -0.58
LINC01238-205ENST00000567549 IGLV7-43P04211 117 aa11.41□□□□□ -0.58
LINC01238-205ENST00000567549 ATOH7Q8N100 152 aa11.41□□□□□ -0.58
LINC01238-205ENST00000567549 CHTOPQ9Y3Y2 248 aaKnown RBP11.41□□□□□ -0.58
LINC01238-205ENST00000567549 F8VRH5 84 aa11.4□□□□□ -0.58
LINC01238-205ENST00000567549 IGKCP01834 107 aa11.4□□□□□ -0.58
LINC01238-205ENST00000567549 PRSS2P07478 247 aa11.4□□□□□ -0.58
LINC01238-205ENST00000567549 PLNP26678 52 aa11.4□□□□□ -0.58
LINC01238-205ENST00000567549 UBE2BP63146 152 aa11.4□□□□□ -0.58
LINC01238-205ENST00000567549 UNQ6190/PRO20217Q6UXQ8 127 aa11.4□□□□□ -0.58
LINC01238-205ENST00000567549 VCX2Q9H322 139 aa11.4□□□□□ -0.58
LINC01238-205ENST00000567549 PAM16Q9Y3D7 125 aa11.4□□□□□ -0.58
LINC01238-205ENST00000567549 TNXBP22105 4242 aa11.4□□□□□ -0.58
LINC01238-205ENST00000567549 NDUFC2-KCTD14E9PQ53 114 aa11.39□□□□□ -0.59
LINC01238-205ENST00000567549 SEC11AP67812 179 aa11.39□□□□□ -0.59
LINC01238-205ENST00000567549 GAGE2EQ4V326 116 aa11.39□□□□□ -0.59
LINC01238-205ENST00000567549 SPATA45Q537H7 98 aa11.39□□□□□ -0.59
LINC01238-205ENST00000567549 FAM19A5Q7Z5A7 132 aaPredicted RBP11.39□□□□□ -0.59
LINC01238-205ENST00000567549 PMCHL2Q9BQD1 86 aa11.39□□□□□ -0.59
LINC01238-205ENST00000567549 CST9LQ9H4G1 147 aa11.39□□□□□ -0.59
LINC01238-205ENST00000567549 C6orf48Q9UBA6 75 aa11.39□□□□□ -0.59
LINC01238-205ENST00000567549 GAGE2DQ9UEU5 116 aa11.39□□□□□ -0.59
LINC01238-205ENST00000567549 IGLV4-3A0A075B6K6 122 aa11.38□□□□□ -0.59
LINC01238-205ENST00000567549 LINC00242Q5T6M2 205 aa11.38□□□□□ -0.59
LINC01238-205ENST00000567549 FAM104AQ969W3 186 aa11.38□□□□□ -0.59
LINC01238-205ENST00000567549 H0Y9J4 135 aa11.37□□□□□ -0.59
LINC01238-205ENST00000567549 M0QXV9 152 aa11.37□□□□□ -0.59
LINC01238-205ENST00000567549 CKS1BP61024 79 aa11.37□□□□□ -0.59
LINC01238-205ENST00000567549 IGLV1-50A0A075B6I6 118 aa11.36□□□□□ -0.59
LINC01238-205ENST00000567549 PCP4L1A6NKN8 68 aa11.36□□□□□ -0.59
LINC01238-205ENST00000567549 C4orf48Q5BLP8 95 aa11.36□□□□□ -0.59
LINC01238-205ENST00000567549 C10orf25Q5T742 122 aa11.36□□□□□ -0.59
LINC01238-205ENST00000567549 PRO1933Q9H354 126 aa11.36□□□□□ -0.59
LINC01238-205ENST00000567549 AMELXQ99217 191 aa11.35□□□□□ -0.59
LINC01238-205ENST00000567549 RPL13AP40429 203 aaKnown RBP11.34□□□□□ -0.59
LINC01238-205ENST00000567549 UBE2D1P51668 147 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms