RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TCL1BO95988 128 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 IGHV3-33P01772 117 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 TMEM263Q8WUH6 116 aaKnown RBP2.87□□□□□ -1.95
LINC00561-201ENST00000565815 AMELXQ99217 191 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 KLK5Q9Y337 293 aaPredicted RBP2.87□□□□□ -1.95
LINC00561-201ENST00000565815 TRAV2A0A0B4J234 112 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 SNCGO76070 127 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 ACYP1P07311 99 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 PRB3Q04118 309 aaPredicted RBP2.87□□□□□ -1.95
LINC00561-201ENST00000565815 TMEM170BQ5T4T1 132 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 ANKRD29Q8N6D5 301 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 C20orf203Q8NBC4 194 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 PRKDCP78527 4128 aaKnown RBP2.87□□□□□ -1.95
LINC00561-201ENST00000565815 VWFP04275 2813 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 IGHV3-66A0A0C4DH42 116 aa2.86□□□□□ -1.95
LINC00561-201ENST00000565815 G3V318 75 aa2.86□□□□□ -1.95
LINC00561-201ENST00000565815 SNRPD3P62318 126 aaKnown RBP2.86□□□□□ -1.95
LINC00561-201ENST00000565815 DYNC2H1Q8NCM8 4307 aaKnown RBP2.86□□□□□ -1.95
LINC00561-201ENST00000565815 C4orf3Q8WVX3 66 aa2.86□□□□□ -1.95
LINC00561-201ENST00000565815 DNAJC30Q96LL9 226 aa2.86□□□□□ -1.95
LINC00561-201ENST00000565815 CARD19Q96LW7 228 aa2.86□□□□□ -1.95
LINC00561-201ENST00000565815 LINC00467Q9BRT7 94 aa2.86□□□□□ -1.95
LINC00561-201ENST00000565815 ANAPC13Q9BS18 74 aa2.86□□□□□ -1.95
LINC00561-201ENST00000565815 RHPN1-AS1Q9BWJ2 59 aa2.86□□□□□ -1.95
LINC00561-201ENST00000565815 IMUPQ9GZP8 106 aa2.86□□□□□ -1.95
LINC00561-201ENST00000565815 M0QY20 66 aa2.86□□□□□ -1.95
LINC00561-201ENST00000565815 ZNF22P17026 224 aaPredicted RBP2.86□□□□□ -1.95
LINC00561-201ENST00000565815 MRPS36P82909 103 aaKnown RBP2.86□□□□□ -1.95
LINC00561-201ENST00000565815 KIR2DL5BQ8NHK3 375 aa2.86□□□□□ -1.95
LINC00561-201ENST00000565815 IGHV1OR15-1A0A075B7D0 117 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 TRAV8-4A0A0B4J246 113 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 TINCRA0A1B0GVN0 87 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 A8MTW9 85 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 MT-ATP8P03928 68 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 ATP5G1P05496 136 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 ZNRF2Q8NHG8 242 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 TIMM21Q9BVV7 248 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 IGHV3OR16-8A0A075B7F1 116 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 TRAV26-1A0A087WT03 109 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 IGHV1-58A0A0C4DH39 117 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 C9JAW5 83 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 H3BMM0 161 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 GNRH2O43555 120 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 MIAQ16674 131 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 DCANP1Q8TF63 244 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 UBE2WQ96B02 151 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 CUBNO60494 3623 aa2.85□□□□□ -1.95
LINC00561-201ENST00000565815 TSPEAR-AS2P59090 65 aa2.84□□□□□ -1.95
LINC00561-201ENST00000565815 BLCAPP62952 87 aa2.84□□□□□ -1.95
LINC00561-201ENST00000565815 CIRBPQ14011 172 aaKnown RBP2.84□□□□□ -1.95
LINC00561-201ENST00000565815 ZNF56Q15929 161 aa2.84□□□□□ -1.95
LINC00561-201ENST00000565815 TTC32Q5I0X7 151 aa2.84□□□□□ -1.95
LINC00561-201ENST00000565815 UNQ9165/PRO28630Q6UXU0 137 aa2.84□□□□□ -1.95
LINC00561-201ENST00000565815 IGHV3OR16-13A0A075B7E8 117 aa2.84□□□□□ -1.95
LINC00561-201ENST00000565815 IGHV3-49A0A0A0MS15 119 aa2.84□□□□□ -1.95
LINC00561-201ENST00000565815 IGHV3-74A0A0B4J1X5 117 aa2.84□□□□□ -1.95
LINC00561-201ENST00000565815 FAM19A3Q7Z5A8 133 aa2.84□□□□□ -1.95
LINC00561-201ENST00000565815 MUSTN1Q8IVN3 82 aa2.84□□□□□ -1.95
LINC00561-201ENST00000565815 ICOSQ9Y6W8 199 aa2.84□□□□□ -1.95
LINC00561-201ENST00000565815 TRBV7-7A0A0K0K1E9 115 aa2.84□□□□□ -1.96
LINC00561-201ENST00000565815 LST1O00453 97 aa2.84□□□□□ -1.96
LINC00561-201ENST00000565815 IGHV3-30-3P0DP02 117 aa2.84□□□□□ -1.96
LINC00561-201ENST00000565815 RPL39P62891 51 aaKnown RBP2.84□□□□□ -1.96
LINC00561-201ENST00000565815 UBE2E2Q96LR5 201 aa2.84□□□□□ -1.96
LINC00561-201ENST00000565815 VPS13CQ709C8 3753 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 IGLV8-61A0A075B6I0 122 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 NDUFA1O15239 70 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 PRB4P10163 310 aaPredicted RBP2.83□□□□□ -1.96
LINC00561-201ENST00000565815 C2orf82Q6UX34 121 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 Q6ZR54 194 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 TMEM126AQ9H061 195 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 NDUFA12Q9UI09 145 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 TRAV12-3A0A0B4J271 114 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 A0A1B0GVY2 172 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 LY6G6CO95867 125 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 PSMB8P28062 276 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 FAM222AQ5U5X8 452 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 Q6ZQT7 251 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 TMEM61Q8N0U2 210 aa2.83□□□□□ -1.96
LINC00561-201ENST00000565815 CMYA5Q8N3K9 4069 aa2.82□□□□□ -1.96
LINC00561-201ENST00000565815 TRBV12-3P01733 135 aa2.82□□□□□ -1.96
LINC00561-201ENST00000565815 TRACP01848 142 aa2.82□□□□□ -1.96
LINC00561-201ENST00000565815 CXCL5P42830 114 aa2.82□□□□□ -1.96
LINC00561-201ENST00000565815 HERVK_113P63121 156 aa2.82□□□□□ -1.96
LINC00561-201ENST00000565815 CEMP1Q6PRD7 247 aaPredicted RBP2.82□□□□□ -1.96
LINC00561-201ENST00000565815 SFTA2Q6UW10 78 aa2.82□□□□□ -1.96
LINC00561-201ENST00000565815 KRTAP11-1Q8IUC1 163 aa2.82□□□□□ -1.96
LINC00561-201ENST00000565815 TMEM101Q96IK0 257 aa2.82□□□□□ -1.96
LINC00561-201ENST00000565815 CSDC2Q9Y534 153 aaKnown RBP2.82□□□□□ -1.96
LINC00561-201ENST00000565815 RYR3Q15413 4870 aa2.82□□□□□ -1.96
LINC00561-201ENST00000565815 A0A0J9YXV3 536 aa2.82□□□□□ -1.96
LINC00561-201ENST00000565815 DNAH1Q9P2D7 4330 aa2.81□□□□□ -1.96
LINC00561-201ENST00000565815 F6UB75 175 aa2.81□□□□□ -1.96
LINC00561-201ENST00000565815 COX7A2LO14548 114 aa2.81□□□□□ -1.96
LINC00561-201ENST00000565815 IGHV3-53P01767 116 aa2.81□□□□□ -1.96
LINC00561-201ENST00000565815 INAFM2P0DMQ5 153 aa2.81□□□□□ -1.96
LINC00561-201ENST00000565815 FAM74A4Q5TZK3 123 aa2.81□□□□□ -1.96
LINC00561-201ENST00000565815 LINC00643Q86TS7 51 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms