RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 APOMO95445 188 aa9.97□□□□□ -0.81
RNF40-205ENST00000563909 HERVK_113P63121 156 aa9.97□□□□□ -0.81
RNF40-205ENST00000563909 COX6A2Q02221 97 aa9.97□□□□□ -0.81
RNF40-205ENST00000563909 C15orf56Q8N910 161 aa9.97□□□□□ -0.81
RNF40-205ENST00000563909 GEMIN7Q9H840 131 aaKnown RBP9.97□□□□□ -0.81
RNF40-205ENST00000563909 COA6Q5JTJ3 125 aaKnown RBP9.96□□□□□ -0.82
RNF40-205ENST00000563909 HSPB8Q9UJY1 196 aa9.96□□□□□ -0.82
RNF40-205ENST00000563909 A0A087WZ39 114 aa9.95□□□□□ -0.82
RNF40-205ENST00000563909 GVQW2A0A096LPI5 108 aaPredicted RBP9.95□□□□□ -0.82
RNF40-205ENST00000563909 TINCRA0A1B0GVN0 87 aa9.95□□□□□ -0.82
RNF40-205ENST00000563909 CHTF8P0CG12 524 aa9.95□□□□□ -0.82
RNF40-205ENST00000563909 PRR3P79522 188 aaKnown RBP9.95□□□□□ -0.82
RNF40-205ENST00000563909 LINC01561Q8N1V8 128 aa9.95□□□□□ -0.82
RNF40-205ENST00000563909 TRAV12-1A0A0B4J245 112 aa9.94□□□□□ -0.82
RNF40-205ENST00000563909 HIGD2BQ4VC39 106 aa9.94□□□□□ -0.82
RNF40-205ENST00000563909 ZNF561-AS1K7EIQ3 104 aa9.93□□□□□ -0.82
RNF40-205ENST00000563909 FABP4P15090 132 aa9.93□□□□□ -0.82
RNF40-205ENST00000563909 CNBPP62633 177 aaKnown RBP9.93□□□□□ -0.82
RNF40-205ENST00000563909 OR10D4PQ8NGN7 298 aa9.93□□□□□ -0.82
RNF40-205ENST00000563909 PACRGQ96M98 296 aaPredicted RBP9.93□□□□□ -0.82
RNF40-205ENST00000563909 IGHV3-64A0A075B6Q5 118 aa9.92□□□□□ -0.82
RNF40-205ENST00000563909 IGLC3P0DOY3 106 aa9.92□□□□□ -0.82
RNF40-205ENST00000563909 SPINK6Q6UWN8 80 aa9.92□□□□□ -0.82
RNF40-205ENST00000563909 SPACA4Q8TDM5 124 aa9.92□□□□□ -0.82
RNF40-205ENST00000563909 PLAC8Q9NZF1 115 aa9.92□□□□□ -0.82
RNF40-205ENST00000563909 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.91□□□□□ -0.82
RNF40-205ENST00000563909 LINC00469Q8N7U9 141 aa9.91□□□□□ -0.82
RNF40-205ENST00000563909 ORAOV1Q8WV07 137 aa9.91□□□□□ -0.82
RNF40-205ENST00000563909 CDKN2A-AS1Q9UH64 79 aa9.91□□□□□ -0.82
RNF40-205ENST00000563909 CHTOPQ9Y3Y2 248 aaKnown RBP9.91□□□□□ -0.82
RNF40-205ENST00000563909 FSIP2Q5CZC0 6907 aa9.9□□□□□ -0.82
RNF40-205ENST00000563909 IGLV5-45A0A087WSX0 123 aa9.9□□□□□ -0.82
RNF40-205ENST00000563909 IGLV4-69A0A075B6H9 119 aa9.89□□□□□ -0.83
RNF40-205ENST00000563909 H3BRM9 83 aa9.89□□□□□ -0.83
RNF40-205ENST00000563909 SPAG11BQ08648 103 aa9.89□□□□□ -0.83
RNF40-205ENST00000563909 C2orf48Q96LS8 159 aa9.89□□□□□ -0.83
RNF40-205ENST00000563909 MAP1LC3CQ9BXW4 147 aa9.89□□□□□ -0.83
RNF40-205ENST00000563909 F8VRH5 84 aa9.88□□□□□ -0.83
RNF40-205ENST00000563909 F8WDY8 70 aa9.88□□□□□ -0.83
RNF40-205ENST00000563909 H0Y8G0 127 aa9.88□□□□□ -0.83
RNF40-205ENST00000563909 SLPIP03973 132 aa9.88□□□□□ -0.83
RNF40-205ENST00000563909 S100A6P06703 90 aa9.88□□□□□ -0.83
RNF40-205ENST00000563909 LINC00526Q96FQ7 95 aa9.88□□□□□ -0.83
RNF40-205ENST00000563909 CAMK2N2Q96S95 79 aa9.87□□□□□ -0.83
RNF40-205ENST00000563909 MRPL35Q9NZE8 188 aaKnown RBP9.87□□□□□ -0.83
RNF40-205ENST00000563909 C11orf86A6NJI1 115 aa9.86□□□□□ -0.83
RNF40-205ENST00000563909 PRSS2P07478 247 aa9.86□□□□□ -0.83
RNF40-205ENST00000563909 ZNF22P17026 224 aaPredicted RBP9.86□□□□□ -0.83
RNF40-205ENST00000563909 SYCNQ0VAF6 134 aa9.86□□□□□ -0.83
RNF40-205ENST00000563909 SMIM1B2RUZ4 78 aa9.85□□□□□ -0.83
RNF40-205ENST00000563909 TMEM170BQ5T4T1 132 aa9.85□□□□□ -0.83
RNF40-205ENST00000563909 CARD19Q96LW7 228 aa9.85□□□□□ -0.83
RNF40-205ENST00000563909 SPINK8P0C7L1 97 aa9.84□□□□□ -0.83
RNF40-205ENST00000563909 SRSF9Q13242 221 aaKnown RBP eCLIP9.84□□□□□ -0.83
RNF40-205ENST00000563909 KIAA0087Q14695 138 aa9.84□□□□□ -0.83
RNF40-205ENST00000563909 C6orf226Q5I0X4 101 aa9.84□□□□□ -0.83
RNF40-205ENST00000563909 Q8IZM0 81 aa9.84□□□□□ -0.83
RNF40-205ENST00000563909 TOMM7Q9P0U1 55 aa9.84□□□□□ -0.83
RNF40-205ENST00000563909 SYS1-DBNDD2H3BUS1 97 aa9.83□□□□□ -0.84
RNF40-205ENST00000563909 NDUFA1O15239 70 aa9.83□□□□□ -0.84
RNF40-205ENST00000563909 S100A2P29034 98 aa9.83□□□□□ -0.84
RNF40-205ENST00000563909 PKIGQ9Y2B9 76 aa9.83□□□□□ -0.84
RNF40-205ENST00000563909 PLNP26678 52 aa9.82□□□□□ -0.84
RNF40-205ENST00000563909 RNF151Q2KHN1 245 aa9.82□□□□□ -0.84
RNF40-205ENST00000563909 MAJINQ3KP22 176 aa9.82□□□□□ -0.84
RNF40-205ENST00000563909 PET117Q6UWS5 81 aa9.82□□□□□ -0.84
RNF40-205ENST00000563909 HIST3H2BBQ8N257 126 aa9.82□□□□□ -0.84
RNF40-205ENST00000563909 DPM2O94777 84 aa9.81□□□□□ -0.84
RNF40-205ENST00000563909 CXCL5P42830 114 aa9.81□□□□□ -0.84
RNF40-205ENST00000563909 CKS1BP61024 79 aa9.81□□□□□ -0.84
RNF40-205ENST00000563909 COX7B2Q8TF08 81 aa9.81□□□□□ -0.84
RNF40-205ENST00000563909 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
RNF40-205ENST00000563909 IGKCP01834 107 aa9.8□□□□□ -0.84
RNF40-205ENST00000563909 C3orf79P0CE67 100 aa9.8□□□□□ -0.84
RNF40-205ENST00000563909 UNQ6190/PRO20217Q6UXQ8 127 aa9.8□□□□□ -0.84
RNF40-205ENST00000563909 CRCT1Q9UGL9 99 aa9.8□□□□□ -0.84
RNF40-205ENST00000563909 IGKV2-24A0A0C4DH68 120 aa9.79□□□□□ -0.84
RNF40-205ENST00000563909 TMEM223A0PJW6 202 aa9.79□□□□□ -0.84
RNF40-205ENST00000563909 KRTDAPP60985 99 aa9.79□□□□□ -0.84
RNF40-205ENST00000563909 SNRPEP62304 92 aaKnown RBP9.79□□□□□ -0.84
RNF40-205ENST00000563909 STPG4Q8N801 248 aa9.79□□□□□ -0.84
RNF40-205ENST00000563909 PMCHL2Q9BQD1 86 aa9.79□□□□□ -0.84
RNF40-205ENST00000563909 TRBV30A0A0K0K1B3 111 aa9.78□□□□□ -0.84
RNF40-205ENST00000563909 LINC01545Q5VT33 79 aa9.78□□□□□ -0.84
RNF40-205ENST00000563909 C2orf82Q6UX34 121 aa9.78□□□□□ -0.84
RNF40-205ENST00000563909 LOC107984640A0A0U1RRK4 108 aa9.77□□□□□ -0.85
RNF40-205ENST00000563909 C5orf52A6NGY3 159 aa9.77□□□□□ -0.85
RNF40-205ENST00000563909 PRR4Q16378 134 aa9.77□□□□□ -0.85
RNF40-205ENST00000563909 C10orf25Q5T742 122 aa9.77□□□□□ -0.85
RNF40-205ENST00000563909 HIST1H2BLQ99880 126 aa9.77□□□□□ -0.85
RNF40-205ENST00000563909 C6orf48Q9UBA6 75 aa9.77□□□□□ -0.85
RNF40-205ENST00000563909 C20orf202A1L168 122 aa9.76□□□□□ -0.85
RNF40-205ENST00000563909 HERVK_113P61574 105 aa9.75□□□□□ -0.85
RNF40-205ENST00000563909 Q6ZRP5 223 aa9.75□□□□□ -0.85
RNF40-205ENST00000563909 TLX1NBP0CAT3 122 aa9.74□□□□□ -0.85
RNF40-205ENST00000563909 AKR1D1P51857 326 aa9.74□□□□□ -0.85
RNF40-205ENST00000563909 SFTA2Q6UW10 78 aa9.74□□□□□ -0.85
RNF40-205ENST00000563909 LINC00474Q9P2X8 69 aa9.74□□□□□ -0.85
RNF40-205ENST00000563909 PSORS1C2Q9UIG4 136 aa9.74□□□□□ -0.85
RNF40-205ENST00000563909 A0A096LNI7 61 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms