RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 M0R143 59 aa14.57□□□□□ -0.08
LINC01960-201ENST00000563759 CIRBPQ14011 172 aaKnown RBP14.57□□□□□ -0.08
LINC01960-201ENST00000563759 HIGD2BQ4VC39 106 aa14.57□□□□□ -0.08
LINC01960-201ENST00000563759 C15orf56Q8N910 161 aa14.57□□□□□ -0.08
LINC01960-201ENST00000563759 TM2D2Q9BX73 214 aa14.57□□□□□ -0.08
LINC01960-201ENST00000563759 SPANXB1Q9NS25 103 aaPredicted RBP14.57□□□□□ -0.08
LINC01960-201ENST00000563759 ZNF561-AS1K7EIQ3 104 aa14.57□□□□□ -0.08
LINC01960-201ENST00000563759 TAL2Q16559 108 aa14.57□□□□□ -0.08
LINC01960-201ENST00000563759 LINC00526Q96FQ7 95 aa14.57□□□□□ -0.08
LINC01960-201ENST00000563759 GCSHP23434 173 aa14.56□□□□□ -0.08
LINC01960-201ENST00000563759 LY6G6CO95867 125 aa14.55□□□□□ -0.08
LINC01960-201ENST00000563759 SNHG12Q9BXW3 62 aa14.55□□□□□ -0.08
LINC01960-201ENST00000563759 EREGO14944 169 aa14.55□□□□□ -0.08
LINC01960-201ENST00000563759 PSCAO43653 123 aa14.55□□□□□ -0.08
LINC01960-201ENST00000563759 TIMM17BO60830 172 aa14.55□□□□□ -0.08
LINC01960-201ENST00000563759 C6orf223Q8N319 242 aa14.55□□□□□ -0.08
LINC01960-201ENST00000563759 LITAFQ99732 161 aa14.55□□□□□ -0.08
LINC01960-201ENST00000563759 A0A0U1RRA0 63 aa14.54□□□□□ -0.08
LINC01960-201ENST00000563759 BVES-AS1Q5T3Y7 98 aa14.54□□□□□ -0.08
LINC01960-201ENST00000563759 M0R2N4 97 aa14.53□□□□□ -0.08
LINC01960-201ENST00000563759 CEND1Q8N111 149 aa14.52□□□□□ -0.08
LINC01960-201ENST00000563759 LINC00476Q8WZB0 136 aa14.52□□□□□ -0.08
LINC01960-201ENST00000563759 GVQW2A0A096LPI5 108 aaPredicted RBP14.52□□□□□ -0.09
LINC01960-201ENST00000563759 USP17L23D6RBM5 183 aa14.52□□□□□ -0.09
LINC01960-201ENST00000563759 SMIM13P0DJ93 91 aa14.52□□□□□ -0.09
LINC01960-201ENST00000563759 ADAMTSL4-AS1Q5T5F5 129 aa14.52□□□□□ -0.09
LINC01960-201ENST00000563759 DAND5Q8N907 189 aa14.51□□□□□ -0.09
LINC01960-201ENST00000563759 NTN5Q8WTR8 489 aaPredicted RBP14.51□□□□□ -0.09
LINC01960-201ENST00000563759 SPANXDQ9BXN6 97 aa14.51□□□□□ -0.09
LINC01960-201ENST00000563759 SPANXCQ9NY87 97 aa14.51□□□□□ -0.09
LINC01960-201ENST00000563759 ERG28Q9UKR5 140 aa14.51□□□□□ -0.09
LINC01960-201ENST00000563759 CAMK2N2Q96S95 79 aa14.5□□□□□ -0.09
LINC01960-201ENST00000563759 UNQ6190/PRO20217Q6UXQ8 127 aa14.5□□□□□ -0.09
LINC01960-201ENST00000563759 PFN2P35080 140 aa14.49□□□□□ -0.09
LINC01960-201ENST00000563759 PTTG1IPP53801 180 aa14.49□□□□□ -0.09
LINC01960-201ENST00000563759 LECT2O14960 151 aa14.48□□□□□ -0.09
LINC01960-201ENST00000563759 FXYD2P54710 66 aa14.48□□□□□ -0.09
LINC01960-201ENST00000563759 LINC00158P58513 81 aa14.48□□□□□ -0.09
LINC01960-201ENST00000563759 Q6ZVH6 145 aa14.48□□□□□ -0.09
LINC01960-201ENST00000563759 NPC2P61916 151 aa14.48□□□□□ -0.09
LINC01960-201ENST00000563759 C10orf25Q5T742 122 aa14.48□□□□□ -0.09
LINC01960-201ENST00000563759 C2orf48Q96LS8 159 aa14.47□□□□□ -0.09
LINC01960-201ENST00000563759 ALMS1Q8TCU4 4167 aa14.47□□□□□ -0.09
LINC01960-201ENST00000563759 DNAH10Q8IVF4 4471 aa14.46□□□□□ -0.09
LINC01960-201ENST00000563759 KMT2AQ03164 3969 aa14.46□□□□□ -0.09
LINC01960-201ENST00000563759 A0A1B0GV90 55 aa14.46□□□□□ -0.1
LINC01960-201ENST00000563759 C9orf116Q5BN46 136 aaPredicted RBP14.45□□□□□ -0.1
LINC01960-201ENST00000563759 MUSTN1Q8IVN3 82 aa14.45□□□□□ -0.1
LINC01960-201ENST00000563759 MIR7-3HGQ8N6C7 128 aa14.45□□□□□ -0.1
LINC01960-201ENST00000563759 TMEM238LA0A1B0GVL6 79 aa14.44□□□□□ -0.1
LINC01960-201ENST00000563759 A6NJY4 79 aa14.44□□□□□ -0.1
LINC01960-201ENST00000563759 A6NDN8 102 aa14.44□□□□□ -0.1
LINC01960-201ENST00000563759 RPL24P83731 157 aaKnown RBP14.44□□□□□ -0.1
LINC01960-201ENST00000563759 COX17Q14061 63 aa14.44□□□□□ -0.1
LINC01960-201ENST00000563759 Q6ZR54 194 aa14.44□□□□□ -0.1
LINC01960-201ENST00000563759 SVIPQ8NHG7 77 aa14.44□□□□□ -0.1
LINC01960-201ENST00000563759 F8WDY8 70 aa14.43□□□□□ -0.1
LINC01960-201ENST00000563759 IFITM1P13164 125 aa14.43□□□□□ -0.1
LINC01960-201ENST00000563759 COPS9Q8WXC6 57 aa14.43□□□□□ -0.1
LINC01960-201ENST00000563759 C6orf48Q9UBA6 75 aa14.43□□□□□ -0.1
LINC01960-201ENST00000563759 TRBV30A0A0K0K1B3 111 aa14.42□□□□□ -0.1
LINC01960-201ENST00000563759 Q6ZRU5 148 aa14.42□□□□□ -0.1
LINC01960-201ENST00000563759 SYCNQ0VAF6 134 aa14.42□□□□□ -0.1
LINC01960-201ENST00000563759 LINC00308Q8TCZ7 52 aa14.42□□□□□ -0.1
LINC01960-201ENST00000563759 NHP2Q9NX24 153 aaKnown RBP14.42□□□□□ -0.1
LINC01960-201ENST00000563759 WFDC2Q14508 124 aa14.41□□□□□ -0.1
LINC01960-201ENST00000563759 COL5A1-AS1Q5SY13 56 aa14.41□□□□□ -0.1
LINC01960-201ENST00000563759 Q6ZRN7 208 aaPredicted RBP14.41□□□□□ -0.1
LINC01960-201ENST00000563759 PCP4P48539 62 aa14.4□□□□□ -0.1
LINC01960-201ENST00000563759 DNAH6Q9C0G6 4158 aa14.4□□□□□ -0.1
LINC01960-201ENST00000563759 CARD19Q96LW7 228 aa14.39□□□□□ -0.11
LINC01960-201ENST00000563759 A4D1N5 150 aa14.38□□□□□ -0.11
LINC01960-201ENST00000563759 EIF4EBP3O60516 100 aaPredicted RBP14.38□□□□□ -0.11
LINC01960-201ENST00000563759 C14orf177Q52M58 125 aa14.38□□□□□ -0.11
LINC01960-201ENST00000563759 SOSTDC1Q6X4U4 206 aa14.37□□□□□ -0.11
LINC01960-201ENST00000563759 K7ERJ3 54 aa14.36□□□□□ -0.11
LINC01960-201ENST00000563759 C1orf134Q5TEV5 83 aa14.35□□□□□ -0.11
LINC01960-201ENST00000563759 LRCOL1A6NCL2 159 aa14.33□□□□□ -0.11
LINC01960-201ENST00000563759 SLPIP03973 132 aa14.33□□□□□ -0.11
LINC01960-201ENST00000563759 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.33□□□□□ -0.12
LINC01960-201ENST00000563759 PPDPFQ9H3Y8 114 aa14.33□□□□□ -0.12
LINC01960-201ENST00000563759 SND1-IT1Q9HBX3 110 aa14.32□□□□□ -0.12
LINC01960-201ENST00000563759 CFC1BP0CG36 223 aa14.31□□□□□ -0.12
LINC01960-201ENST00000563759 CFC1P0CG37 223 aa14.31□□□□□ -0.12
LINC01960-201ENST00000563759 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.31□□□□□ -0.12
LINC01960-201ENST00000563759 A0A1B0GWB2 263 aa14.31□□□□□ -0.12
LINC01960-201ENST00000563759 NDUFC2-KCTD14E9PQ53 114 aa14.31□□□□□ -0.12
LINC01960-201ENST00000563759 RAB37Q96AX2 223 aa14.31□□□□□ -0.12
LINC01960-201ENST00000563759 RNF151Q2KHN1 245 aa14.3□□□□□ -0.12
LINC01960-201ENST00000563759 A0A0B4J2C4 111 aa14.28□□□□□ -0.12
LINC01960-201ENST00000563759 CNBPP62633 177 aaKnown RBP14.28□□□□□ -0.12
LINC01960-201ENST00000563759 DNAH2Q9P225 4427 aa14.27□□□□□ -0.13
LINC01960-201ENST00000563759 HYDINQ4G0P3 5121 aa14.27□□□□□ -0.13
LINC01960-201ENST00000563759 TAX1BP3O14907 124 aa14.27□□□□□ -0.13
LINC01960-201ENST00000563759 RPL18AQ02543 176 aaKnown RBP14.27□□□□□ -0.13
LINC01960-201ENST00000563759 LOC107984156A0A0G2JMH3 177 aa14.26□□□□□ -0.13
LINC01960-201ENST00000563759 GAGE2EQ4V326 116 aa14.26□□□□□ -0.13
LINC01960-201ENST00000563759 ARL17AQ8IVW1 177 aa14.26□□□□□ -0.13
LINC01960-201ENST00000563759 XAGE1AQ9HD64 81 aa14.26□□□□□ -0.13
LINC01960-201ENST00000563759 GAGE2DQ9UEU5 116 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms