RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 TRBV7-4A0A0J9YYF1 115 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 G3V318 75 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 NCR3O14931 201 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 MIFP14174 115 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 LMO4P61968 165 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 RBM3P98179 157 aaKnown RBP2.42□□□□□ -2.02
LINC01416-201ENST00000563553 ENHOQ6UWT2 76 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 INTS1Q8N201 2190 aaKnown RBP2.42□□□□□ -2.02
LINC01416-201ENST00000563553 C6orf223Q8N319 242 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 Q8N814 137 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 PKIGQ9Y2B9 76 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 ITPR3Q14573 2671 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 MUC4Q99102 2169 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 MUC2Q02817 5179 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 CHD9Q3L8U1 2897 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.42□□□□□ -2.02
LINC01416-201ENST00000563553 LYRM9A8MSI8 78 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 A8MZ25 164 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 F8WEM9 126 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 Q6ZQT0 140 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 C11orf68Q9H3H3 251 aaKnown RBP2.42□□□□□ -2.02
LINC01416-201ENST00000563553 CDC42SE2Q9NRR3 84 aa2.42□□□□□ -2.02
LINC01416-201ENST00000563553 KNL1Q8NG31 2342 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 MED13Q9UHV7 2174 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 CCL18P55774 89 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 COX6A2Q02221 97 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 CD164Q04900 197 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 PMAIP1Q13794 54 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 COX17Q14061 63 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 ESRGQ1W209 222 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 DEFB114Q30KQ6 69 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 C11orf71Q6IPW1 123 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 FAM19A1Q7Z5A9 133 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.41□□□□□ -2.02
LINC01416-201ENST00000563553 LINC01560Q8TB33 94 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 BRK1Q8WUW1 75 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 NCOR2Q9Y618 2525 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 PRRC2AP48634 2157 aaKnown RBP2.41□□□□□ -2.02
LINC01416-201ENST00000563553 IGSF10Q6WRI0 2623 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 A0A087WZ39 114 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 SAA4P35542 130 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 PRB3Q04118 309 aaPredicted RBP2.41□□□□□ -2.02
LINC01416-201ENST00000563553 Q1T7F1 81 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 DEFB109BQ30KR1 87 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 C9orf129Q5T035 196 aaKnown RBP2.41□□□□□ -2.02
LINC01416-201ENST00000563553 ZNF843Q8N446 348 aa2.41□□□□□ -2.02
LINC01416-201ENST00000563553 VWFP04275 2813 aa2.4□□□□□ -2.02
LINC01416-201ENST00000563553 IGHV3-38A0A0C4DH36 116 aa2.4□□□□□ -2.02
LINC01416-201ENST00000563553 A0A0U1RQV1 116 aa2.4□□□□□ -2.02
LINC01416-201ENST00000563553 A0A1B0GW54 56 aa2.4□□□□□ -2.02
LINC01416-201ENST00000563553 CCL21O00585 134 aa2.4□□□□□ -2.02
LINC01416-201ENST00000563553 PLXNB1O43157 2135 aa2.4□□□□□ -2.02
LINC01416-201ENST00000563553 LINC00158P58513 81 aa2.4□□□□□ -2.02
LINC01416-201ENST00000563553 RNASE13Q5GAN3 156 aaKnown RBP2.4□□□□□ -2.02
LINC01416-201ENST00000563553 WFDC11Q8NEX6 87 aa2.4□□□□□ -2.02
LINC01416-201ENST00000563553 TMEM254Q8TBM7 123 aa2.4□□□□□ -2.02
LINC01416-201ENST00000563553 ARRDC1-AS1Q9H2J1 176 aa2.4□□□□□ -2.02
LINC01416-201ENST00000563553 RIF1Q5UIP0 2472 aaKnown RBP2.4□□□□□ -2.03
LINC01416-201ENST00000563553 CFAP54Q96N23 3096 aa2.4□□□□□ -2.03
LINC01416-201ENST00000563553 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
LINC01416-201ENST00000563553 LYNX1G3V0Z9 82 aa2.4□□□□□ -2.03
LINC01416-201ENST00000563553 IGHV4-59P01825 116 aa2.4□□□□□ -2.03
LINC01416-201ENST00000563553 LYNX1P0DP58 116 aa2.4□□□□□ -2.03
LINC01416-201ENST00000563553 NREPQ16612 68 aa2.4□□□□□ -2.03
LINC01416-201ENST00000563553 SPINK13Q1W4C9 94 aa2.4□□□□□ -2.03
LINC01416-201ENST00000563553 Q6ZVQ6 151 aa2.4□□□□□ -2.03
LINC01416-201ENST00000563553 STHQ8IWL8 128 aa2.4□□□□□ -2.03
LINC01416-201ENST00000563553 C11orf72Q8NBR9 251 aa2.4□□□□□ -2.03
LINC01416-201ENST00000563553 RMI2Q96E14 147 aa2.4□□□□□ -2.03
LINC01416-201ENST00000563553 ESM1Q9NQ30 184 aa2.4□□□□□ -2.03
LINC01416-201ENST00000563553 FAM186AA6NE01 2351 aa2.4□□□□□ -2.03
LINC01416-201ENST00000563553 ZGRF1Q86YA3 2104 aa2.4□□□□□ -2.03
LINC01416-201ENST00000563553 A6NDX4 124 aa2.39□□□□□ -2.03
LINC01416-201ENST00000563553 UBE2L6O14933 153 aa2.39□□□□□ -2.03
LINC01416-201ENST00000563553 INSP01308 110 aa2.39□□□□□ -2.03
LINC01416-201ENST00000563553 IGHV4-31P0DP07 118 aa2.39□□□□□ -2.03
LINC01416-201ENST00000563553 FUSP35637 526 aaKnown RBP eCLIP2.39□□□□□ -2.03
LINC01416-201ENST00000563553 DEFB1P60022 68 aa2.39□□□□□ -2.03
LINC01416-201ENST00000563553 NTM-AS1Q6ZSK4 140 aa2.39□□□□□ -2.03
LINC01416-201ENST00000563553 Q8IZM0 81 aa2.39□□□□□ -2.03
LINC01416-201ENST00000563553 CACNA1HO95180 2353 aa2.39□□□□□ -2.03
LINC01416-201ENST00000563553 LCE6AA0A183 80 aa2.39□□□□□ -2.03
LINC01416-201ENST00000563553 LINC00575Q6W349 94 aa2.39□□□□□ -2.03
LINC01416-201ENST00000563553 DEFB104AQ8WTQ1 72 aa2.39□□□□□ -2.03
LINC01416-201ENST00000563553 BPESC1Q9GZL8 116 aa2.39□□□□□ -2.03
LINC01416-201ENST00000563553 NOTCH1P46531 2555 aa2.38□□□□□ -2.03
LINC01416-201ENST00000563553 CHD7Q9P2D1 2997 aa2.38□□□□□ -2.03
LINC01416-201ENST00000563553 SVILO95425 2214 aa2.38□□□□□ -2.03
LINC01416-201ENST00000563553 CNTRLQ7Z7A1 2325 aa2.38□□□□□ -2.03
LINC01416-201ENST00000563553 IGHV3OR16-9A0A0B4J2B5 98 aa2.38□□□□□ -2.03
LINC01416-201ENST00000563553 A0A0U1RRA0 63 aa2.38□□□□□ -2.03
LINC01416-201ENST00000563553 LY6HO94772 140 aa2.38□□□□□ -2.03
LINC01416-201ENST00000563553 DSCR10P59022 87 aa2.38□□□□□ -2.03
LINC01416-201ENST00000563553 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.38□□□□□ -2.03
LINC01416-201ENST00000563553 GVINP1Q7Z2Y8 2422 aa2.38□□□□□ -2.03
LINC01416-201ENST00000563553 GON4LQ3T8J9 2241 aa2.38□□□□□ -2.03
LINC01416-201ENST00000563553 ARHGAP32A7KAX9 2087 aa2.38□□□□□ -2.03
LINC01416-201ENST00000563553 NACAE9PAV3 2078 aa2.38□□□□□ -2.03
LINC01416-201ENST00000563553 IGHV4-30-2A0A087WSY4 118 aa2.37□□□□□ -2.03
LINC01416-201ENST00000563553 TRAV10A0A0B4J240 114 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms