RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 MYO9AB2RTY4 2548 aa9.02□□□□□ -0.97
USB1-207ENST00000563149 KRTAP10-3P60369 221 aa9.01□□□□□ -0.97
USB1-207ENST00000563149 C9orf66Q5T8R8 295 aa9.01□□□□□ -0.97
USB1-207ENST00000563149 CFAP161Q6P656 301 aa9.01□□□□□ -0.97
USB1-207ENST00000563149 MUC7Q8TAX7 377 aa9.01□□□□□ -0.97
USB1-207ENST00000563149 C11orf68Q9H3H3 251 aaKnown RBP9.01□□□□□ -0.97
USB1-207ENST00000563149 USP24Q9UPU5 2620 aa9.01□□□□□ -0.97
USB1-207ENST00000563149 TMEM126AQ9H061 195 aa9.01□□□□□ -0.97
USB1-207ENST00000563149 C14orf132Q9NPU4 83 aa9□□□□□ -0.97
USB1-207ENST00000563149 JMJD7-PLA2G4BH0Y9G9 81 aa8.99□□□□□ -0.97
USB1-207ENST00000563149 Q6JHZ5 121 aa8.99□□□□□ -0.97
USB1-207ENST00000563149 LRRK2Q5S007 2527 aa8.99□□□□□ -0.97
USB1-207ENST00000563149 C9orf129Q5T035 196 aaKnown RBP8.99□□□□□ -0.97
USB1-207ENST00000563149 LINC00269Q8N2A0 174 aa8.99□□□□□ -0.97
USB1-207ENST00000563149 CHCHD10Q8WYQ3 142 aaPredicted RBP8.99□□□□□ -0.97
USB1-207ENST00000563149 UQCRQO14949 82 aa8.98□□□□□ -0.97
USB1-207ENST00000563149 APOC4P55056 127 aa8.98□□□□□ -0.97
USB1-207ENST00000563149 NANOS2P60321 138 aaKnown RBP8.98□□□□□ -0.97
USB1-207ENST00000563149 REG3AQ06141 175 aa8.98□□□□□ -0.97
USB1-207ENST00000563149 CLPSL2Q6UWE3 100 aa8.98□□□□□ -0.97
USB1-207ENST00000563149 C3orf22Q8N5N4 141 aa8.98□□□□□ -0.97
USB1-207ENST00000563149 ITPR3Q14573 2671 aa8.98□□□□□ -0.97
USB1-207ENST00000563149 ZNF469Q96JG9 3925 aaPredicted RBP8.97□□□□□ -0.97
USB1-207ENST00000563149 A0A096LPF7 62 aa8.97□□□□□ -0.97
USB1-207ENST00000563149 TMEM256-PLSCR3K7ERE1 68 aa8.97□□□□□ -0.97
USB1-207ENST00000563149 HIST1H4AP62805 103 aaKnown RBP8.97□□□□□ -0.97
USB1-207ENST00000563149 Q8N814 137 aa8.97□□□□□ -0.97
USB1-207ENST00000563149 APCP25054 2843 aa8.97□□□□□ -0.97
USB1-207ENST00000563149 ANGP03950 147 aaKnown RBP8.96□□□□□ -0.97
USB1-207ENST00000563149 CCKP06307 115 aa8.96□□□□□ -0.97
USB1-207ENST00000563149 ABCA12Q86UK0 2595 aa8.96□□□□□ -0.97
USB1-207ENST00000563149 ATOX1O00244 68 aa8.96□□□□□ -0.98
USB1-207ENST00000563149 NCR3O14931 201 aa8.96□□□□□ -0.98
USB1-207ENST00000563149 SLPIP03973 132 aa8.96□□□□□ -0.98
USB1-207ENST00000563149 DAD1P61803 113 aa8.96□□□□□ -0.98
USB1-207ENST00000563149 S100A7L2Q5SY68 101 aa8.95□□□□□ -0.98
USB1-207ENST00000563149 LINC00526Q96FQ7 95 aa8.95□□□□□ -0.98
USB1-207ENST00000563149 LINC00846Q9NV44 126 aa8.95□□□□□ -0.98
USB1-207ENST00000563149 NOTCH3Q9UM47 2321 aa8.95□□□□□ -0.98
USB1-207ENST00000563149 ANK3Q12955 4377 aaKnown RBP8.94□□□□□ -0.98
USB1-207ENST00000563149 SVIPQ8NHG7 77 aa8.94□□□□□ -0.98
USB1-207ENST00000563149 MIFP14174 115 aa8.94□□□□□ -0.98
USB1-207ENST00000563149 COX7CP15954 63 aa8.94□□□□□ -0.98
USB1-207ENST00000563149 CENPEQ02224 2701 aa8.93□□□□□ -0.98
USB1-207ENST00000563149 EPG5Q9HCE0 2579 aa8.93□□□□□ -0.98
USB1-207ENST00000563149 LELP1Q5T871 98 aa8.93□□□□□ -0.98
USB1-207ENST00000563149 C9orf153Q5TBE3 101 aa8.93□□□□□ -0.98
USB1-207ENST00000563149 DEFB135Q30KP9 77 aa8.92□□□□□ -0.98
USB1-207ENST00000563149 A0A0J9YWU9 116 aa8.91□□□□□ -0.98
USB1-207ENST00000563149 J3QKU1 62 aa8.91□□□□□ -0.98
USB1-207ENST00000563149 IGHV4-30-4P0DP06 118 aa8.91□□□□□ -0.98
USB1-207ENST00000563149 PRR3P79522 188 aaKnown RBP8.91□□□□□ -0.98
USB1-207ENST00000563149 RPL18AQ02543 176 aaKnown RBP8.91□□□□□ -0.98
USB1-207ENST00000563149 SONP18583 2426 aaKnown RBP8.91□□□□□ -0.98
USB1-207ENST00000563149 IGLV10-54A0A075B6I4 117 aa8.91□□□□□ -0.98
USB1-207ENST00000563149 Q8NAQ8 132 aa8.91□□□□□ -0.98
USB1-207ENST00000563149 SETXQ7Z333 2677 aaKnown RBP8.91□□□□□ -0.98
USB1-207ENST00000563149 H3BQ85 93 aa8.9□□□□□ -0.98
USB1-207ENST00000563149 SPART-AS1P0CW21 52 aa8.9□□□□□ -0.98
USB1-207ENST00000563149 SPAG11BQ08648 103 aa8.9□□□□□ -0.98
USB1-207ENST00000563149 ATP5EP2Q5VTU8 51 aa8.9□□□□□ -0.98
USB1-207ENST00000563149 LINC00575Q6W349 94 aa8.9□□□□□ -0.98
USB1-207ENST00000563149 C2orf48Q96LS8 159 aa8.9□□□□□ -0.98
USB1-207ENST00000563149 IGKV3D-7A0A0C4DH55 119 aa8.89□□□□□ -0.99
USB1-207ENST00000563149 C6orf99Q4VX62 202 aa8.89□□□□□ -0.99
USB1-207ENST00000563149 PRR34Q9NV39 138 aa8.89□□□□□ -0.99
USB1-207ENST00000563149 ZFYVE26Q68DK2 2539 aa8.89□□□□□ -0.99
USB1-207ENST00000563149 TLN2Q9Y4G6 2542 aa8.89□□□□□ -0.99
USB1-207ENST00000563149 GVQW2A0A096LPI5 108 aaPredicted RBP8.89□□□□□ -0.99
USB1-207ENST00000563149 CRYGAP11844 174 aa8.89□□□□□ -0.99
USB1-207ENST00000563149 C9orf116Q5BN46 136 aaPredicted RBP8.89□□□□□ -0.99
USB1-207ENST00000563149 C2CD3Q4AC94 2353 aa8.88□□□□□ -0.99
USB1-207ENST00000563149 DEFB4AO15263 64 aa8.88□□□□□ -0.99
USB1-207ENST00000563149 SMR3AQ99954 134 aa8.88□□□□□ -0.99
USB1-207ENST00000563149 FLNAP21333 2647 aaKnown RBP8.88□□□□□ -0.99
USB1-207ENST00000563149 LYPD5Q6UWN5 251 aa8.87□□□□□ -0.99
USB1-207ENST00000563149 Q8N3U1 123 aa8.87□□□□□ -0.99
USB1-207ENST00000563149 CELA1Q9UNI1 258 aa8.87□□□□□ -0.99
USB1-207ENST00000563149 PDZD2O15018 2839 aa8.87□□□□□ -0.99
USB1-207ENST00000563149 hADV29S1A0JD25 119 aa8.86□□□□□ -0.99
USB1-207ENST00000563149 UNQ6190/PRO20217Q6UXQ8 127 aa8.86□□□□□ -0.99
USB1-207ENST00000563149 TRBV10-3A0A0K0K1G6 114 aa8.86□□□□□ -0.99
USB1-207ENST00000563149 CYSRT1A8MQ03 144 aa8.86□□□□□ -0.99
USB1-207ENST00000563149 IGLV6-57P01721 117 aa8.86□□□□□ -0.99
USB1-207ENST00000563149 SMIM20Q8N5G0 67 aa8.86□□□□□ -0.99
USB1-207ENST00000563149 Q8NDZ9 215 aa8.86□□□□□ -0.99
USB1-207ENST00000563149 CUBNO60494 3623 aa8.85□□□□□ -0.99
USB1-207ENST00000563149 ZNF561-AS1K7EIQ3 104 aa8.85□□□□□ -0.99
USB1-207ENST00000563149 C10orf25Q5T742 122 aa8.85□□□□□ -0.99
USB1-207ENST00000563149 SPATA3Q8NHX4 192 aa8.85□□□□□ -0.99
USB1-207ENST00000563149 C6orf223Q8N319 242 aa8.84□□□□□ -0.99
USB1-207ENST00000563149 SERP2Q8N6R1 65 aa8.84□□□□□ -0.99
USB1-207ENST00000563149 NBPF19A0A087WUL8 3843 aa8.84□□□□□ -0.99
USB1-207ENST00000563149 JMJD1CQ15652 2540 aa8.84□□□□□ -0.99
USB1-207ENST00000563149 UBL5Q9BZL1 73 aa8.84□□□□□ -1
USB1-207ENST00000563149 KLK12Q9UKR0 248 aa8.84□□□□□ -1
USB1-207ENST00000563149 NF1P21359 2839 aa8.83□□□□□ -1
USB1-207ENST00000563149 LOC110117498A0A087WWA1 95 aa8.83□□□□□ -1
USB1-207ENST00000563149 RBM3P98179 157 aaKnown RBP8.83□□□□□ -1
USB1-207ENST00000563149 ENHOQ6UWT2 76 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms