RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 CHTOPQ9Y3Y2 248 aaKnown RBP11.11□□□□□ -0.63
CCNDBP1-204ENST00000563065 H0Y8G0 127 aa11.1□□□□□ -0.63
CCNDBP1-204ENST00000563065 PRSS2P07478 247 aa11.1□□□□□ -0.63
CCNDBP1-204ENST00000563065 SPACA4Q8TDM5 124 aa11.1□□□□□ -0.63
CCNDBP1-204ENST00000563065 MRPL35Q9NZE8 188 aaKnown RBP11.1□□□□□ -0.63
CCNDBP1-204ENST00000563065 MAJINQ3KP22 176 aa11.09□□□□□ -0.63
CCNDBP1-204ENST00000563065 C6orf226Q5I0X4 101 aa11.09□□□□□ -0.63
CCNDBP1-204ENST00000563065 TRAV12-1A0A0B4J245 112 aa11.08□□□□□ -0.64
CCNDBP1-204ENST00000563065 F8WDY8 70 aa11.08□□□□□ -0.64
CCNDBP1-204ENST00000563065 GAGE2BQ13066 116 aa11.08□□□□□ -0.64
CCNDBP1-204ENST00000563065 C9orf116Q5BN46 136 aaPredicted RBP11.08□□□□□ -0.64
CCNDBP1-204ENST00000563065 Q8IZM0 81 aa11.08□□□□□ -0.64
CCNDBP1-204ENST00000563065 ABCA13Q86UQ4 5058 aa11.07□□□□□ -0.64
CCNDBP1-204ENST00000563065 A0A087WYN8 130 aa11.07□□□□□ -0.64
CCNDBP1-204ENST00000563065 LOC107984640A0A0U1RRK4 108 aa11.07□□□□□ -0.64
CCNDBP1-204ENST00000563065 RNF151Q2KHN1 245 aa11.07□□□□□ -0.64
CCNDBP1-204ENST00000563065 H3BRM9 83 aa11.06□□□□□ -0.64
CCNDBP1-204ENST00000563065 CKS1BP61024 79 aa11.06□□□□□ -0.64
CCNDBP1-204ENST00000563065 RPL18AQ02543 176 aaKnown RBP11.06□□□□□ -0.64
CCNDBP1-204ENST00000563065 COX7B2Q8TF08 81 aa11.06□□□□□ -0.64
CCNDBP1-204ENST00000563065 PTTG1IPP53801 180 aa11.06□□□□□ -0.64
CCNDBP1-204ENST00000563065 TMEM170BQ5T4T1 132 aa11.06□□□□□ -0.64
CCNDBP1-204ENST00000563065 Q5VSD8 79 aa11.06□□□□□ -0.64
CCNDBP1-204ENST00000563065 HSPB8Q9UJY1 196 aa11.06□□□□□ -0.64
CCNDBP1-204ENST00000563065 ODF1Q14990 250 aa11.05□□□□□ -0.64
CCNDBP1-204ENST00000563065 LINC00528Q8N1L1 170 aa11.05□□□□□ -0.64
CCNDBP1-204ENST00000563065 VPS13BQ7Z7G8 4022 aa11.04□□□□□ -0.64
CCNDBP1-204ENST00000563065 EPM2AB3EWF7 344 aa11.04□□□□□ -0.64
CCNDBP1-204ENST00000563065 F8VRH5 84 aa11.04□□□□□ -0.64
CCNDBP1-204ENST00000563065 Q6ZRP5 223 aa11.04□□□□□ -0.64
CCNDBP1-204ENST00000563065 STPG4Q8N801 248 aa11.04□□□□□ -0.64
CCNDBP1-204ENST00000563065 IGLV5-39A0A0G2JS06 123 aa11.03□□□□□ -0.64
CCNDBP1-204ENST00000563065 TRBV30A0A0K0K1B3 111 aa11.03□□□□□ -0.64
CCNDBP1-204ENST00000563065 PMCHL2Q9BQD1 86 aa11.03□□□□□ -0.64
CCNDBP1-204ENST00000563065 COA6Q5JTJ3 125 aaKnown RBP11.02□□□□□ -0.65
CCNDBP1-204ENST00000563065 PLAC8Q9NZF1 115 aa11.02□□□□□ -0.65
CCNDBP1-204ENST00000563065 PCLOQ9Y6V0 5065 aa11.01□□□□□ -0.65
CCNDBP1-204ENST00000563065 FAM229AH3BQW9 127 aa11.01□□□□□ -0.65
CCNDBP1-204ENST00000563065 GAGE2EQ4V326 116 aa11.01□□□□□ -0.65
CCNDBP1-204ENST00000563065 GAGE2DQ9UEU5 116 aa11.01□□□□□ -0.65
CCNDBP1-204ENST00000563065 PKIGQ9Y2B9 76 aa11.01□□□□□ -0.65
CCNDBP1-204ENST00000563065 TLX1NBP0CAT3 122 aa11□□□□□ -0.65
CCNDBP1-204ENST00000563065 LINC00474Q9P2X8 69 aa11□□□□□ -0.65
CCNDBP1-204ENST00000563065 SRRM2Q9UQ35 2752 aaKnown RBP11□□□□□ -0.65
CCNDBP1-204ENST00000563065 A0A1W2PNN7 141 aa11□□□□□ -0.65
CCNDBP1-204ENST00000563065 TMEM223A0PJW6 202 aa11□□□□□ -0.65
CCNDBP1-204ENST00000563065 MAP1LC3CQ9BXW4 147 aa11□□□□□ -0.65
CCNDBP1-204ENST00000563065 CXCL5P42830 114 aa10.99□□□□□ -0.65
CCNDBP1-204ENST00000563065 NDUFC2-KCTD14E9PQ53 114 aa10.98□□□□□ -0.65
CCNDBP1-204ENST00000563065 FAM168BA1KXE4 195 aa10.97□□□□□ -0.65
CCNDBP1-204ENST00000563065 SYS1-DBNDD2H3BUS1 97 aa10.96□□□□□ -0.65
CCNDBP1-204ENST00000563065 DPM2O94777 84 aa10.95□□□□□ -0.66
CCNDBP1-204ENST00000563065 C9orf129Q5T035 196 aaKnown RBP10.95□□□□□ -0.66
CCNDBP1-204ENST00000563065 KRTAP10-4P60372 401 aaPredicted RBP10.94□□□□□ -0.66
CCNDBP1-204ENST00000563065 ZNF625Q96I27 306 aaPredicted RBP10.94□□□□□ -0.66
CCNDBP1-204ENST00000563065 IGKCP01834 107 aa10.93□□□□□ -0.66
CCNDBP1-204ENST00000563065 PLNP26678 52 aa10.93□□□□□ -0.66
CCNDBP1-204ENST00000563065 KRTAP7-1Q8IUC3 87 aa10.93□□□□□ -0.66
CCNDBP1-204ENST00000563065 XAGE1AQ9HD64 81 aa10.93□□□□□ -0.66
CCNDBP1-204ENST00000563065 PLA2G1BP04054 148 aaKnown RBP10.93□□□□□ -0.66
CCNDBP1-204ENST00000563065 C3orf79P0CE67 100 aa10.93□□□□□ -0.66
CCNDBP1-204ENST00000563065 RPL37AP61513 92 aaKnown RBP10.92□□□□□ -0.66
CCNDBP1-204ENST00000563065 PFN2P35080 140 aa10.91□□□□□ -0.66
CCNDBP1-204ENST00000563065 KRTDAPP60985 99 aa10.91□□□□□ -0.66
CCNDBP1-204ENST00000563065 PHF5AQ7RTV0 110 aaKnown RBP10.91□□□□□ -0.66
CCNDBP1-204ENST00000563065 FAM19A5Q7Z5A7 132 aaPredicted RBP10.91□□□□□ -0.66
CCNDBP1-204ENST00000563065 TSPEAR-AS2P59090 65 aa10.9□□□□□ -0.66
CCNDBP1-204ENST00000563065 LINC01545Q5VT33 79 aa10.9□□□□□ -0.66
CCNDBP1-204ENST00000563065 PET117Q6UWS5 81 aa10.9□□□□□ -0.66
CCNDBP1-204ENST00000563065 INAFM2P0DMQ5 153 aa10.89□□□□□ -0.67
CCNDBP1-204ENST00000563065 HIST3H2BBQ8N257 126 aa10.89□□□□□ -0.67
CCNDBP1-204ENST00000563065 C7orf33Q8WU49 177 aa10.89□□□□□ -0.67
CCNDBP1-204ENST00000563065 ERG28Q9UKR5 140 aa10.88□□□□□ -0.67
CCNDBP1-204ENST00000563065 SERTAD4-AS1Q5TG53 156 aa10.87□□□□□ -0.67
CCNDBP1-204ENST00000563065 LEPROTO15243 131 aa10.87□□□□□ -0.67
CCNDBP1-204ENST00000563065 A0A0U1RRA0 63 aa10.86□□□□□ -0.67
CCNDBP1-204ENST00000563065 S100A6P06703 90 aa10.86□□□□□ -0.67
CCNDBP1-204ENST00000563065 HNRNPA3P51991 378 aaKnown RBP10.86□□□□□ -0.67
CCNDBP1-204ENST00000563065 NDUFA12Q9UI09 145 aa10.86□□□□□ -0.67
CCNDBP1-204ENST00000563065 FLG2Q5D862 2391 aaPredicted RBP10.85□□□□□ -0.67
CCNDBP1-204ENST00000563065 HERVK_113P61574 105 aa10.85□□□□□ -0.67
CCNDBP1-204ENST00000563065 SNRPEP62304 92 aaKnown RBP10.85□□□□□ -0.67
CCNDBP1-204ENST00000563065 KRTAP11-1Q8IUC1 163 aa10.85□□□□□ -0.67
CCNDBP1-204ENST00000563065 HIST1H2BLQ99880 126 aa10.85□□□□□ -0.67
CCNDBP1-204ENST00000563065 PKHD1L1Q86WI1 4243 aa10.85□□□□□ -0.67
CCNDBP1-204ENST00000563065 J3QQQ9 107 aa10.84□□□□□ -0.67
CCNDBP1-204ENST00000563065 PLEKHB2Q96CS7 222 aa10.84□□□□□ -0.67
CCNDBP1-204ENST00000563065 M0QXV9 152 aa10.83□□□□□ -0.68
CCNDBP1-204ENST00000563065 S100A2P29034 98 aa10.83□□□□□ -0.68
CCNDBP1-204ENST00000563065 LINC00158P58513 81 aa10.83□□□□□ -0.68
CCNDBP1-204ENST00000563065 SFTA2Q6UW10 78 aa10.83□□□□□ -0.68
CCNDBP1-204ENST00000563065 MYCBP2O75592 4640 aa10.83□□□□□ -0.68
CCNDBP1-204ENST00000563065 SMIM13P0DJ93 91 aa10.82□□□□□ -0.68
CCNDBP1-204ENST00000563065 PRR3P79522 188 aaKnown RBP10.82□□□□□ -0.68
CCNDBP1-204ENST00000563065 COX17Q14061 63 aa10.82□□□□□ -0.68
CCNDBP1-204ENST00000563065 SND1-IT1Q9HBX3 110 aa10.82□□□□□ -0.68
CCNDBP1-204ENST00000563065 C22orf24Q9Y442 160 aa10.82□□□□□ -0.68
CCNDBP1-204ENST00000563065 MYMXA0A1B0GTQ4 84 aa10.81□□□□□ -0.68
CCNDBP1-204ENST00000563065 E9PLD3 99 aa10.81□□□□□ -0.68
CCNDBP1-204ENST00000563065 LGALS3P17931 250 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms