RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ICOSQ9Y6W8 199 aa6.49□□□□□ -1.37
LINC00838-201ENST00000562956 NBEAL1Q6ZS30 2694 aa6.48□□□□□ -1.37
LINC00838-201ENST00000562956 TENM3Q9P273 2699 aa6.48□□□□□ -1.37
LINC00838-201ENST00000562956 K7EIL1 84 aa6.48□□□□□ -1.37
LINC00838-201ENST00000562956 LITAFQ99732 161 aa6.48□□□□□ -1.37
LINC00838-201ENST00000562956 LINC00959A0A1B0GUT2 108 aa6.47□□□□□ -1.37
LINC00838-201ENST00000562956 PRSS2P07478 247 aa6.47□□□□□ -1.37
LINC00838-201ENST00000562956 CLPSL2Q6UWE3 100 aa6.47□□□□□ -1.37
LINC00838-201ENST00000562956 MUSTN1Q8IVN3 82 aa6.47□□□□□ -1.37
LINC00838-201ENST00000562956 LINC01620Q4KN68 170 aa6.47□□□□□ -1.37
LINC00838-201ENST00000562956 IGHV3OR16-9A0A0B4J2B5 98 aa6.46□□□□□ -1.37
LINC00838-201ENST00000562956 NDUFA1O15239 70 aa6.46□□□□□ -1.37
LINC00838-201ENST00000562956 IGHV3-33P01772 117 aa6.46□□□□□ -1.37
LINC00838-201ENST00000562956 NANOS2P60321 138 aaKnown RBP6.46□□□□□ -1.37
LINC00838-201ENST00000562956 ADAMTSL4-AS1Q5T5F5 129 aa6.46□□□□□ -1.37
LINC00838-201ENST00000562956 DEFB121Q5J5C9 76 aa6.46□□□□□ -1.38
LINC00838-201ENST00000562956 C2orf82Q6UX34 121 aa6.46□□□□□ -1.38
LINC00838-201ENST00000562956 MRAPQ8TCY5 172 aa6.46□□□□□ -1.38
LINC00838-201ENST00000562956 M0QXV9 152 aa6.46□□□□□ -1.38
LINC00838-201ENST00000562956 LELP1Q5T871 98 aa6.46□□□□□ -1.38
LINC00838-201ENST00000562956 CLEC2BQ92478 149 aa6.46□□□□□ -1.38
LINC00838-201ENST00000562956 UBE2WQ96B02 151 aa6.46□□□□□ -1.38
LINC00838-201ENST00000562956 Q9H8V8 135 aa6.46□□□□□ -1.38
LINC00838-201ENST00000562956 LINC00269Q8N2A0 174 aa6.45□□□□□ -1.38
LINC00838-201ENST00000562956 LOC107984640A0A0U1RRK4 108 aa6.45□□□□□ -1.38
LINC00838-201ENST00000562956 XCL1P47992 114 aa6.45□□□□□ -1.38
LINC00838-201ENST00000562956 KPRPQ5T749 579 aaPredicted RBP6.45□□□□□ -1.38
LINC00838-201ENST00000562956 LYPD5Q6UWN5 251 aa6.45□□□□□ -1.38
LINC00838-201ENST00000562956 C5orf38Q86SI9 138 aa6.45□□□□□ -1.38
LINC00838-201ENST00000562956 C11orf45Q8TAV5 145 aa6.45□□□□□ -1.38
LINC00838-201ENST00000562956 ZNF625Q96I27 306 aaPredicted RBP6.45□□□□□ -1.38
LINC00838-201ENST00000562956 TRIAP1O43715 76 aa6.44□□□□□ -1.38
LINC00838-201ENST00000562956 ANGP03950 147 aaKnown RBP6.44□□□□□ -1.38
LINC00838-201ENST00000562956 ATXN8Q156A1 80 aa6.44□□□□□ -1.38
LINC00838-201ENST00000562956 KLK5Q9Y337 293 aaPredicted RBP6.44□□□□□ -1.38
LINC00838-201ENST00000562956 MGAM2Q2M2H8 2515 aa6.44□□□□□ -1.38
LINC00838-201ENST00000562956 A0A087WZ39 114 aa6.44□□□□□ -1.38
LINC00838-201ENST00000562956 TM2D3Q9BRN9 247 aa6.44□□□□□ -1.38
LINC00838-201ENST00000562956 H3BNG1 76 aa6.43□□□□□ -1.38
LINC00838-201ENST00000562956 SS18Q15532 418 aa6.43□□□□□ -1.38
LINC00838-201ENST00000562956 DAND5Q8N907 189 aa6.43□□□□□ -1.38
LINC00838-201ENST00000562956 FAM236AA0A1B0GUQ0 79 aa6.43□□□□□ -1.38
LINC00838-201ENST00000562956 FAM236BA0A1B0GV22 79 aa6.43□□□□□ -1.38
LINC00838-201ENST00000562956 SPANXDQ9BXN6 97 aa6.43□□□□□ -1.38
LINC00838-201ENST00000562956 SPANXCQ9NY87 97 aa6.43□□□□□ -1.38
LINC00838-201ENST00000562956 DEFB131BA0A096LNP1 70 aa6.43□□□□□ -1.38
LINC00838-201ENST00000562956 REG3AQ06141 175 aa6.43□□□□□ -1.38
LINC00838-201ENST00000562956 MIAQ16674 131 aa6.43□□□□□ -1.38
LINC00838-201ENST00000562956 COX7B2Q8TF08 81 aa6.43□□□□□ -1.38
LINC00838-201ENST00000562956 TIMM17BO60830 172 aa6.42□□□□□ -1.38
LINC00838-201ENST00000562956 TOMM7Q9P0U1 55 aa6.42□□□□□ -1.38
LINC00838-201ENST00000562956 IGLV10-54A0A075B6I4 117 aa6.42□□□□□ -1.38
LINC00838-201ENST00000562956 A0A0U1RRA0 63 aa6.42□□□□□ -1.38
LINC00838-201ENST00000562956 TRBV10-2A0A0K0K1G8 114 aa6.41□□□□□ -1.38
LINC00838-201ENST00000562956 CHCHD10Q8WYQ3 142 aaPredicted RBP6.41□□□□□ -1.38
LINC00838-201ENST00000562956 CIRBPQ14011 172 aaKnown RBP6.4□□□□□ -1.39
LINC00838-201ENST00000562956 C9orf153Q5TBE3 101 aa6.4□□□□□ -1.39
LINC00838-201ENST00000562956 WFDC10BQ8IUB3 73 aa6.4□□□□□ -1.39
LINC00838-201ENST00000562956 KLK12Q9UKR0 248 aa6.4□□□□□ -1.39
LINC00838-201ENST00000562956 ESRGQ1W209 222 aa6.39□□□□□ -1.39
LINC00838-201ENST00000562956 CD164L2Q6UWJ8 174 aa6.39□□□□□ -1.39
LINC00838-201ENST00000562956 HUWE1Q7Z6Z7 4374 aaKnown RBP6.39□□□□□ -1.39
LINC00838-201ENST00000562956 Q6Q795 121 aa6.39□□□□□ -1.39
LINC00838-201ENST00000562956 PRR34Q9NV39 138 aa6.39□□□□□ -1.39
LINC00838-201ENST00000562956 ENHOQ6UWT2 76 aa6.39□□□□□ -1.39
LINC00838-201ENST00000562956 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.38□□□□□ -1.39
LINC00838-201ENST00000562956 A0A0B4J2C4 111 aa6.38□□□□□ -1.39
LINC00838-201ENST00000562956 LINC00308Q8TCZ7 52 aa6.38□□□□□ -1.39
LINC00838-201ENST00000562956 COX7A2LO14548 114 aa6.38□□□□□ -1.39
LINC00838-201ENST00000562956 RPL13AP40429 203 aaKnown RBP6.38□□□□□ -1.39
LINC00838-201ENST00000562956 SOSTDC1Q6X4U4 206 aa6.38□□□□□ -1.39
LINC00838-201ENST00000562956 C6orf226Q5I0X4 101 aa6.37□□□□□ -1.39
LINC00838-201ENST00000562956 LINC01561Q8N1V8 128 aa6.37□□□□□ -1.39
LINC00838-201ENST00000562956 TRAV10A0A0B4J240 114 aa6.36□□□□□ -1.39
LINC00838-201ENST00000562956 Q8IZM0 81 aa6.36□□□□□ -1.39
LINC00838-201ENST00000562956 MALP21145 153 aa6.36□□□□□ -1.39
LINC00838-201ENST00000562956 COX6CP09669 75 aa6.36□□□□□ -1.39
LINC00838-201ENST00000562956 TRBV30A0A0K0K1B3 111 aa6.35□□□□□ -1.39
LINC00838-201ENST00000562956 KIAA0087Q14695 138 aa6.35□□□□□ -1.39
LINC00838-201ENST00000562956 MIR7-3HGQ8N6C7 128 aa6.35□□□□□ -1.39
LINC00838-201ENST00000562956 SMCR5Q8TEV8 140 aa6.35□□□□□ -1.39
LINC00838-201ENST00000562956 TMEM126AQ9H061 195 aa6.35□□□□□ -1.39
LINC00838-201ENST00000562956 CRPP02741 224 aa6.34□□□□□ -1.39
LINC00838-201ENST00000562956 PFN2P35080 140 aa6.34□□□□□ -1.39
LINC00838-201ENST00000562956 LINC00158P58513 81 aa6.34□□□□□ -1.39
LINC00838-201ENST00000562956 IBA57-AS1B1ANH7 110 aa6.34□□□□□ -1.39
LINC00838-201ENST00000562956 COL7A1Q02388 2944 aa6.33□□□□□ -1.4
LINC00838-201ENST00000562956 FAM19A5Q7Z5A7 132 aaPredicted RBP6.33□□□□□ -1.4
LINC00838-201ENST00000562956 COPS9Q8WXC6 57 aa6.33□□□□□ -1.4
LINC00838-201ENST00000562956 H3BT86 120 aa6.32□□□□□ -1.4
LINC00838-201ENST00000562956 LINC01556Q5JQF7 62 aa6.32□□□□□ -1.4
LINC00838-201ENST00000562956 C3orf22Q8N5N4 141 aa6.32□□□□□ -1.4
LINC00838-201ENST00000562956 TRBV7-7A0A0K0K1E9 115 aa6.32□□□□□ -1.4
LINC00838-201ENST00000562956 LST1O00453 97 aa6.32□□□□□ -1.4
LINC00838-201ENST00000562956 C6orf223Q8N319 242 aa6.32□□□□□ -1.4
LINC00838-201ENST00000562956 LINC00526Q96FQ7 95 aa6.32□□□□□ -1.4
LINC00838-201ENST00000562956 LINC00588Q9Y4M8 146 aa6.32□□□□□ -1.4
LINC00838-201ENST00000562956 hADV29S1A0JD25 119 aa6.31□□□□□ -1.4
LINC00838-201ENST00000562956 KRTAP26-1Q6PEX3 210 aa6.31□□□□□ -1.4
LINC00838-201ENST00000562956 B9D2Q9BPU9 175 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms