RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 PPDPFLQ8WWR9 84 aa14.66□□□□□ -0.06
VPS9D1-AS1-202ENST00000562866 CHCHD10Q8WYQ3 142 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-AS1-202ENST00000562866 TRAV13-2A0A0B4J235 113 aa14.65□□□□□ -0.06
VPS9D1-AS1-202ENST00000562866 H3BNG1 76 aa14.65□□□□□ -0.06
VPS9D1-AS1-202ENST00000562866 LINC01600Q96MT4 127 aa14.65□□□□□ -0.06
VPS9D1-AS1-202ENST00000562866 C11orf68Q9H3H3 251 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 TRBV10-2A0A0K0K1G8 114 aa14.63□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 ANKRD29Q8N6D5 301 aa14.63□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 SND1-IT1Q9HBX3 110 aa14.62□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 RETNQ9HD89 108 aa14.62□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 NBEAL2Q6ZNJ1 2754 aa14.62□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 LST1O00453 97 aa14.62□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 CXCL5P42830 114 aa14.62□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 CRPP02741 224 aa14.61□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 MALP21145 153 aa14.6□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 CKS1BP61024 79 aa14.6□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 CFAP161Q6P656 301 aa14.6□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 PFN2P35080 140 aa14.6□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 LYPD5Q6UWN5 251 aa14.6□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 Q8N3U1 123 aa14.6□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 CLEC2BQ92478 149 aa14.6□□□□□ -0.07
VPS9D1-AS1-202ENST00000562866 CCL18P55774 89 aa14.58□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 IGLV10-54A0A075B6I4 117 aa14.57□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 H3BT86 120 aa14.57□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 CARD19Q96LW7 228 aa14.57□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 PCP4P48539 62 aa14.57□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 GAGE12HA6NDE8 117 aa14.56□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 KIAA0087Q14695 138 aa14.56□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 PRR34Q9NV39 138 aa14.56□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 COX17Q14061 63 aa14.55□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 KPRPQ5T749 579 aaPredicted RBP14.55□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 SPATA25Q9BR10 227 aa14.55□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 C2orf82Q6UX34 121 aa14.55□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 RPL28P46779 137 aaKnown RBP14.54□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 KLK5Q9Y337 293 aaPredicted RBP14.54□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 IGKV2-28A0A075B6P5 120 aa14.53□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 IGKV2D-28P01615 120 aa14.53□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 KLK12Q9UKR0 248 aa14.53□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 Q6ZTC4 211 aa14.52□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 LINC00337Q8N6G1 96 aa14.52□□□□□ -0.08
VPS9D1-AS1-202ENST00000562866 TRRAPQ9Y4A5 3859 aa14.51□□□□□ -0.09
VPS9D1-AS1-202ENST00000562866 NTN5Q8WTR8 489 aaPredicted RBP14.51□□□□□ -0.09
VPS9D1-AS1-202ENST00000562866 TRAV8-4A0A0B4J246 113 aa14.5□□□□□ -0.09
VPS9D1-AS1-202ENST00000562866 SIGMAR1Q99720 223 aa14.5□□□□□ -0.09
VPS9D1-AS1-202ENST00000562866 TRACP01848 142 aa14.5□□□□□ -0.09
VPS9D1-AS1-202ENST00000562866 A0A0J9YWU9 116 aa14.49□□□□□ -0.09
VPS9D1-AS1-202ENST00000562866 ENHOQ6UWT2 76 aa14.49□□□□□ -0.09
VPS9D1-AS1-202ENST00000562866 MUC7Q8TAX7 377 aa14.48□□□□□ -0.09
VPS9D1-AS1-202ENST00000562866 UBE2WQ96B02 151 aa14.48□□□□□ -0.09
VPS9D1-AS1-202ENST00000562866 C11orf45Q8TAV5 145 aa14.47□□□□□ -0.09
VPS9D1-AS1-202ENST00000562866 SPAG11BQ08648 103 aa14.47□□□□□ -0.09
VPS9D1-AS1-202ENST00000562866 DEFB131BA0A096LNP1 70 aa14.45□□□□□ -0.1
VPS9D1-AS1-202ENST00000562866 NANOS2P60321 138 aaKnown RBP14.45□□□□□ -0.1
VPS9D1-AS1-202ENST00000562866 SMIM11BQ8TCY0 68 aa14.45□□□□□ -0.1
VPS9D1-AS1-202ENST00000562866 H0YGX0 51 aa14.44□□□□□ -0.1
VPS9D1-AS1-202ENST00000562866 NDUFC2O95298 119 aa14.44□□□□□ -0.1
VPS9D1-AS1-202ENST00000562866 WFDC10BQ8IUB3 73 aa14.43□□□□□ -0.1
VPS9D1-AS1-202ENST00000562866 OR13C6PQ8NH95 151 aa14.43□□□□□ -0.1
VPS9D1-AS1-202ENST00000562866 TEX49A0A1B0GTD5 131 aa14.42□□□□□ -0.1
VPS9D1-AS1-202ENST00000562866 CDIP1Q9H305 208 aa14.41□□□□□ -0.1
VPS9D1-AS1-202ENST00000562866 ESRGQ1W209 222 aa14.4□□□□□ -0.1
VPS9D1-AS1-202ENST00000562866 FAM218AQ96MZ4 157 aa14.39□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 FBN1P35555 2871 aaKnown RBP14.39□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 GVQW2A0A096LPI5 108 aaPredicted RBP14.38□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 SCGB1A1P11684 91 aa14.38□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 UNQ6190/PRO20217Q6UXQ8 127 aa14.38□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 C9orf116Q5BN46 136 aaPredicted RBP14.37□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 DEFB121Q5J5C9 76 aa14.37□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 C6orf223Q8N319 242 aa14.37□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 BAALC-AS2P0C853 105 aa14.36□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 C21orf62-AS1Q17RA5 79 aa14.36□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 LINC01556Q5JQF7 62 aa14.35□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 C10orf25Q5T742 122 aa14.35□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 TRAV10A0A0B4J240 114 aa14.34□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 DNAL4O96015 105 aa14.34□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 TM2D3Q9BRN9 247 aa14.34□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 TMEM126AQ9H061 195 aa14.34□□□□□ -0.11
VPS9D1-AS1-202ENST00000562866 C15orf53Q8NAA6 179 aa14.33□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 CMYA5Q8N3K9 4069 aa14.32□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 KRTAP26-1Q6PEX3 210 aa14.32□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 LINC00526Q96FQ7 95 aa14.32□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 STAB1Q9NY15 2570 aa14.32□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 ZNF561-AS1K7EIQ3 104 aa14.31□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 K7EIL1 84 aa14.3□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 C1orf43Q9BWL3 253 aa14.3□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 A0A087WYN8 130 aa14.29□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 FAM240AA0A1B0GVK7 77 aa14.29□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 PRR3P79522 188 aaKnown RBP14.29□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 DNAH3Q8TD57 4116 aa14.29□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 Q9HAA7 133 aa14.29□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 PRB2P02812 416 aaPredicted RBP14.28□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 XGP55808 180 aa14.28□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 C6orf48Q9UBA6 75 aa14.28□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 A0A1B0GX51 115 aa14.27□□□□□ -0.12
VPS9D1-AS1-202ENST00000562866 F8WDY8 70 aa14.27□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 DNAH10OSP0CZ25 163 aa14.27□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 S100A7L2Q5SY68 101 aa14.27□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 CAMK2N2Q96S95 79 aa14.27□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 NCR3O14931 201 aa14.26□□□□□ -0.13
VPS9D1-AS1-202ENST00000562866 C2orf48Q96LS8 159 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms