RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 TMEM167AQ8TBQ9 72 aa6.24□□□□□ -1.41
CDH1-205ENST00000562836 DPM3Q9P2X0 92 aa6.24□□□□□ -1.41
CDH1-205ENST00000562836 NCOR1O75376 2440 aa6.24□□□□□ -1.41
CDH1-205ENST00000562836 IGHV3OR16-8A0A075B7F1 116 aa6.24□□□□□ -1.41
CDH1-205ENST00000562836 NDUFB1O75438 58 aa6.24□□□□□ -1.41
CDH1-205ENST00000562836 IGLV1-44P01699 117 aa6.24□□□□□ -1.41
CDH1-205ENST00000562836 SPAG11AQ6PDA7 123 aa6.24□□□□□ -1.41
CDH1-205ENST00000562836 ST20-AS1Q8NBB2 130 aa6.24□□□□□ -1.41
CDH1-205ENST00000562836 GAFA1Q96PS6 74 aa6.24□□□□□ -1.41
CDH1-205ENST00000562836 SPAG11BQ08648 103 aa6.23□□□□□ -1.41
CDH1-205ENST00000562836 BDP1A6H8Y1 2624 aa6.23□□□□□ -1.41
CDH1-205ENST00000562836 DNAJC9-AS1A6NH13 148 aa6.23□□□□□ -1.41
CDH1-205ENST00000562836 COX7B2Q8TF08 81 aa6.23□□□□□ -1.41
CDH1-205ENST00000562836 COL27A1Q8IZC6 1860 aaPredicted RBP6.23□□□□□ -1.41
CDH1-205ENST00000562836 PATE3B3GLJ2 98 aa6.23□□□□□ -1.41
CDH1-205ENST00000562836 NOTCH2NLQ7Z3S9 236 aa6.22□□□□□ -1.41
CDH1-205ENST00000562836 GPR179Q6PRD1 2367 aa6.22□□□□□ -1.41
CDH1-205ENST00000562836 PRR9Q5T870 116 aa6.22□□□□□ -1.41
CDH1-205ENST00000562836 LINC01558Q9Y6Z2 57 aa6.22□□□□□ -1.41
CDH1-205ENST00000562836 CR1P17927 2039 aa6.21□□□□□ -1.42
CDH1-205ENST00000562836 TECTAO75443 2155 aa6.21□□□□□ -1.42
CDH1-205ENST00000562836 TRGV2A0A075B6R0 118 aa6.21□□□□□ -1.42
CDH1-205ENST00000562836 CDK2AP2O75956 126 aa6.2□□□□□ -1.42
CDH1-205ENST00000562836 LOC400499M0QZD8 3231 aa6.2□□□□□ -1.42
CDH1-205ENST00000562836 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.2□□□□□ -1.42
CDH1-205ENST00000562836 MUC7Q8TAX7 377 aa6.2□□□□□ -1.42
CDH1-205ENST00000562836 RNASE3P12724 160 aaKnown RBP6.19□□□□□ -1.42
CDH1-205ENST00000562836 COX6A2Q02221 97 aa6.19□□□□□ -1.42
CDH1-205ENST00000562836 TMEM105Q8N8V8 129 aa6.19□□□□□ -1.42
CDH1-205ENST00000562836 I3L2K1 104 aa6.19□□□□□ -1.42
CDH1-205ENST00000562836 DEFB112Q30KQ8 113 aa6.19□□□□□ -1.42
CDH1-205ENST00000562836 COA5Q86WW8 74 aa6.19□□□□□ -1.42
CDH1-205ENST00000562836 CACNA1GO43497 2377 aa6.19□□□□□ -1.42
CDH1-205ENST00000562836 CFAP47Q6ZTR5 3102 aa6.19□□□□□ -1.42
CDH1-205ENST00000562836 TTC28Q96AY4 2481 aa6.18□□□□□ -1.42
CDH1-205ENST00000562836 IGLV5-39A0A0G2JS06 123 aa6.18□□□□□ -1.42
CDH1-205ENST00000562836 ETDCA0A1B0GVM5 59 aa6.18□□□□□ -1.42
CDH1-205ENST00000562836 LY6G6DO95868 133 aa6.18□□□□□ -1.42
CDH1-205ENST00000562836 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
CDH1-205ENST00000562836 A0A087X002 238 aa6.18□□□□□ -1.42
CDH1-205ENST00000562836 A0A096LNT2 108 aa6.18□□□□□ -1.42
CDH1-205ENST00000562836 IGLV9-49A0A0B4J1Y8 123 aa6.18□□□□□ -1.42
CDH1-205ENST00000562836 TRBV6-4A0A1B0GX49 114 aa6.18□□□□□ -1.42
CDH1-205ENST00000562836 CCL18P55774 89 aa6.18□□□□□ -1.42
CDH1-205ENST00000562836 PLAC8Q9NZF1 115 aa6.18□□□□□ -1.42
CDH1-205ENST00000562836 LAMA5O15230 3695 aa6.18□□□□□ -1.42
CDH1-205ENST00000562836 IGLV2-23P01705 113 aa6.17□□□□□ -1.42
CDH1-205ENST00000562836 ZFAND2AQ8N6M9 145 aa6.17□□□□□ -1.42
CDH1-205ENST00000562836 ZFHX4Q86UP3 3567 aa6.17□□□□□ -1.42
CDH1-205ENST00000562836 ICE1Q9Y2F5 2266 aa6.17□□□□□ -1.42
CDH1-205ENST00000562836 LINC00158P58513 81 aa6.17□□□□□ -1.42
CDH1-205ENST00000562836 DMXL1Q9Y485 3027 aa6.16□□□□□ -1.42
CDH1-205ENST00000562836 LINC00959A0A1B0GUT2 108 aa6.16□□□□□ -1.42
CDH1-205ENST00000562836 A0A1W2PNU3 283 aaPredicted RBP6.15□□□□□ -1.42
CDH1-205ENST00000562836 M0QY20 66 aa6.15□□□□□ -1.42
CDH1-205ENST00000562836 DEFB108BQ8NET1 73 aa6.15□□□□□ -1.42
CDH1-205ENST00000562836 SMIM1B2RUZ4 78 aa6.15□□□□□ -1.43
CDH1-205ENST00000562836 MRGPRG-AS1Q2M3A8 158 aa6.15□□□□□ -1.43
CDH1-205ENST00000562836 IGLV5-45A0A087WSX0 123 aa6.14□□□□□ -1.43
CDH1-205ENST00000562836 IGHV1-46P01743 117 aa6.14□□□□□ -1.43
CDH1-205ENST00000562836 Q8NDZ9 215 aa6.14□□□□□ -1.43
CDH1-205ENST00000562836 SPENQ96T58 3664 aaKnown RBP6.14□□□□□ -1.43
CDH1-205ENST00000562836 K7EIM0 57 aa6.13□□□□□ -1.43
CDH1-205ENST00000562836 CNBPP62633 177 aaKnown RBP6.13□□□□□ -1.43
CDH1-205ENST00000562836 FRYQ5TBA9 3013 aa6.13□□□□□ -1.43
CDH1-205ENST00000562836 ODF3L2Q3SX64 289 aa6.13□□□□□ -1.43
CDH1-205ENST00000562836 SPANXA2-OT1Q8N9U9 137 aa6.13□□□□□ -1.43
CDH1-205ENST00000562836 PRRC2CQ9Y520 2896 aaKnown RBP6.13□□□□□ -1.43
CDH1-205ENST00000562836 IGKV3-20P01619 116 aa6.12□□□□□ -1.43
CDH1-205ENST00000562836 CHTF8P0CG12 524 aa6.12□□□□□ -1.43
CDH1-205ENST00000562836 CCL3L1P16619 93 aa6.12□□□□□ -1.43
CDH1-205ENST00000562836 EP300Q09472 2414 aaPredicted RBP6.12□□□□□ -1.43
CDH1-205ENST00000562836 TRGV4A0A0C4DH28 118 aa6.12□□□□□ -1.43
CDH1-205ENST00000562836 IGHV3-66A0A0C4DH42 116 aa6.11□□□□□ -1.43
CDH1-205ENST00000562836 KLK12Q9UKR0 248 aa6.11□□□□□ -1.43
CDH1-205ENST00000562836 CACNA1HO95180 2353 aa6.11□□□□□ -1.43
CDH1-205ENST00000562836 BOD1L1Q8NFC6 3051 aa6.11□□□□□ -1.43
CDH1-205ENST00000562836 IGHV3-35A0A0C4DH35 117 aa6.11□□□□□ -1.43
CDH1-205ENST00000562836 H0Y9P7 68 aa6.1□□□□□ -1.43
CDH1-205ENST00000562836 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.1□□□□□ -1.43
CDH1-205ENST00000562836 NDUFAF8A1L188 74 aa6.09□□□□□ -1.43
CDH1-205ENST00000562836 A8MWP4 228 aa6.09□□□□□ -1.43
CDH1-205ENST00000562836 IGLV11-55A0A075B6I3 123 aa6.09□□□□□ -1.43
CDH1-205ENST00000562836 IGHV3OR16-12A0A075B7B8 117 aa6.09□□□□□ -1.43
CDH1-205ENST00000562836 IGHV3-74A0A0B4J1X5 117 aa6.09□□□□□ -1.43
CDH1-205ENST00000562836 LUZP6Q538Z0 58 aa6.09□□□□□ -1.43
CDH1-205ENST00000562836 DCHS1Q96JQ0 3298 aa6.09□□□□□ -1.43
CDH1-205ENST00000562836 IGHV3-23P01764 117 aa6.08□□□□□ -1.44
CDH1-205ENST00000562836 LINC00575Q6W349 94 aa6.08□□□□□ -1.44
CDH1-205ENST00000562836 C8orf17Q9NRJ1 99 aa6.07□□□□□ -1.44
CDH1-205ENST00000562836 RNF5Q99942 180 aa6.07□□□□□ -1.44
CDH1-205ENST00000562836 TOMM7Q9P0U1 55 aa6.07□□□□□ -1.44
CDH1-205ENST00000562836 KAAG1Q9UBP8 84 aa6.07□□□□□ -1.44
CDH1-205ENST00000562836 CNOT1A5YKK6 2376 aaKnown RBP6.07□□□□□ -1.44
CDH1-205ENST00000562836 LINC00467Q9BRT7 94 aa6.06□□□□□ -1.44
CDH1-205ENST00000562836 A8MTW9 85 aa6.06□□□□□ -1.44
CDH1-205ENST00000562836 Q6ZQY7 126 aa6.06□□□□□ -1.44
CDH1-205ENST00000562836 CHCHD7Q9BUK0 85 aa6.06□□□□□ -1.44
CDH1-205ENST00000562836 IGHV7-81A0A0B4J1V7 117 aa6.05□□□□□ -1.44
CDH1-205ENST00000562836 COX7BP24311 80 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms