RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 REG3AQ06141 175 aa3.22□□□□□ -1.89
TCF4-215ENST00000562638 HIGD2BQ4VC39 106 aa3.22□□□□□ -1.89
TCF4-215ENST00000562638 SPINK14Q6IE38 97 aa3.22□□□□□ -1.89
TCF4-215ENST00000562638 Q8N9L7 120 aa3.22□□□□□ -1.89
TCF4-215ENST00000562638 PTPRQQ9UMZ3 2332 aa3.21□□□□□ -1.89
TCF4-215ENST00000562638 IGLV7-46A0A075B6I9 117 aa3.21□□□□□ -1.9
TCF4-215ENST00000562638 IGHV3-23P01764 117 aa3.21□□□□□ -1.9
TCF4-215ENST00000562638 P0C880 135 aa3.21□□□□□ -1.9
TCF4-215ENST00000562638 LINC00158P58513 81 aa3.21□□□□□ -1.9
TCF4-215ENST00000562638 DSCR9P59020 149 aa3.21□□□□□ -1.9
TCF4-215ENST00000562638 PRR4Q16378 134 aa3.21□□□□□ -1.9
TCF4-215ENST00000562638 SPATA8Q6RVD6 105 aa3.21□□□□□ -1.9
TCF4-215ENST00000562638 DEFB104AQ8WTQ1 72 aa3.21□□□□□ -1.9
TCF4-215ENST00000562638 PCNTO95613 3336 aa3.21□□□□□ -1.9
TCF4-215ENST00000562638 CENPFP49454 3210 aa3.21□□□□□ -1.9
TCF4-215ENST00000562638 SRCAPQ6ZRS2 3230 aa3.21□□□□□ -1.9
TCF4-215ENST00000562638 H0Y9P7 68 aa3.2□□□□□ -1.9
TCF4-215ENST00000562638 IGHV1-2P23083 117 aa3.2□□□□□ -1.9
TCF4-215ENST00000562638 SEC61BP60468 96 aaKnown RBP3.2□□□□□ -1.9
TCF4-215ENST00000562638 CXCL17Q6UXB2 119 aa3.2□□□□□ -1.9
TCF4-215ENST00000562638 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.2□□□□□ -1.9
TCF4-215ENST00000562638 PLCE1Q9P212 2302 aa3.2□□□□□ -1.9
TCF4-215ENST00000562638 CDK2AP2O75956 126 aa3.19□□□□□ -1.9
TCF4-215ENST00000562638 APELAP0DMC3 54 aa3.19□□□□□ -1.9
TCF4-215ENST00000562638 SPAG11BQ08648 103 aa3.19□□□□□ -1.9
TCF4-215ENST00000562638 NPBQ8NG41 125 aa3.19□□□□□ -1.9
TCF4-215ENST00000562638 CNTRLQ7Z7A1 2325 aa3.19□□□□□ -1.9
TCF4-215ENST00000562638 A0A087WSZ3 146 aa3.18□□□□□ -1.9
TCF4-215ENST00000562638 IGHV4-61A0A0C4DH41 118 aa3.18□□□□□ -1.9
TCF4-215ENST00000562638 KRTAP16-1A8MUX0 517 aa3.18□□□□□ -1.9
TCF4-215ENST00000562638 SPAG11AQ6PDA7 123 aa3.18□□□□□ -1.9
TCF4-215ENST00000562638 Q6ZQY7 126 aa3.18□□□□□ -1.9
TCF4-215ENST00000562638 SPRR4Q96PI1 79 aa3.18□□□□□ -1.9
TCF4-215ENST00000562638 PRR34Q9NV39 138 aa3.18□□□□□ -1.9
TCF4-215ENST00000562638 TRGV4A0A0C4DH28 118 aa3.17□□□□□ -1.9
TCF4-215ENST00000562638 IGHV1-46P01743 117 aa3.17□□□□□ -1.9
TCF4-215ENST00000562638 PRB1P04280 392 aa3.17□□□□□ -1.9
TCF4-215ENST00000562638 PRB3Q04118 309 aaPredicted RBP3.17□□□□□ -1.9
TCF4-215ENST00000562638 MIR22HGQ0VDD5 57 aa3.17□□□□□ -1.9
TCF4-215ENST00000562638 CNEP1R1Q8N9A8 125 aa3.17□□□□□ -1.9
TCF4-215ENST00000562638 SPTY2D1-AS1A0A0U1RR47 76 aa3.16□□□□□ -1.9
TCF4-215ENST00000562638 CCL3L1P16619 93 aa3.16□□□□□ -1.9
TCF4-215ENST00000562638 REG3GQ6UW15 175 aa3.16□□□□□ -1.9
TCF4-215ENST00000562638 CR1P17927 2039 aa3.15□□□□□ -1.9
TCF4-215ENST00000562638 COL6A3P12111 3177 aa3.15□□□□□ -1.9
TCF4-215ENST00000562638 IGLV1-50A0A075B6I6 118 aa3.15□□□□□ -1.91
TCF4-215ENST00000562638 IGKV2D-24A0A075B6R9 120 aa3.15□□□□□ -1.91
TCF4-215ENST00000562638 ZNF861PO60384 105 aa3.15□□□□□ -1.91
TCF4-215ENST00000562638 DSCR10P59022 87 aa3.15□□□□□ -1.91
TCF4-215ENST00000562638 KRTAP10-2P60368 255 aa3.15□□□□□ -1.91
TCF4-215ENST00000562638 MRPS21P82921 87 aaKnown RBP3.15□□□□□ -1.91
TCF4-215ENST00000562638 KRTAP25-1Q3LHN0 102 aa3.15□□□□□ -1.91
TCF4-215ENST00000562638 KAAG1Q9UBP8 84 aa3.15□□□□□ -1.91
TCF4-215ENST00000562638 FAM215AQ9Y5M1 114 aa3.15□□□□□ -1.91
TCF4-215ENST00000562638 PRRC2BQ5JSZ5 2229 aaKnown RBP3.15□□□□□ -1.91
TCF4-215ENST00000562638 CEP350Q5VT06 3117 aa3.14□□□□□ -1.91
TCF4-215ENST00000562638 KIAA0100Q14667 2235 aaKnown RBP3.14□□□□□ -1.91
TCF4-215ENST00000562638 IGLV5-37A0A075B6J1 123 aa3.14□□□□□ -1.91
TCF4-215ENST00000562638 KRTAP29-1A8MX34 341 aaPredicted RBP3.14□□□□□ -1.91
TCF4-215ENST00000562638 ODF3BA8MYP8 253 aa3.14□□□□□ -1.91
TCF4-215ENST00000562638 INAFM1C9JVW0 142 aa3.14□□□□□ -1.91
TCF4-215ENST00000562638 IGKV3-20P01619 116 aa3.14□□□□□ -1.91
TCF4-215ENST00000562638 IGLV6-57P01721 117 aa3.14□□□□□ -1.91
TCF4-215ENST00000562638 COX17Q14061 63 aa3.14□□□□□ -1.91
TCF4-215ENST00000562638 DEFB112Q30KQ8 113 aa3.14□□□□□ -1.91
TCF4-215ENST00000562638 LINC00483Q53H64 154 aa3.14□□□□□ -1.91
TCF4-215ENST00000562638 KRTAP9-8Q9BYQ0 159 aa3.14□□□□□ -1.91
TCF4-215ENST00000562638 KLK12Q9UKR0 248 aa3.14□□□□□ -1.91
TCF4-215ENST00000562638 IGLV5-48A0A075B6I7 105 aa3.13□□□□□ -1.91
TCF4-215ENST00000562638 PRB2P02812 416 aaPredicted RBP3.13□□□□□ -1.91
TCF4-215ENST00000562638 MSMBP08118 114 aa3.13□□□□□ -1.91
TCF4-215ENST00000562638 CCL14Q16627 93 aa3.13□□□□□ -1.91
TCF4-215ENST00000562638 Q8N9W7 124 aa3.13□□□□□ -1.91
TCF4-215ENST00000562638 ZNF318Q5VUA4 2279 aa3.13□□□□□ -1.91
TCF4-215ENST00000562638 ABCA1O95477 2261 aa3.11□□□□□ -1.91
TCF4-215ENST00000562638 DEFB131BA0A096LNP1 70 aa3.11□□□□□ -1.91
TCF4-215ENST00000562638 IGLV9-49A0A0B4J1Y8 123 aa3.11□□□□□ -1.91
TCF4-215ENST00000562638 IGHV4-28A0A0C4DH34 117 aa3.11□□□□□ -1.91
TCF4-215ENST00000562638 C1orf137Q5JT78 98 aa3.11□□□□□ -1.91
TCF4-215ENST00000562638 KRTAP26-1Q6PEX3 210 aa3.11□□□□□ -1.91
TCF4-215ENST00000562638 Q6ZSN1 163 aa3.11□□□□□ -1.91
TCF4-215ENST00000562638 Q8IZM0 81 aa3.11□□□□□ -1.91
TCF4-215ENST00000562638 ALMS1Q8TCU4 4167 aa3.11□□□□□ -1.91
TCF4-215ENST00000562638 ASCC3Q8N3C0 2202 aaKnown RBP3.11□□□□□ -1.91
TCF4-215ENST00000562638 KRTAP4-16G5E9R7 235 aaPredicted RBP3.1□□□□□ -1.91
TCF4-215ENST00000562638 K7EQZ3 153 aa3.1□□□□□ -1.91
TCF4-215ENST00000562638 IGHV3-11P01762 117 aa3.1□□□□□ -1.91
TCF4-215ENST00000562638 HRES1P13985 223 aa3.1□□□□□ -1.91
TCF4-215ENST00000562638 CMC4P56277 68 aaPredicted RBP3.1□□□□□ -1.91
TCF4-215ENST00000562638 PROK1P58294 105 aa3.1□□□□□ -1.91
TCF4-215ENST00000562638 C20orf166-AS1Q96NR2 134 aa3.1□□□□□ -1.91
TCF4-215ENST00000562638 WDR87Q6ZQQ6 2873 aa3.09□□□□□ -1.91
TCF4-215ENST00000562638 A8MTW9 85 aa3.09□□□□□ -1.91
TCF4-215ENST00000562638 PATE3B3GLJ2 98 aa3.09□□□□□ -1.91
TCF4-215ENST00000562638 CHTF8P0CG12 524 aa3.09□□□□□ -1.91
TCF4-215ENST00000562638 MINOS1Q5TGZ0 78 aa3.09□□□□□ -1.91
TCF4-215ENST00000562638 DPM3Q9P2X0 92 aa3.09□□□□□ -1.91
TCF4-215ENST00000562638 URB1O60287 2271 aaKnown RBP3.08□□□□□ -1.92
TCF4-215ENST00000562638 UQCR11O14957 56 aa3.08□□□□□ -1.92
TCF4-215ENST00000562638 DEFB1P60022 68 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms