RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 GNB1LQ9BYB4 327 aa8.22□□□□□ -1.09
USB1-205ENST00000561743 LINC01546A6NGU7 62 aa8.21□□□□□ -1.1
USB1-205ENST00000561743 S100PP25815 95 aa8.21□□□□□ -1.1
USB1-205ENST00000561743 C6orf226Q5I0X4 101 aa8.21□□□□□ -1.1
USB1-205ENST00000561743 ERASQ7Z444 233 aa8.21□□□□□ -1.1
USB1-205ENST00000561743 ALKBH7Q9BT30 221 aaPredicted RBP8.21□□□□□ -1.1
USB1-205ENST00000561743 GEMIN7Q9H840 131 aaKnown RBP8.21□□□□□ -1.1
USB1-205ENST00000561743 DIRC1Q969H9 104 aa8.2□□□□□ -1.1
USB1-205ENST00000561743 SCGB3A1Q96QR1 104 aa8.2□□□□□ -1.1
USB1-205ENST00000561743 UBE2BP63146 152 aa8.19□□□□□ -1.1
USB1-205ENST00000561743 COMMD7Q86VX2 200 aa8.19□□□□□ -1.1
USB1-205ENST00000561743 LINC00469Q8N7U9 141 aa8.19□□□□□ -1.1
USB1-205ENST00000561743 SMIM1B2RUZ4 78 aa8.18□□□□□ -1.1
USB1-205ENST00000561743 F8VRH5 84 aa8.18□□□□□ -1.1
USB1-205ENST00000561743 H0Y9J4 135 aa8.18□□□□□ -1.1
USB1-205ENST00000561743 C10orf91Q5T1B1 145 aa8.18□□□□□ -1.1
USB1-205ENST00000561743 IGLV5-45A0A087WSX0 123 aa8.17□□□□□ -1.1
USB1-205ENST00000561743 TINCRA0A1B0GVN0 87 aa8.17□□□□□ -1.1
USB1-205ENST00000561743 NDUFA5Q16718 116 aa8.17□□□□□ -1.1
USB1-205ENST00000561743 COX19Q49B96 90 aa8.17□□□□□ -1.1
USB1-205ENST00000561743 MRPL18Q9H0U6 180 aaKnown RBP8.17□□□□□ -1.1
USB1-205ENST00000561743 XAGE1AQ9HD64 81 aa8.17□□□□□ -1.1
USB1-205ENST00000561743 LINC01549A6NIU2 74 aa8.16□□□□□ -1.1
USB1-205ENST00000561743 CXCL5P42830 114 aa8.16□□□□□ -1.1
USB1-205ENST00000561743 RHEBQ15382 184 aa8.16□□□□□ -1.1
USB1-205ENST00000561743 PRR26Q8N8Z3 221 aa8.16□□□□□ -1.1
USB1-205ENST00000561743 CST9LQ9H4G1 147 aa8.16□□□□□ -1.1
USB1-205ENST00000561743 CARHSP1Q9Y2V2 147 aaKnown RBP8.16□□□□□ -1.1
USB1-205ENST00000561743 FABP9Q0Z7S8 132 aa8.15□□□□□ -1.1
USB1-205ENST00000561743 PDZD11Q5EBL8 140 aa8.15□□□□□ -1.1
USB1-205ENST00000561743 RPS10P5Q9NQ39 176 aa8.15□□□□□ -1.1
USB1-205ENST00000561743 C22orf24Q9Y442 160 aa8.15□□□□□ -1.1
USB1-205ENST00000561743 KRTAP1-4P0C5Y4 121 aa8.14□□□□□ -1.11
USB1-205ENST00000561743 PMVKQ15126 192 aa8.14□□□□□ -1.11
USB1-205ENST00000561743 FA2HQ7L5A8 372 aa8.14□□□□□ -1.11
USB1-205ENST00000561743 COX7B2Q8TF08 81 aa8.14□□□□□ -1.11
USB1-205ENST00000561743 SMCO4Q9NRQ5 59 aa8.14□□□□□ -1.11
USB1-205ENST00000561743 RNF213Q63HN8 5207 aa8.14□□□□□ -1.11
USB1-205ENST00000561743 A0A096LNJ9 63 aa8.12□□□□□ -1.11
USB1-205ENST00000561743 SPINK8P0C7L1 97 aa8.12□□□□□ -1.11
USB1-205ENST00000561743 IGLV1-50A0A075B6I6 118 aa8.11□□□□□ -1.11
USB1-205ENST00000561743 MRPL55Q7Z7F7 128 aaKnown RBP8.11□□□□□ -1.11
USB1-205ENST00000561743 URB1-AS1Q96HZ7 61 aa8.11□□□□□ -1.11
USB1-205ENST00000561743 TP73-AS1Q9UF72 201 aa8.11□□□□□ -1.11
USB1-205ENST00000561743 NUPR1O60356 82 aa8.1□□□□□ -1.11
USB1-205ENST00000561743 ZNF861PO60384 105 aa8.1□□□□□ -1.11
USB1-205ENST00000561743 LBHQ53QV2 105 aaPredicted RBP8.1□□□□□ -1.11
USB1-205ENST00000561743 C18orf32Q8TCD1 76 aa8.1□□□□□ -1.11
USB1-205ENST00000561743 IGLC3P0DOY3 106 aa8.09□□□□□ -1.11
USB1-205ENST00000561743 TRAPPC1Q9Y5R8 145 aa8.09□□□□□ -1.11
USB1-205ENST00000561743 H3BRM9 83 aa8.08□□□□□ -1.12
USB1-205ENST00000561743 LINC00614P0C842 121 aa8.08□□□□□ -1.12
USB1-205ENST00000561743 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
USB1-205ENST00000561743 RAB5BP61020 215 aa8.07□□□□□ -1.12
USB1-205ENST00000561743 PMCHL1Q16048 86 aa8.07□□□□□ -1.12
USB1-205ENST00000561743 LINC00167Q96N53 147 aa8.07□□□□□ -1.12
USB1-205ENST00000561743 RPL37AP8A6NKH3 93 aa8.06□□□□□ -1.12
USB1-205ENST00000561743 ATP5LO75964 103 aa8.06□□□□□ -1.12
USB1-205ENST00000561743 HBDP02042 147 aa8.06□□□□□ -1.12
USB1-205ENST00000561743 ZNF22P17026 224 aaPredicted RBP8.06□□□□□ -1.12
USB1-205ENST00000561743 S100A1P23297 94 aa8.06□□□□□ -1.12
USB1-205ENST00000561743 NDUFA6P56556 154 aa8.06□□□□□ -1.12
USB1-205ENST00000561743 LPAP08519 4548 aa8.05□□□□□ -1.12
USB1-205ENST00000561743 IGLV5-37A0A075B6J1 123 aa8.05□□□□□ -1.12
USB1-205ENST00000561743 BCE1O60756 84 aa8.05□□□□□ -1.12
USB1-205ENST00000561743 APOC3P02656 99 aa8.05□□□□□ -1.12
USB1-205ENST00000561743 RPL13AP40429 203 aaKnown RBP8.05□□□□□ -1.12
USB1-205ENST00000561743 GAGE10A6NGK3 116 aa8.04□□□□□ -1.12
USB1-205ENST00000561743 RPL28P46779 137 aaKnown RBP8.04□□□□□ -1.12
USB1-205ENST00000561743 ATP6V1G1O75348 118 aa8.03□□□□□ -1.12
USB1-205ENST00000561743 SNAPINO95295 136 aa8.03□□□□□ -1.12
USB1-205ENST00000561743 PFN2P35080 140 aa8.03□□□□□ -1.12
USB1-205ENST00000561743 SVBPQ8N300 66 aa8.03□□□□□ -1.12
USB1-205ENST00000561743 NKAPP1Q8N9T2 125 aa8.03□□□□□ -1.12
USB1-205ENST00000561743 C11orf86A6NJI1 115 aa8.02□□□□□ -1.13
USB1-205ENST00000561743 SCO1O75880 301 aa8.01□□□□□ -1.13
USB1-205ENST00000561743 BAGE3Q86Y29 109 aa8.01□□□□□ -1.13
USB1-205ENST00000561743 KRTAP13-1Q8IUC0 172 aa8.01□□□□□ -1.13
USB1-205ENST00000561743 SLC7A5P1Q8MH63 180 aa8.01□□□□□ -1.13
USB1-205ENST00000561743 YPEL4Q96NS1 127 aa8.01□□□□□ -1.13
USB1-205ENST00000561743 ERG28Q9UKR5 140 aa8.01□□□□□ -1.13
USB1-205ENST00000561743 A0A087X002 238 aa8□□□□□ -1.13
USB1-205ENST00000561743 TMEM170BQ5T4T1 132 aa8□□□□□ -1.13
USB1-205ENST00000561743 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
USB1-205ENST00000561743 IGKV2-28A0A075B6P5 120 aa7.99□□□□□ -1.13
USB1-205ENST00000561743 IGKV2D-28P01615 120 aa7.99□□□□□ -1.13
USB1-205ENST00000561743 VPREB1P12018 145 aa7.99□□□□□ -1.13
USB1-205ENST00000561743 COX17Q14061 63 aa7.99□□□□□ -1.13
USB1-205ENST00000561743 ZNF625Q96I27 306 aaPredicted RBP7.99□□□□□ -1.13
USB1-205ENST00000561743 UBE2AP49459 152 aa7.97□□□□□ -1.13
USB1-205ENST00000561743 SFTA2Q6UW10 78 aa7.97□□□□□ -1.13
USB1-205ENST00000561743 Q8NDZ9 215 aa7.97□□□□□ -1.13
USB1-205ENST00000561743 CHCHD1Q96BP2 118 aaKnown RBP7.97□□□□□ -1.13
USB1-205ENST00000561743 CHTOPQ9Y3Y2 248 aaKnown RBP7.97□□□□□ -1.13
USB1-205ENST00000561743 CRYGAP11844 174 aa7.96□□□□□ -1.14
USB1-205ENST00000561743 TRAV12-1A0A0B4J245 112 aa7.95□□□□□ -1.14
USB1-205ENST00000561743 TMEM223A0PJW6 202 aa7.95□□□□□ -1.14
USB1-205ENST00000561743 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
USB1-205ENST00000561743 IFI27L1Q96BM0 104 aa7.95□□□□□ -1.14
USB1-205ENST00000561743 ANAPC11Q9NYG5 84 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms