RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 FSHBP01225 129 aa4.67□□□□□ -1.66
TSPAN3-209ENST00000560715 TLN1Q9Y490 2541 aaKnown RBP4.67□□□□□ -1.66
TSPAN3-209ENST00000560715 GCN1Q92616 2671 aaKnown RBP4.67□□□□□ -1.66
TSPAN3-209ENST00000560715 PKDREJQ9NTG1 2253 aa4.67□□□□□ -1.66
TSPAN3-209ENST00000560715 A0A087WYN8 130 aa4.67□□□□□ -1.66
TSPAN3-209ENST00000560715 CMC4P56277 68 aaPredicted RBP4.67□□□□□ -1.66
TSPAN3-209ENST00000560715 ITLN2Q8WWU7 325 aaPredicted RBP4.67□□□□□ -1.66
TSPAN3-209ENST00000560715 MOB4Q9Y3A3 225 aa4.67□□□□□ -1.66
TSPAN3-209ENST00000560715 ROS1P08922 2347 aa4.67□□□□□ -1.66
TSPAN3-209ENST00000560715 C15orf32Q32M92 178 aa4.67□□□□□ -1.66
TSPAN3-209ENST00000560715 FAM229BQ4G0N7 80 aa4.67□□□□□ -1.66
TSPAN3-209ENST00000560715 NPBQ8NG41 125 aa4.67□□□□□ -1.66
TSPAN3-209ENST00000560715 CELA1Q9UNI1 258 aa4.66□□□□□ -1.66
TSPAN3-209ENST00000560715 ARHGAP32A7KAX9 2087 aa4.66□□□□□ -1.66
TSPAN3-209ENST00000560715 H0YGX0 51 aa4.66□□□□□ -1.66
TSPAN3-209ENST00000560715 IGHV3-74A0A0B4J1X5 117 aa4.65□□□□□ -1.66
TSPAN3-209ENST00000560715 LY6HO94772 140 aa4.65□□□□□ -1.66
TSPAN3-209ENST00000560715 FAM74A4Q5TZK3 123 aa4.65□□□□□ -1.66
TSPAN3-209ENST00000560715 MIR7-3HGQ8N6C7 128 aa4.65□□□□□ -1.66
TSPAN3-209ENST00000560715 RELNP78509 3460 aa4.65□□□□□ -1.66
TSPAN3-209ENST00000560715 DPM3Q9P2X0 92 aa4.65□□□□□ -1.67
TSPAN3-209ENST00000560715 ODF3BA8MYP8 253 aa4.64□□□□□ -1.67
TSPAN3-209ENST00000560715 PRB3Q04118 309 aaPredicted RBP4.64□□□□□ -1.67
TSPAN3-209ENST00000560715 RNASE13Q5GAN3 156 aaKnown RBP4.64□□□□□ -1.67
TSPAN3-209ENST00000560715 SMIM29Q86T20 159 aa4.64□□□□□ -1.67
TSPAN3-209ENST00000560715 UBL5Q9BZL1 73 aa4.64□□□□□ -1.67
TSPAN3-209ENST00000560715 CDKN2A-AS1Q9UH64 79 aa4.64□□□□□ -1.67
TSPAN3-209ENST00000560715 MUC4Q99102 2169 aa4.64□□□□□ -1.67
TSPAN3-209ENST00000560715 CRPP02741 224 aa4.64□□□□□ -1.67
TSPAN3-209ENST00000560715 ANKHD1Q8IWZ3 2542 aaKnown RBP4.64□□□□□ -1.67
TSPAN3-209ENST00000560715 IGHV3-49A0A0A0MS15 119 aa4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 A0A1W2PPR1 153 aa4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 IGKV2-29A2NJV5 120 aaPredicted RBP4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 MIFP14174 115 aa4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 ESRGQ1W209 222 aa4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 ORMDL1Q9P0S3 153 aa4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 TRAV10A0A0B4J240 114 aa4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 JMJD7-PLA2G4BH0Y9G9 81 aa4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 LECT2O14960 151 aa4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 MINOS1Q5TGZ0 78 aa4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 ADM2Q7Z4H4 148 aa4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 MINOS1-NBL1R4GNA1 71 aa4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 ASH1LQ9NR48 2969 aaKnown RBP4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 TRBV7-4A0A0J9YYF1 115 aa4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 SMIM11BQ8TCY0 68 aa4.63□□□□□ -1.67
TSPAN3-209ENST00000560715 HELZ2Q9BYK8 2649 aaKnown RBP4.62□□□□□ -1.67
TSPAN3-209ENST00000560715 LRBAP50851 2863 aa4.62□□□□□ -1.67
TSPAN3-209ENST00000560715 KRTAP16-1A8MUX0 517 aa4.62□□□□□ -1.67
TSPAN3-209ENST00000560715 SETXQ7Z333 2677 aaKnown RBP4.62□□□□□ -1.67
TSPAN3-209ENST00000560715 IGLV8-61A0A075B6I0 122 aa4.62□□□□□ -1.67
TSPAN3-209ENST00000560715 J3QKU1 62 aa4.62□□□□□ -1.67
TSPAN3-209ENST00000560715 CYSRT1A8MQ03 144 aa4.61□□□□□ -1.67
TSPAN3-209ENST00000560715 C19orf84I3L1E1 186 aa4.61□□□□□ -1.67
TSPAN3-209ENST00000560715 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.61□□□□□ -1.67
TSPAN3-209ENST00000560715 HRNRQ86YZ3 2850 aaPredicted RBP4.61□□□□□ -1.67
TSPAN3-209ENST00000560715 TENM4Q6N022 2769 aa4.61□□□□□ -1.67
TSPAN3-209ENST00000560715 ABCA4P78363 2273 aa4.61□□□□□ -1.67
TSPAN3-209ENST00000560715 DCHS2Q6V1P9 2916 aa4.61□□□□□ -1.67
TSPAN3-209ENST00000560715 IGKV2-28A0A075B6P5 120 aa4.61□□□□□ -1.67
TSPAN3-209ENST00000560715 IGKV2D-28P01615 120 aa4.61□□□□□ -1.67
TSPAN3-209ENST00000560715 SLPIP03973 132 aa4.61□□□□□ -1.67
TSPAN3-209ENST00000560715 DEFB1P60022 68 aa4.61□□□□□ -1.67
TSPAN3-209ENST00000560715 CFAP46Q8IYW2 2715 aa4.61□□□□□ -1.67
TSPAN3-209ENST00000560715 KLK9Q2XQG4 91 aa4.6□□□□□ -1.67
TSPAN3-209ENST00000560715 Q8N6K4 173 aa4.6□□□□□ -1.67
TSPAN3-209ENST00000560715 KLK9Q9UKQ9 250 aa4.6□□□□□ -1.67
TSPAN3-209ENST00000560715 COL6A6A6NMZ7 2263 aa4.6□□□□□ -1.67
TSPAN3-209ENST00000560715 HIVEP3Q5T1R4 2406 aa4.6□□□□□ -1.67
TSPAN3-209ENST00000560715 SPTA1P02549 2419 aa4.6□□□□□ -1.67
TSPAN3-209ENST00000560715 ZNF462Q96JM2 2506 aa4.6□□□□□ -1.67
TSPAN3-209ENST00000560715 ERC2-IT1O76042 136 aa4.6□□□□□ -1.67
TSPAN3-209ENST00000560715 RPL36AP83881 106 aaKnown RBP4.6□□□□□ -1.67
TSPAN3-209ENST00000560715 PRR4Q16378 134 aa4.6□□□□□ -1.67
TSPAN3-209ENST00000560715 RPL36ALQ969Q0 106 aaKnown RBP4.6□□□□□ -1.67
TSPAN3-209ENST00000560715 CHCHD7Q9BUK0 85 aa4.6□□□□□ -1.67
TSPAN3-209ENST00000560715 LINC00167Q96N53 147 aa4.59□□□□□ -1.67
TSPAN3-209ENST00000560715 COX6A2Q02221 97 aa4.59□□□□□ -1.67
TSPAN3-209ENST00000560715 TMEM254Q8TBM7 123 aa4.59□□□□□ -1.67
TSPAN3-209ENST00000560715 DYNLRB2Q8TF09 96 aa4.59□□□□□ -1.67
TSPAN3-209ENST00000560715 TM2D3Q9BRN9 247 aa4.59□□□□□ -1.67
TSPAN3-209ENST00000560715 Q1T7F1 81 aa4.59□□□□□ -1.68
TSPAN3-209ENST00000560715 MYO18BQ8IUG5 2567 aa4.58□□□□□ -1.68
TSPAN3-209ENST00000560715 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.58□□□□□ -1.68
TSPAN3-209ENST00000560715 TMEM256-PLSCR3K7ERE1 68 aa4.58□□□□□ -1.68
TSPAN3-209ENST00000560715 Q6ZTC4 211 aa4.58□□□□□ -1.68
TSPAN3-209ENST00000560715 FLNBO75369 2602 aaKnown RBP4.58□□□□□ -1.68
TSPAN3-209ENST00000560715 FUSP35637 526 aaKnown RBP eCLIP4.57□□□□□ -1.683e-6■□□□□ 10.8
TSPAN3-209ENST00000560715 NOTCH2NLQ7Z3S9 236 aa4.57□□□□□ -1.68
TSPAN3-209ENST00000560715 Q8N3U1 123 aa4.57□□□□□ -1.68
TSPAN3-209ENST00000560715 CCL19Q99731 98 aa4.57□□□□□ -1.68
TSPAN3-209ENST00000560715 LINC00467Q9BRT7 94 aa4.57□□□□□ -1.68
TSPAN3-209ENST00000560715 NREPQ16612 68 aa4.57□□□□□ -1.68
TSPAN3-209ENST00000560715 Q6ZTI0 123 aa4.57□□□□□ -1.68
TSPAN3-209ENST00000560715 Q8N9W7 124 aa4.57□□□□□ -1.68
TSPAN3-209ENST00000560715 C8orf17Q9NRJ1 99 aa4.57□□□□□ -1.68
TSPAN3-209ENST00000560715 Q8N1X5 172 aa4.56□□□□□ -1.68
TSPAN3-209ENST00000560715 NBASA2RRP1 2371 aa4.56□□□□□ -1.68
TSPAN3-209ENST00000560715 HAMPP81172 84 aa4.56□□□□□ -1.68
TSPAN3-209ENST00000560715 SPTBN1Q01082 2364 aaKnown RBP4.56□□□□□ -1.68
TSPAN3-209ENST00000560715 TACC2O95359 2948 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms