RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 MALP21145 153 aa13.05□□□□□ -0.32
HMBOX1-215ENST00000560599 Q8N3U1 123 aa13.05□□□□□ -0.32
HMBOX1-215ENST00000560599 SMCPP49901 116 aaPredicted RBP13.05□□□□□ -0.32
HMBOX1-215ENST00000560599 ETDBQ3ZM63 59 aa13.05□□□□□ -0.32
HMBOX1-215ENST00000560599 VPS25Q9BRG1 176 aa13.05□□□□□ -0.32
HMBOX1-215ENST00000560599 PRR34Q9NV39 138 aa13.05□□□□□ -0.32
HMBOX1-215ENST00000560599 TRAV13-2A0A0B4J235 113 aa13.04□□□□□ -0.32
HMBOX1-215ENST00000560599 CKS1BP61024 79 aa13.04□□□□□ -0.32
HMBOX1-215ENST00000560599 FOXI1Q12951 378 aa13.04□□□□□ -0.32
HMBOX1-215ENST00000560599 SPATA25Q9BR10 227 aa13.04□□□□□ -0.32
HMBOX1-215ENST00000560599 CRPP02741 224 aa13.03□□□□□ -0.32
HMBOX1-215ENST00000560599 IGLV10-54A0A075B6I4 117 aa13.02□□□□□ -0.33
HMBOX1-215ENST00000560599 LINC01620Q4KN68 170 aa13.02□□□□□ -0.33
HMBOX1-215ENST00000560599 C11orf45Q8TAV5 145 aa13.02□□□□□ -0.33
HMBOX1-215ENST00000560599 SND1-IT1Q9HBX3 110 aa13.02□□□□□ -0.33
HMBOX1-215ENST00000560599 GAGE12HA6NDE8 117 aa13.01□□□□□ -0.33
HMBOX1-215ENST00000560599 C9JAW5 83 aa13.01□□□□□ -0.33
HMBOX1-215ENST00000560599 KLK12Q9UKR0 248 aa13.01□□□□□ -0.33
HMBOX1-215ENST00000560599 FLNBO75369 2602 aaKnown RBP13□□□□□ -0.33
HMBOX1-215ENST00000560599 TRAV8-4A0A0B4J246 113 aa13□□□□□ -0.33
HMBOX1-215ENST00000560599 SLC25A20O43772 301 aa13□□□□□ -0.33
HMBOX1-215ENST00000560599 KIAA0087Q14695 138 aa13□□□□□ -0.33
HMBOX1-215ENST00000560599 DEFB131BA0A096LNP1 70 aa12.99□□□□□ -0.33
HMBOX1-215ENST00000560599 LST1O00453 97 aa12.99□□□□□ -0.33
HMBOX1-215ENST00000560599 PFN2P35080 140 aa12.99□□□□□ -0.33
HMBOX1-215ENST00000560599 CCL18P55774 89 aa12.99□□□□□ -0.33
HMBOX1-215ENST00000560599 NANOS2P60321 138 aaKnown RBP12.99□□□□□ -0.33
HMBOX1-215ENST00000560599 COX17Q14061 63 aa12.99□□□□□ -0.33
HMBOX1-215ENST00000560599 TEN1Q86WV5 123 aa12.99□□□□□ -0.33
HMBOX1-215ENST00000560599 KLK5Q9Y337 293 aaPredicted RBP12.99□□□□□ -0.33
HMBOX1-215ENST00000560599 LINC01600Q96MT4 127 aa12.98□□□□□ -0.33
HMBOX1-215ENST00000560599 TRBV10-2A0A0K0K1G8 114 aa12.97□□□□□ -0.33
HMBOX1-215ENST00000560599 SPAG11BQ08648 103 aa12.97□□□□□ -0.33
HMBOX1-215ENST00000560599 PPDPFLQ8WWR9 84 aa12.97□□□□□ -0.33
HMBOX1-215ENST00000560599 ENHOQ6UWT2 76 aa12.96□□□□□ -0.33
HMBOX1-215ENST00000560599 MUC7Q8TAX7 377 aa12.96□□□□□ -0.33
HMBOX1-215ENST00000560599 DNAH3Q8TD57 4116 aa12.96□□□□□ -0.33
HMBOX1-215ENST00000560599 NBEAL2Q6ZNJ1 2754 aa12.96□□□□□ -0.34
HMBOX1-215ENST00000560599 TRRAPQ9Y4A5 3859 aa12.96□□□□□ -0.34
HMBOX1-215ENST00000560599 C2orf82Q6UX34 121 aa12.96□□□□□ -0.34
HMBOX1-215ENST00000560599 TM2D3Q9BRN9 247 aa12.96□□□□□ -0.34
HMBOX1-215ENST00000560599 CMYA5Q8N3K9 4069 aa12.95□□□□□ -0.34
HMBOX1-215ENST00000560599 TRAV10A0A0B4J240 114 aa12.95□□□□□ -0.34
HMBOX1-215ENST00000560599 H3BT86 120 aa12.95□□□□□ -0.34
HMBOX1-215ENST00000560599 WFDC10BQ8IUB3 73 aa12.95□□□□□ -0.34
HMBOX1-215ENST00000560599 ANKRD29Q8N6D5 301 aa12.95□□□□□ -0.34
HMBOX1-215ENST00000560599 UBE2WQ96B02 151 aa12.95□□□□□ -0.34
HMBOX1-215ENST00000560599 IGKV2-28A0A075B6P5 120 aa12.94□□□□□ -0.34
HMBOX1-215ENST00000560599 K7EIL1 84 aa12.94□□□□□ -0.34
HMBOX1-215ENST00000560599 IGKV2D-28P01615 120 aa12.94□□□□□ -0.34
HMBOX1-215ENST00000560599 CLEC2BQ92478 149 aa12.94□□□□□ -0.34
HMBOX1-215ENST00000560599 RPL28P46779 137 aaKnown RBP12.92□□□□□ -0.34
HMBOX1-215ENST00000560599 LINC00337Q8N6G1 96 aa12.92□□□□□ -0.34
HMBOX1-215ENST00000560599 C15orf53Q8NAA6 179 aa12.92□□□□□ -0.34
HMBOX1-215ENST00000560599 FBN1P35555 2871 aaKnown RBP12.92□□□□□ -0.34
HMBOX1-215ENST00000560599 ESRGQ1W209 222 aa12.91□□□□□ -0.34
HMBOX1-215ENST00000560599 LINC01556Q5JQF7 62 aa12.9□□□□□ -0.34
HMBOX1-215ENST00000560599 NDUFC2O95298 119 aa12.89□□□□□ -0.35
HMBOX1-215ENST00000560599 CARD19Q96LW7 228 aa12.89□□□□□ -0.35
HMBOX1-215ENST00000560599 TRACP01848 142 aa12.88□□□□□ -0.35
HMBOX1-215ENST00000560599 PRB2P02812 416 aaPredicted RBP12.88□□□□□ -0.35
HMBOX1-215ENST00000560599 GVQW2A0A096LPI5 108 aaPredicted RBP12.87□□□□□ -0.35
HMBOX1-215ENST00000560599 DEFB121Q5J5C9 76 aa12.87□□□□□ -0.35
HMBOX1-215ENST00000560599 BAHCC1Q9P281 2608 aa12.86□□□□□ -0.35
HMBOX1-215ENST00000560599 SMIM11BQ8TCY0 68 aa12.85□□□□□ -0.35
HMBOX1-215ENST00000560599 UNQ6190/PRO20217Q6UXQ8 127 aa12.84□□□□□ -0.35
HMBOX1-215ENST00000560599 OR13C6PQ8NH95 151 aa12.84□□□□□ -0.35
HMBOX1-215ENST00000560599 NTN5Q8WTR8 489 aaPredicted RBP12.84□□□□□ -0.35
HMBOX1-215ENST00000560599 STAB1Q9NY15 2570 aa12.83□□□□□ -0.35
HMBOX1-215ENST00000560599 MAST4O15021 2626 aa12.83□□□□□ -0.36
HMBOX1-215ENST00000560599 H0YGX0 51 aa12.83□□□□□ -0.36
HMBOX1-215ENST00000560599 KRTAP26-1Q6PEX3 210 aa12.83□□□□□ -0.36
HMBOX1-215ENST00000560599 C6orf223Q8N319 242 aa12.83□□□□□ -0.36
HMBOX1-215ENST00000560599 MRAPQ8TCY5 172 aa12.83□□□□□ -0.36
HMBOX1-215ENST00000560599 C1orf43Q9BWL3 253 aa12.83□□□□□ -0.36
HMBOX1-215ENST00000560599 DNAH10OSP0CZ25 163 aa12.82□□□□□ -0.36
HMBOX1-215ENST00000560599 C10orf25Q5T742 122 aa12.81□□□□□ -0.36
HMBOX1-215ENST00000560599 F8WDY8 70 aa12.8□□□□□ -0.36
HMBOX1-215ENST00000560599 C9orf116Q5BN46 136 aaPredicted RBP12.8□□□□□ -0.36
HMBOX1-215ENST00000560599 ZNF561-AS1K7EIQ3 104 aa12.79□□□□□ -0.36
HMBOX1-215ENST00000560599 C2orf48Q96LS8 159 aa12.79□□□□□ -0.36
HMBOX1-215ENST00000560599 ANK2Q01484 3957 aa12.78□□□□□ -0.36
HMBOX1-215ENST00000560599 LINC00526Q96FQ7 95 aa12.77□□□□□ -0.37
HMBOX1-215ENST00000560599 FAM218AQ96MZ4 157 aa12.77□□□□□ -0.37
HMBOX1-215ENST00000560599 CAMK2N2Q96S95 79 aa12.77□□□□□ -0.37
HMBOX1-215ENST00000560599 TMEM126AQ9H061 195 aa12.77□□□□□ -0.37
HMBOX1-215ENST00000560599 C6orf48Q9UBA6 75 aa12.77□□□□□ -0.37
HMBOX1-215ENST00000560599 IGKV2D-24A0A075B6R9 120 aa12.76□□□□□ -0.37
HMBOX1-215ENST00000560599 DNAL4O96015 105 aa12.76□□□□□ -0.37
HMBOX1-215ENST00000560599 C15orf56Q8N910 161 aa12.76□□□□□ -0.37
HMBOX1-215ENST00000560599 HIGD2BQ4VC39 106 aa12.75□□□□□ -0.37
HMBOX1-215ENST00000560599 SIGMAR1Q99720 223 aa12.74□□□□□ -0.37
HMBOX1-215ENST00000560599 LINC00588Q9Y4M8 146 aa12.74□□□□□ -0.37
HMBOX1-215ENST00000560599 NCR3O14931 201 aa12.73□□□□□ -0.37
HMBOX1-215ENST00000560599 TEX49A0A1B0GTD5 131 aa12.72□□□□□ -0.37
HMBOX1-215ENST00000560599 A0A1B0GX51 115 aa12.72□□□□□ -0.37
HMBOX1-215ENST00000560599 RMI2Q96E14 147 aa12.72□□□□□ -0.37
HMBOX1-215ENST00000560599 BAALC-AS2P0C853 105 aa12.71□□□□□ -0.37
HMBOX1-215ENST00000560599 S100A7L2Q5SY68 101 aa12.71□□□□□ -0.37
HMBOX1-215ENST00000560599 UPK3BQ9BT76 320 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms