RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CXCL5P42830 114 aa11.83□□□□□ -0.52
CLPX-203ENST00000558958 CKS1BP61024 79 aa11.83□□□□□ -0.52
CLPX-203ENST00000558958 ZNF625Q96I27 306 aaPredicted RBP11.83□□□□□ -0.52
CLPX-203ENST00000558958 NDUFA1O15239 70 aa11.83□□□□□ -0.52
CLPX-203ENST00000558958 F8WDY8 70 aa11.82□□□□□ -0.52
CLPX-203ENST00000558958 COX8AP10176 69 aa11.82□□□□□ -0.52
CLPX-203ENST00000558958 TNP2Q05952 138 aa11.82□□□□□ -0.52
CLPX-203ENST00000558958 C14orf144Q96I85 54 aa11.82□□□□□ -0.52
CLPX-203ENST00000558958 MYMXA0A1B0GTQ4 84 aa11.81□□□□□ -0.52
CLPX-203ENST00000558958 ZNF815PA8K554 130 aa11.81□□□□□ -0.52
CLPX-203ENST00000558958 SLPIP03973 132 aa11.81□□□□□ -0.52
CLPX-203ENST00000558958 SFTA2Q6UW10 78 aa11.81□□□□□ -0.52
CLPX-203ENST00000558958 UNQ6190/PRO20217Q6UXQ8 127 aa11.81□□□□□ -0.52
CLPX-203ENST00000558958 CAMK2N2Q96S95 79 aa11.81□□□□□ -0.52
CLPX-203ENST00000558958 HECTD4Q9Y4D8 3996 aa11.81□□□□□ -0.52
CLPX-203ENST00000558958 C10orf25Q5T742 122 aa11.8□□□□□ -0.52
CLPX-203ENST00000558958 Q8N814 137 aa11.8□□□□□ -0.52
CLPX-203ENST00000558958 FAT2Q9NYQ8 4349 aa11.8□□□□□ -0.52
CLPX-203ENST00000558958 BOD1L2Q8IYS8 172 aa11.79□□□□□ -0.52
CLPX-203ENST00000558958 RYR3Q15413 4870 aa11.79□□□□□ -0.52
CLPX-203ENST00000558958 HERV-K104P63124 156 aa11.78□□□□□ -0.52
CLPX-203ENST00000558958 SYCNQ0VAF6 134 aa11.78□□□□□ -0.52
CLPX-203ENST00000558958 Q6ZRU5 148 aa11.78□□□□□ -0.52
CLPX-203ENST00000558958 DLEU1O43261 78 aa11.77□□□□□ -0.52
CLPX-203ENST00000558958 CNBPP62633 177 aaKnown RBP11.77□□□□□ -0.52
CLPX-203ENST00000558958 TP73-AS1Q9UF72 201 aa11.77□□□□□ -0.52
CLPX-203ENST00000558958 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.76□□□□□ -0.53
CLPX-203ENST00000558958 SLC25A34Q6PIV7 304 aa11.76□□□□□ -0.53
CLPX-203ENST00000558958 C6orf48Q9UBA6 75 aa11.76□□□□□ -0.53
CLPX-203ENST00000558958 DNAH11Q96DT5 4516 aa11.76□□□□□ -0.53
CLPX-203ENST00000558958 A0A0J9YXY3 114 aa11.76□□□□□ -0.53
CLPX-203ENST00000558958 TRBV30A0A0K0K1B3 111 aa11.76□□□□□ -0.53
CLPX-203ENST00000558958 EREGO14944 169 aa11.76□□□□□ -0.53
CLPX-203ENST00000558958 CARD19Q96LW7 228 aa11.76□□□□□ -0.53
CLPX-203ENST00000558958 PRO1933Q9H354 126 aa11.76□□□□□ -0.53
CLPX-203ENST00000558958 LINC00336Q6ZUF6 198 aa11.75□□□□□ -0.53
CLPX-203ENST00000558958 RNF151Q2KHN1 245 aa11.74□□□□□ -0.53
CLPX-203ENST00000558958 C9orf116Q5BN46 136 aaPredicted RBP11.74□□□□□ -0.53
CLPX-203ENST00000558958 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.73□□□□□ -0.53
CLPX-203ENST00000558958 SCGB1D4Q6XE38 83 aa11.73□□□□□ -0.53
CLPX-203ENST00000558958 UQCR10Q9UDW1 63 aa11.72□□□□□ -0.53
CLPX-203ENST00000558958 ERG28Q9UKR5 140 aa11.72□□□□□ -0.53
CLPX-203ENST00000558958 MEIG1Q5JSS6 88 aa11.71□□□□□ -0.53
CLPX-203ENST00000558958 LINC00587B1AMM8 73 aa11.7□□□□□ -0.54
CLPX-203ENST00000558958 TIMM17BO60830 172 aa11.7□□□□□ -0.54
CLPX-203ENST00000558958 SMIM13P0DJ93 91 aa11.7□□□□□ -0.54
CLPX-203ENST00000558958 PFN2P35080 140 aa11.7□□□□□ -0.54
CLPX-203ENST00000558958 COX17Q14061 63 aa11.7□□□□□ -0.54
CLPX-203ENST00000558958 LITAFQ99732 161 aa11.7□□□□□ -0.54
CLPX-203ENST00000558958 MIEN1Q9BRT3 115 aa11.7□□□□□ -0.54
CLPX-203ENST00000558958 PKD1P98161 4303 aa11.69□□□□□ -0.54
CLPX-203ENST00000558958 TSTD3H0UI37 97 aa11.69□□□□□ -0.54
CLPX-203ENST00000558958 CIRBPQ14011 172 aaKnown RBP11.69□□□□□ -0.54
CLPX-203ENST00000558958 C2orf91Q6ZV80 131 aa11.69□□□□□ -0.54
CLPX-203ENST00000558958 C9orf163Q8N9P6 203 aa11.69□□□□□ -0.54
CLPX-203ENST00000558958 A0A0U1RRA0 63 aa11.68□□□□□ -0.54
CLPX-203ENST00000558958 LINC00158P58513 81 aa11.68□□□□□ -0.54
CLPX-203ENST00000558958 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
CLPX-203ENST00000558958 FUSP35637 526 aaKnown RBP eCLIP11.67□□□□□ -0.542e-7■■■■□ 21.6
CLPX-203ENST00000558958 HIGD1BQ9P298 99 aa11.67□□□□□ -0.54
CLPX-203ENST00000558958 TMEM238C9JI98 176 aa11.66□□□□□ -0.54
CLPX-203ENST00000558958 NDUFC2-KCTD14E9PQ53 114 aa11.66□□□□□ -0.54
CLPX-203ENST00000558958 TLX1NBP0CAT3 122 aa11.66□□□□□ -0.54
CLPX-203ENST00000558958 KRTAP10-2P60368 255 aa11.66□□□□□ -0.54
CLPX-203ENST00000558958 IGLV5-52A0A0A0MRZ9 124 aa11.65□□□□□ -0.54
CLPX-203ENST00000558958 DNAH5Q8TE73 4624 aa11.65□□□□□ -0.54
CLPX-203ENST00000558958 Q6ZRP5 223 aa11.64□□□□□ -0.55
CLPX-203ENST00000558958 MIR7-3HGQ8N6C7 128 aa11.64□□□□□ -0.55
CLPX-203ENST00000558958 DAND5Q8N907 189 aa11.64□□□□□ -0.55
CLPX-203ENST00000558958 PGPEP1Q9NXJ5 209 aa11.64□□□□□ -0.55
CLPX-203ENST00000558958 LOC107984640A0A0U1RRK4 108 aa11.63□□□□□ -0.55
CLPX-203ENST00000558958 LINC01620Q4KN68 170 aa11.63□□□□□ -0.55
CLPX-203ENST00000558958 SPANXDQ9BXN6 97 aa11.63□□□□□ -0.55
CLPX-203ENST00000558958 SPANXB1Q9NS25 103 aaPredicted RBP11.63□□□□□ -0.55
CLPX-203ENST00000558958 SPANXCQ9NY87 97 aa11.63□□□□□ -0.55
CLPX-203ENST00000558958 HNRNPA3P51991 378 aaKnown RBP11.63□□□□□ -0.55
CLPX-203ENST00000558958 RPL18AQ02543 176 aaKnown RBP11.62□□□□□ -0.55
CLPX-203ENST00000558958 SDIM1Q6ZPB5 146 aa11.62□□□□□ -0.55
CLPX-203ENST00000558958 A0A1B0GVY2 172 aa11.61□□□□□ -0.55
CLPX-203ENST00000558958 SRSF9Q13242 221 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLPX-203ENST00000558958 Q6ZVH6 145 aa11.61□□□□□ -0.55
CLPX-203ENST00000558958 GAGE2EQ4V326 116 aa11.6□□□□□ -0.55
CLPX-203ENST00000558958 SND1-IT1Q9HBX3 110 aa11.6□□□□□ -0.55
CLPX-203ENST00000558958 GAGE2DQ9UEU5 116 aa11.6□□□□□ -0.55
CLPX-203ENST00000558958 PKIGQ9Y2B9 76 aa11.6□□□□□ -0.55
CLPX-203ENST00000558958 HIST1H4GQ99525 98 aa11.59□□□□□ -0.55
CLPX-203ENST00000558958 C16orf90A8MZG2 172 aa11.58□□□□□ -0.56
CLPX-203ENST00000558958 EIF4EBP3O60516 100 aaPredicted RBP11.58□□□□□ -0.56
CLPX-203ENST00000558958 PTTG1IPP53801 180 aa11.58□□□□□ -0.56
CLPX-203ENST00000558958 GAGE2BQ13066 116 aa11.58□□□□□ -0.56
CLPX-203ENST00000558958 LINC00308Q8TCZ7 52 aa11.58□□□□□ -0.56
CLPX-203ENST00000558958 XAGE1AQ9HD64 81 aa11.58□□□□□ -0.56
CLPX-203ENST00000558958 A0A096LNI7 61 aa11.57□□□□□ -0.56
CLPX-203ENST00000558958 LOC107984156A0A0G2JMH3 177 aa11.57□□□□□ -0.56
CLPX-203ENST00000558958 IFITM1P13164 125 aa11.57□□□□□ -0.56
CLPX-203ENST00000558958 GCSHP23434 173 aa11.57□□□□□ -0.56
CLPX-203ENST00000558958 DDTP30046 118 aa11.57□□□□□ -0.56
CLPX-203ENST00000558958 NPC2P61916 151 aa11.57□□□□□ -0.56
CLPX-203ENST00000558958 SOSTDC1Q6X4U4 206 aa11.57□□□□□ -0.56
CLPX-203ENST00000558958 ARL17AQ8IVW1 177 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms