RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 LINC00588Q9Y4M8 146 aa9.33□□□□□ -0.92
TPM1-215ENST00000558868 NUPR2A6NF83 97 aa9.32□□□□□ -0.92
TPM1-215ENST00000558868 LITAFQ99732 161 aa9.32□□□□□ -0.92
TPM1-215ENST00000558868 KLK5Q9Y337 293 aaPredicted RBP9.32□□□□□ -0.92
TPM1-215ENST00000558868 COX11Q9Y6N1 276 aa9.32□□□□□ -0.92
TPM1-215ENST00000558868 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.31□□□□□ -0.92
TPM1-215ENST00000558868 A0A1B0GWB2 263 aa9.31□□□□□ -0.92
TPM1-215ENST00000558868 K7EP13 123 aa9.3□□□□□ -0.92
TPM1-215ENST00000558868 CKS1BP61024 79 aa9.3□□□□□ -0.92
TPM1-215ENST00000558868 MUSTN1Q8IVN3 82 aa9.3□□□□□ -0.92
TPM1-215ENST00000558868 C9orf118A6NHY6 69 aa9.29□□□□□ -0.92
TPM1-215ENST00000558868 IBA57-AS1B1ANH7 110 aa9.29□□□□□ -0.92
TPM1-215ENST00000558868 ADAMTSL4-AS1Q5T5F5 129 aa9.29□□□□□ -0.92
TPM1-215ENST00000558868 C1orf43Q9BWL3 253 aa9.29□□□□□ -0.92
TPM1-215ENST00000558868 PPDPFQ9H3Y8 114 aa9.29□□□□□ -0.92
TPM1-215ENST00000558868 PCLOQ9Y6V0 5065 aa9.29□□□□□ -0.92
TPM1-215ENST00000558868 RYR2Q92736 4967 aa9.29□□□□□ -0.92
TPM1-215ENST00000558868 RMI2Q96E14 147 aa9.28□□□□□ -0.92
TPM1-215ENST00000558868 APLNQ9ULZ1 77 aa9.28□□□□□ -0.92
TPM1-215ENST00000558868 DNAH9Q9NYC9 4486 aa9.27□□□□□ -0.92
TPM1-215ENST00000558868 RAB37Q96AX2 223 aa9.27□□□□□ -0.93
TPM1-215ENST00000558868 A4D1N5 150 aa9.26□□□□□ -0.93
TPM1-215ENST00000558868 K7ERJ3 54 aa9.26□□□□□ -0.93
TPM1-215ENST00000558868 SPAG11BQ08648 103 aa9.26□□□□□ -0.93
TPM1-215ENST00000558868 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
TPM1-215ENST00000558868 UBE2DNLQ8IWF7 75 aa9.26□□□□□ -0.93
TPM1-215ENST00000558868 RYR1P21817 5038 aa9.25□□□□□ -0.93
TPM1-215ENST00000558868 A0A0B4J2C4 111 aa9.25□□□□□ -0.93
TPM1-215ENST00000558868 LINC00158P58513 81 aa9.25□□□□□ -0.93
TPM1-215ENST00000558868 LINC00308Q8TCZ7 52 aa9.25□□□□□ -0.93
TPM1-215ENST00000558868 ERG28Q9UKR5 140 aa9.25□□□□□ -0.93
TPM1-215ENST00000558868 IGKV2D-24A0A075B6R9 120 aa9.24□□□□□ -0.93
TPM1-215ENST00000558868 CFC1BP0CG36 223 aa9.24□□□□□ -0.93
TPM1-215ENST00000558868 CFC1P0CG37 223 aa9.24□□□□□ -0.93
TPM1-215ENST00000558868 COX17Q14061 63 aa9.24□□□□□ -0.93
TPM1-215ENST00000558868 VAMP3Q15836 100 aa9.24□□□□□ -0.93
TPM1-215ENST00000558868 KRTAP26-1Q6PEX3 210 aa9.24□□□□□ -0.93
TPM1-215ENST00000558868 PRO1854Q9UHT4 67 aa9.24□□□□□ -0.93
TPM1-215ENST00000558868 A0A0U1RRA0 63 aa9.23□□□□□ -0.93
TPM1-215ENST00000558868 F8WDY8 70 aa9.23□□□□□ -0.93
TPM1-215ENST00000558868 H3BUT2 72 aa9.23□□□□□ -0.93
TPM1-215ENST00000558868 MUC7Q8TAX7 377 aa9.23□□□□□ -0.93
TPM1-215ENST00000558868 FABP2P12104 132 aa9.22□□□□□ -0.93
TPM1-215ENST00000558868 NPC2P61916 151 aa9.22□□□□□ -0.93
TPM1-215ENST00000558868 MIR7-3HGQ8N6C7 128 aa9.22□□□□□ -0.93
TPM1-215ENST00000558868 DAND5Q8N907 189 aa9.22□□□□□ -0.93
TPM1-215ENST00000558868 A0A1W2PPM0 123 aa9.21□□□□□ -0.94
TPM1-215ENST00000558868 ZNF561-AS1K7EIQ3 104 aa9.21□□□□□ -0.94
TPM1-215ENST00000558868 C2orf82Q6UX34 121 aa9.21□□□□□ -0.94
TPM1-215ENST00000558868 Q9HAA7 133 aa9.21□□□□□ -0.94
TPM1-215ENST00000558868 PGPEP1Q9NXJ5 209 aa9.21□□□□□ -0.94
TPM1-215ENST00000558868 GVQW2A0A096LPI5 108 aaPredicted RBP9.2□□□□□ -0.94
TPM1-215ENST00000558868 PFN2P35080 140 aa9.2□□□□□ -0.94
TPM1-215ENST00000558868 LYRM7Q5U5X0 104 aa9.2□□□□□ -0.94
TPM1-215ENST00000558868 GTF2H5Q6ZYL4 71 aa9.2□□□□□ -0.94
TPM1-215ENST00000558868 NTN5Q8WTR8 489 aaPredicted RBP9.2□□□□□ -0.94
TPM1-215ENST00000558868 C2orf48Q96LS8 159 aa9.2□□□□□ -0.94
TPM1-215ENST00000558868 STAB2Q8WWQ8 2551 aa9.18□□□□□ -0.94
TPM1-215ENST00000558868 TRBV30A0A0K0K1B3 111 aa9.18□□□□□ -0.94
TPM1-215ENST00000558868 UBE2V1Q13404 147 aa9.18□□□□□ -0.94
TPM1-215ENST00000558868 COL7A1Q02388 2944 aa9.18□□□□□ -0.94
TPM1-215ENST00000558868 GAGE10A6NGK3 116 aa9.17□□□□□ -0.94
TPM1-215ENST00000558868 TSPAN13O95857 204 aa9.17□□□□□ -0.94
TPM1-215ENST00000558868 TTC32Q5I0X7 151 aa9.17□□□□□ -0.94
TPM1-215ENST00000558868 UNQ6190/PRO20217Q6UXQ8 127 aa9.17□□□□□ -0.94
TPM1-215ENST00000558868 SOSTDC1Q6X4U4 206 aa9.17□□□□□ -0.94
TPM1-215ENST00000558868 C6orf223Q8N319 242 aa9.17□□□□□ -0.94
TPM1-215ENST00000558868 C15orf56Q8N910 161 aa9.17□□□□□ -0.94
TPM1-215ENST00000558868 CAMK2N2Q96S95 79 aa9.17□□□□□ -0.94
TPM1-215ENST00000558868 NAA38Q9BRA0 125 aaKnown RBP9.17□□□□□ -0.94
TPM1-215ENST00000558868 DYNC2H1Q8NCM8 4307 aaKnown RBP9.17□□□□□ -0.94
TPM1-215ENST00000558868 LOC107984156A0A0G2JMH3 177 aa9.16□□□□□ -0.94
TPM1-215ENST00000558868 ARL17AQ8IVW1 177 aa9.16□□□□□ -0.94
TPM1-215ENST00000558868 SND1-IT1Q9HBX3 110 aa9.16□□□□□ -0.94
TPM1-215ENST00000558868 SPCS1Q9Y6A9 102 aa9.16□□□□□ -0.94
TPM1-215ENST00000558868 HERC2O95714 4834 aa9.15□□□□□ -0.94
TPM1-215ENST00000558868 TRAV13-2A0A0B4J235 113 aa9.15□□□□□ -0.94
TPM1-215ENST00000558868 K7EP34 96 aa9.15□□□□□ -0.94
TPM1-215ENST00000558868 Q1RN00 199 aa9.15□□□□□ -0.94
TPM1-215ENST00000558868 HIGD2BQ4VC39 106 aa9.15□□□□□ -0.94
TPM1-215ENST00000558868 SACSQ9NZJ4 4579 aa9.15□□□□□ -0.95
TPM1-215ENST00000558868 EIF4EBP3O60516 100 aaPredicted RBP9.14□□□□□ -0.95
TPM1-215ENST00000558868 PSMB2P49721 201 aa9.14□□□□□ -0.95
TPM1-215ENST00000558868 C10orf25Q5T742 122 aa9.14□□□□□ -0.95
TPM1-215ENST00000558868 RPL13AP40429 203 aaKnown RBP9.13□□□□□ -0.95
TPM1-215ENST00000558868 LINC00526Q96FQ7 95 aa9.13□□□□□ -0.95
TPM1-215ENST00000558868 C6orf48Q9UBA6 75 aa9.13□□□□□ -0.95
TPM1-215ENST00000558868 H7C2G1 150 aa9.12□□□□□ -0.95
TPM1-215ENST00000558868 TRBV20-1A0A075B6N2 111 aa9.11□□□□□ -0.95
TPM1-215ENST00000558868 USP17L23D6RBM5 183 aa9.11□□□□□ -0.95
TPM1-215ENST00000558868 NDUFC2O95298 119 aa9.11□□□□□ -0.95
TPM1-215ENST00000558868 COX6CP09669 75 aa9.11□□□□□ -0.95
TPM1-215ENST00000558868 SCGB1C2P0DMR2 95 aa9.11□□□□□ -0.95
TPM1-215ENST00000558868 SYCNQ0VAF6 134 aa9.11□□□□□ -0.95
TPM1-215ENST00000558868 RNF151Q2KHN1 245 aa9.11□□□□□ -0.95
TPM1-215ENST00000558868 C9orf116Q5BN46 136 aaPredicted RBP9.11□□□□□ -0.95
TPM1-215ENST00000558868 NBDYA0A0U1RRE5 68 aa9.1□□□□□ -0.95
TPM1-215ENST00000558868 PSCAO43653 123 aa9.09□□□□□ -0.95
TPM1-215ENST00000558868 Q6ZRU5 148 aa9.09□□□□□ -0.95
TPM1-215ENST00000558868 C14orf177Q52M58 125 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms