RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 MEIG1Q5JSS6 88 aa13.63□□□□□ -0.23
SNRPA1-205ENST00000558036 IBA57-AS1B1ANH7 110 aa13.63□□□□□ -0.23
SNRPA1-205ENST00000558036 K7ERJ3 54 aa13.63□□□□□ -0.23
SNRPA1-205ENST00000558036 NHP2Q9NX24 153 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-205ENST00000558036 C6orf223Q8N319 242 aa13.62□□□□□ -0.23
SNRPA1-205ENST00000558036 DNAH10Q8IVF4 4471 aa13.61□□□□□ -0.23
SNRPA1-205ENST00000558036 SMIM13P0DJ93 91 aa13.61□□□□□ -0.23
SNRPA1-205ENST00000558036 HERV-K104P63124 156 aa13.61□□□□□ -0.23
SNRPA1-205ENST00000558036 KRTAP1-5Q9BYS1 174 aa13.61□□□□□ -0.23
SNRPA1-205ENST00000558036 MUSTN1Q8IVN3 82 aa13.61□□□□□ -0.23
SNRPA1-205ENST00000558036 A0A1B0GV90 55 aa13.6□□□□□ -0.23
SNRPA1-205ENST00000558036 EIF4EBP3O60516 100 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-205ENST00000558036 CKS1BP61024 79 aa13.6□□□□□ -0.23
SNRPA1-205ENST00000558036 A6NDN8 102 aa13.6□□□□□ -0.23
SNRPA1-205ENST00000558036 APOMO95445 188 aa13.6□□□□□ -0.23
SNRPA1-205ENST00000558036 SPAG11BQ08648 103 aa13.6□□□□□ -0.23
SNRPA1-205ENST00000558036 CFAP161Q6P656 301 aa13.6□□□□□ -0.23
SNRPA1-205ENST00000558036 CIRBPQ14011 172 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-205ENST00000558036 TIMM17BO60830 172 aa13.58□□□□□ -0.23
SNRPA1-205ENST00000558036 RAB37Q96AX2 223 aa13.58□□□□□ -0.23
SNRPA1-205ENST00000558036 SPANXDQ9BXN6 97 aa13.58□□□□□ -0.23
SNRPA1-205ENST00000558036 SPANXCQ9NY87 97 aa13.58□□□□□ -0.23
SNRPA1-205ENST00000558036 HIGD2BQ4VC39 106 aa13.58□□□□□ -0.24
SNRPA1-205ENST00000558036 TAX1BP3O14907 124 aa13.57□□□□□ -0.24
SNRPA1-205ENST00000558036 PFN2P35080 140 aa13.57□□□□□ -0.24
SNRPA1-205ENST00000558036 VPS13DQ5THJ4 4388 aa13.57□□□□□ -0.24
SNRPA1-205ENST00000558036 CASC10Q5T4H9 136 aa13.57□□□□□ -0.24
SNRPA1-205ENST00000558036 C10orf25Q5T742 122 aa13.56□□□□□ -0.24
SNRPA1-205ENST00000558036 C15orf56Q8N910 161 aa13.56□□□□□ -0.24
SNRPA1-205ENST00000558036 MUC7Q8TAX7 377 aa13.55□□□□□ -0.24
SNRPA1-205ENST00000558036 A4D1N5 150 aa13.55□□□□□ -0.24
SNRPA1-205ENST00000558036 LINC00158P58513 81 aa13.55□□□□□ -0.24
SNRPA1-205ENST00000558036 C9orf116Q5BN46 136 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-205ENST00000558036 UNQ6190/PRO20217Q6UXQ8 127 aa13.54□□□□□ -0.24
SNRPA1-205ENST00000558036 MIR7-3HGQ8N6C7 128 aa13.54□□□□□ -0.24
SNRPA1-205ENST00000558036 NAA38Q9BRA0 125 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-205ENST00000558036 ERG28Q9UKR5 140 aa13.54□□□□□ -0.24
SNRPA1-205ENST00000558036 SOSTDC1Q6X4U4 206 aa13.53□□□□□ -0.24
SNRPA1-205ENST00000558036 TMEM238LA0A1B0GVL6 79 aa13.52□□□□□ -0.24
SNRPA1-205ENST00000558036 A6NJY4 79 aa13.52□□□□□ -0.24
SNRPA1-205ENST00000558036 SFTA2Q6UW10 78 aa13.52□□□□□ -0.24
SNRPA1-205ENST00000558036 LINC00308Q8TCZ7 52 aa13.52□□□□□ -0.24
SNRPA1-205ENST00000558036 CXCL5P42830 114 aa13.52□□□□□ -0.25
SNRPA1-205ENST00000558036 RPL24P83731 157 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-205ENST00000558036 ZNF561-AS1K7EIQ3 104 aa13.51□□□□□ -0.25
SNRPA1-205ENST00000558036 CFC1BP0CG36 223 aa13.51□□□□□ -0.25
SNRPA1-205ENST00000558036 CFC1P0CG37 223 aa13.51□□□□□ -0.25
SNRPA1-205ENST00000558036 NTN5Q8WTR8 489 aaPredicted RBP13.51□□□□□ -0.25
SNRPA1-205ENST00000558036 A0A1B0GWB2 263 aa13.49□□□□□ -0.25
SNRPA1-205ENST00000558036 COX11Q9Y6N1 276 aa13.49□□□□□ -0.25
SNRPA1-205ENST00000558036 LECT2O14960 151 aa13.49□□□□□ -0.25
SNRPA1-205ENST00000558036 RMI2Q96E14 147 aa13.48□□□□□ -0.25
SNRPA1-205ENST00000558036 IFITM1P13164 125 aa13.48□□□□□ -0.25
SNRPA1-205ENST00000558036 WWC2-AS2Q96NR7 200 aa13.48□□□□□ -0.25
SNRPA1-205ENST00000558036 CAMK2N2Q96S95 79 aa13.46□□□□□ -0.25
SNRPA1-205ENST00000558036 KMT2AQ03164 3969 aa13.46□□□□□ -0.26
SNRPA1-205ENST00000558036 NBDYA0A0U1RRE5 68 aa13.46□□□□□ -0.26
SNRPA1-205ENST00000558036 USP17L23D6RBM5 183 aa13.46□□□□□ -0.26
SNRPA1-205ENST00000558036 H3BUT2 72 aa13.46□□□□□ -0.26
SNRPA1-205ENST00000558036 C6orf48Q9UBA6 75 aa13.46□□□□□ -0.26
SNRPA1-205ENST00000558036 GVQW2A0A096LPI5 108 aaPredicted RBP13.45□□□□□ -0.26
SNRPA1-205ENST00000558036 M0R2N4 97 aa13.45□□□□□ -0.26
SNRPA1-205ENST00000558036 C9orf118A6NHY6 69 aa13.44□□□□□ -0.26
SNRPA1-205ENST00000558036 Q6ZRU5 148 aa13.44□□□□□ -0.26
SNRPA1-205ENST00000558036 PGPEP1Q9NXJ5 209 aa13.43□□□□□ -0.26
SNRPA1-205ENST00000558036 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.42□□□□□ -0.26
SNRPA1-205ENST00000558036 COX17Q14061 63 aa13.42□□□□□ -0.26
SNRPA1-205ENST00000558036 WFDC2Q14508 124 aa13.42□□□□□ -0.26
SNRPA1-205ENST00000558036 H7C2G1 150 aa13.41□□□□□ -0.26
SNRPA1-205ENST00000558036 PRO1854Q9UHT4 67 aa13.41□□□□□ -0.26
SNRPA1-205ENST00000558036 PSCAO43653 123 aa13.4□□□□□ -0.26
SNRPA1-205ENST00000558036 TTC32Q5I0X7 151 aa13.4□□□□□ -0.26
SNRPA1-205ENST00000558036 C2orf48Q96LS8 159 aa13.4□□□□□ -0.26
SNRPA1-205ENST00000558036 A0A0B4J2C4 111 aa13.4□□□□□ -0.26
SNRPA1-205ENST00000558036 COPS9Q8WXC6 57 aa13.4□□□□□ -0.26
SNRPA1-205ENST00000558036 TSPAN13O95857 204 aa13.39□□□□□ -0.27
SNRPA1-205ENST00000558036 SND1-IT1Q9HBX3 110 aa13.39□□□□□ -0.27
SNRPA1-205ENST00000558036 SLPIP03973 132 aa13.39□□□□□ -0.27
SNRPA1-205ENST00000558036 DNAH2Q9P225 4427 aa13.38□□□□□ -0.27
SNRPA1-205ENST00000558036 SYCNQ0VAF6 134 aa13.37□□□□□ -0.27
SNRPA1-205ENST00000558036 TRBV30A0A0K0K1B3 111 aa13.37□□□□□ -0.27
SNRPA1-205ENST00000558036 VAMP3Q15836 100 aa13.37□□□□□ -0.27
SNRPA1-205ENST00000558036 A0A1W2PPM0 123 aa13.36□□□□□ -0.27
SNRPA1-205ENST00000558036 LY6G6CO95867 125 aa13.36□□□□□ -0.27
SNRPA1-205ENST00000558036 XAGE1AQ9HD64 81 aa13.34□□□□□ -0.27
SNRPA1-205ENST00000558036 IGKV2-28A0A075B6P5 120 aa13.34□□□□□ -0.27
SNRPA1-205ENST00000558036 IGKV2D-28P01615 120 aa13.34□□□□□ -0.27
SNRPA1-205ENST00000558036 RPL13AP40429 203 aaKnown RBP13.33□□□□□ -0.28
SNRPA1-205ENST00000558036 PRR3P79522 188 aaKnown RBP13.33□□□□□ -0.28
SNRPA1-205ENST00000558036 Q8NDZ9 215 aa13.33□□□□□ -0.28
SNRPA1-205ENST00000558036 CARD19Q96LW7 228 aa13.33□□□□□ -0.28
SNRPA1-205ENST00000558036 PPDPFQ9H3Y8 114 aa13.33□□□□□ -0.28
SNRPA1-205ENST00000558036 Q1RN00 199 aa13.33□□□□□ -0.28
SNRPA1-205ENST00000558036 Q6ZRN7 208 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-205ENST00000558036 FABP2P12104 132 aa13.31□□□□□ -0.28
SNRPA1-205ENST00000558036 LINC00337Q8N6G1 96 aa13.31□□□□□ -0.28
SNRPA1-205ENST00000558036 LOC107984156A0A0G2JMH3 177 aa13.3□□□□□ -0.28
SNRPA1-205ENST00000558036 GAGE2EQ4V326 116 aa13.3□□□□□ -0.28
SNRPA1-205ENST00000558036 ARL17AQ8IVW1 177 aa13.3□□□□□ -0.28
SNRPA1-205ENST00000558036 GAGE2DQ9UEU5 116 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms