RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-210ENST00000557206 COX17Q14061 63 aa1.52□□□□□ -2.17
HIF1A-210ENST00000557206 BAGE3Q86Y29 109 aa1.52□□□□□ -2.17
HIF1A-210ENST00000557206 BAGE2Q86Y30 109 aa1.52□□□□□ -2.17
HIF1A-210ENST00000557206 HILPDAQ9Y5L2 63 aa1.52□□□□□ -2.17
HIF1A-210ENST00000557206 FCGBPQ9Y6R7 5405 aaPredicted RBP1.51□□□□□ -2.17
HIF1A-210ENST00000557206 UTRNP46939 3433 aa1.51□□□□□ -2.17
HIF1A-210ENST00000557206 IGKV3D-7A0A0C4DH55 119 aa1.51□□□□□ -2.17
HIF1A-210ENST00000557206 IGKV3OR2-268A0A0C4DH90 116 aa1.51□□□□□ -2.17
HIF1A-210ENST00000557206 A0A0D9SFI3 127 aa1.51□□□□□ -2.17
HIF1A-210ENST00000557206 M0R135 149 aa1.51□□□□□ -2.17
HIF1A-210ENST00000557206 INE1O15225 51 aa1.51□□□□□ -2.17
HIF1A-210ENST00000557206 IL9P15248 144 aa1.51□□□□□ -2.17
HIF1A-210ENST00000557206 UBE2D4Q9Y2X8 147 aa1.51□□□□□ -2.17
HIF1A-210ENST00000557206 SNURFQ9Y675 71 aa1.51□□□□□ -2.17
HIF1A-210ENST00000557206 LINC01558Q9Y6Z2 57 aa1.51□□□□□ -2.17
HIF1A-210ENST00000557206 LOC285556D6RIA3 1793 aa1.5□□□□□ -2.17
HIF1A-210ENST00000557206 M0R2N4 97 aa1.5□□□□□ -2.17
HIF1A-210ENST00000557206 C3orf79P0CE67 100 aa1.5□□□□□ -2.17
HIF1A-210ENST00000557206 FXYD3Q14802 87 aa1.5□□□□□ -2.17
HIF1A-210ENST00000557206 SMIM4Q8WVI0 70 aa1.5□□□□□ -2.17
HIF1A-210ENST00000557206 MYH9P35579 1960 aaKnown RBP1.5□□□□□ -2.17
HIF1A-210ENST00000557206 CASP8AP2Q9UKL3 1982 aa1.5□□□□□ -2.17
HIF1A-210ENST00000557206 PLXNB2O15031 1838 aa1.5□□□□□ -2.17
HIF1A-210ENST00000557206 PTPRFP10586 1907 aa1.49□□□□□ -2.17
HIF1A-210ENST00000557206 ANAPC1Q9H1A4 1944 aa1.49□□□□□ -2.17
HIF1A-210ENST00000557206 LOC110117498A0A087WWA1 95 aa1.49□□□□□ -2.17
HIF1A-210ENST00000557206 NBDYA0A0U1RRE5 68 aa1.49□□□□□ -2.17
HIF1A-210ENST00000557206 A0A1B0GUT8 65 aa1.49□□□□□ -2.17
HIF1A-210ENST00000557206 M0R3E3 92 aa1.49□□□□□ -2.17
HIF1A-210ENST00000557206 FXYD4P59646 89 aa1.49□□□□□ -2.17
HIF1A-210ENST00000557206 ATXN8Q156A1 80 aa1.49□□□□□ -2.17
HIF1A-210ENST00000557206 C5orf56Q8N8D9 126 aa1.49□□□□□ -2.17
HIF1A-210ENST00000557206 FDCSPQ8NFU4 85 aa1.49□□□□□ -2.17
HIF1A-210ENST00000557206 LINC00846Q9NV44 126 aa1.49□□□□□ -2.17
HIF1A-210ENST00000557206 BAZ2BQ9UIF8 2168 aaKnown RBP1.49□□□□□ -2.17
HIF1A-210ENST00000557206 PTPRSQ13332 1948 aa1.48□□□□□ -2.17
HIF1A-210ENST00000557206 MYLKQ15746 1914 aa1.48□□□□□ -2.17
HIF1A-210ENST00000557206 PLXNA1Q9UIW2 1896 aa1.48□□□□□ -2.17
HIF1A-210ENST00000557206 KIAA1549LQ6ZVL6 1849 aa1.48□□□□□ -2.17
HIF1A-210ENST00000557206 ZNF236Q9UL36 1845 aa1.48□□□□□ -2.17
HIF1A-210ENST00000557206 A0A087WVE0 104 aa1.48□□□□□ -2.17
HIF1A-210ENST00000557206 C10orf142B7Z368 130 aa1.48□□□□□ -2.17
HIF1A-210ENST00000557206 NDUFB1O75438 58 aa1.48□□□□□ -2.17
HIF1A-210ENST00000557206 WFDC6Q9BQY6 131 aa1.48□□□□□ -2.17
HIF1A-210ENST00000557206 A0A0G2JMZ2 1700 aa1.48□□□□□ -2.17
HIF1A-210ENST00000557206 GREB1Q4ZG55 1949 aa1.48□□□□□ -2.17
HIF1A-210ENST00000557206 COL4A5P29400 1685 aa1.48□□□□□ -2.17
HIF1A-210ENST00000557206 PARP14Q460N5 1801 aa1.47□□□□□ -2.17
HIF1A-210ENST00000557206 CITO14578 2027 aa1.47□□□□□ -2.17
HIF1A-210ENST00000557206 MALRD1Q5VYJ5 2156 aa1.47□□□□□ -2.17
HIF1A-210ENST00000557206 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-210ENST00000557206 A0A087WTM6 91 aa1.47□□□□□ -2.17
HIF1A-210ENST00000557206 H0Y9P7 68 aa1.47□□□□□ -2.17
HIF1A-210ENST00000557206 LYNX1P0DP58 116 aa1.47□□□□□ -2.17
HIF1A-210ENST00000557206 CAV3P56539 151 aa1.47□□□□□ -2.17
HIF1A-210ENST00000557206 GDF5OSQ5U4N7 250 aa1.47□□□□□ -2.17
HIF1A-210ENST00000557206 Q6ZQY7 126 aa1.47□□□□□ -2.17
HIF1A-210ENST00000557206 PROK2Q9HC23 129 aa1.47□□□□□ -2.17
HIF1A-210ENST00000557206 SSC5DA1L4H1 1573 aa1.47□□□□□ -2.17
HIF1A-210ENST00000557206 TCHHQ07283 1943 aa1.46□□□□□ -2.18
HIF1A-210ENST00000557206 CEP290O15078 2479 aa1.46□□□□□ -2.18
HIF1A-210ENST00000557206 FXYD6-FXYD2A0A087WZ82 144 aa1.46□□□□□ -2.18
HIF1A-210ENST00000557206 TRAV1-2A0A0B4J238 106 aa1.46□□□□□ -2.18
HIF1A-210ENST00000557206 ACYP2P14621 99 aa1.46□□□□□ -2.18
HIF1A-210ENST00000557206 ZNF137PP52743 207 aa1.46□□□□□ -2.18
HIF1A-210ENST00000557206 DEFB107AQ8IZN7 70 aa1.46□□□□□ -2.18
HIF1A-210ENST00000557206 LINC00208Q96KT6 92 aa1.46□□□□□ -2.18
HIF1A-210ENST00000557206 FAM103A1Q9BTL3 118 aaKnown RBP1.46□□□□□ -2.18
HIF1A-210ENST00000557206 FXYD6Q9H0Q3 95 aa1.46□□□□□ -2.18
HIF1A-210ENST00000557206 TANC2Q9HCD6 1990 aa1.46□□□□□ -2.18
HIF1A-210ENST00000557206 MUC22E2RYF6 1773 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-210ENST00000557206 ANK1P16157 1881 aa1.46□□□□□ -2.18
HIF1A-210ENST00000557206 CHD3Q12873 2000 aaKnown RBP1.45□□□□□ -2.18
HIF1A-210ENST00000557206 MUC4Q99102 2169 aa1.45□□□□□ -2.18
HIF1A-210ENST00000557206 FREM3P0C091 2139 aa1.45□□□□□ -2.18
HIF1A-210ENST00000557206 TRGV1A0A0A0MS02 117 aa1.45□□□□□ -2.18
HIF1A-210ENST00000557206 TRBV7-4A0A0J9YYF1 115 aa1.45□□□□□ -2.18
HIF1A-210ENST00000557206 SNRPGP15A8MWD9 76 aa1.45□□□□□ -2.18
HIF1A-210ENST00000557206 LRRC37A2A6NM11 1700 aa1.45□□□□□ -2.18
HIF1A-210ENST00000557206 CEP350Q5VT06 3117 aa1.45□□□□□ -2.18
HIF1A-210ENST00000557206 CPAMD8Q8IZJ3 1885 aa1.45□□□□□ -2.18
HIF1A-210ENST00000557206 COL4A6Q14031 1691 aa1.45□□□□□ -2.18
HIF1A-210ENST00000557206 PCNTO95613 3336 aa1.45□□□□□ -2.18
HIF1A-210ENST00000557206 KIAA0100Q14667 2235 aaKnown RBP1.44□□□□□ -2.18
HIF1A-210ENST00000557206 PDE4DIPQ5VU43 2346 aa1.44□□□□□ -2.18
HIF1A-210ENST00000557206 CCDC88CQ9P219 2028 aa1.44□□□□□ -2.18
HIF1A-210ENST00000557206 TANC1Q9C0D5 1861 aa1.44□□□□□ -2.18
HIF1A-210ENST00000557206 TMEM263Q8WUH6 116 aaKnown RBP1.44□□□□□ -2.18
HIF1A-210ENST00000557206 ZFC3H1O60293 1989 aaKnown RBP1.43□□□□□ -2.18
HIF1A-210ENST00000557206 PRRC2BQ5JSZ5 2229 aaKnown RBP1.43□□□□□ -2.18
HIF1A-210ENST00000557206 HCRTO43612 131 aa1.43□□□□□ -2.18
HIF1A-210ENST00000557206 SPRR4Q96PI1 79 aa1.43□□□□□ -2.18
HIF1A-210ENST00000557206 CCL19Q99731 98 aa1.43□□□□□ -2.18
HIF1A-210ENST00000557206 Q9Y3F1 56 aa1.43□□□□□ -2.18
HIF1A-210ENST00000557206 PLXNA4Q9HCM2 1894 aa1.43□□□□□ -2.18
HIF1A-210ENST00000557206 SIP14410 1827 aa1.43□□□□□ -2.18
HIF1A-210ENST00000557206 SCN3AQ9NY46 2000 aa1.42□□□□□ -2.18
HIF1A-210ENST00000557206 RP1L1Q8IWN7 2480 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-210ENST00000557206 HMGA1P17096 107 aaKnown RBP1.42□□□□□ -2.18
HIF1A-210ENST00000557206 S100A3P33764 101 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms