RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 C2orf82Q6UX34 121 aa11.28□□□□□ -0.6
TUBB3-211ENST00000556536 Q6ZRU5 148 aa11.28□□□□□ -0.6
TUBB3-211ENST00000556536 ATOH7Q8N100 152 aa11.28□□□□□ -0.6
TUBB3-211ENST00000556536 CAMK2N2Q96S95 79 aa11.28□□□□□ -0.6
TUBB3-211ENST00000556536 UNQ6190/PRO20217Q6UXQ8 127 aa11.27□□□□□ -0.61
TUBB3-211ENST00000556536 CDPF1Q6NVV7 123 aa11.26□□□□□ -0.61
TUBB3-211ENST00000556536 STPG4Q8N801 248 aa11.26□□□□□ -0.61
TUBB3-211ENST00000556536 CARD19Q96LW7 228 aa11.26□□□□□ -0.61
TUBB3-211ENST00000556536 KRTAP4-5Q9BYR2 181 aa11.25□□□□□ -0.61
TUBB3-211ENST00000556536 LRP1BQ9NZR2 4599 aa11.24□□□□□ -0.61
TUBB3-211ENST00000556536 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.24□□□□□ -0.61
TUBB3-211ENST00000556536 F8WDY8 70 aa11.24□□□□□ -0.61
TUBB3-211ENST00000556536 NDUFA1O15239 70 aa11.24□□□□□ -0.61
TUBB3-211ENST00000556536 SCGB1D1O95968 90 aa11.24□□□□□ -0.61
TUBB3-211ENST00000556536 CKS1BP61024 79 aa11.24□□□□□ -0.61
TUBB3-211ENST00000556536 HERVK_113P61574 105 aa11.24□□□□□ -0.61
TUBB3-211ENST00000556536 C9orf163Q8N9P6 203 aa11.24□□□□□ -0.61
TUBB3-211ENST00000556536 TSPEAR-AS2P59090 65 aa11.23□□□□□ -0.61
TUBB3-211ENST00000556536 C6orf48Q9UBA6 75 aa11.23□□□□□ -0.61
TUBB3-211ENST00000556536 DNAH8Q96JB1 4490 aa11.23□□□□□ -0.61
TUBB3-211ENST00000556536 C16orf90A8MZG2 172 aa11.22□□□□□ -0.61
TUBB3-211ENST00000556536 LEPROTO15243 131 aa11.22□□□□□ -0.61
TUBB3-211ENST00000556536 GCSHP23434 173 aa11.22□□□□□ -0.61
TUBB3-211ENST00000556536 E9PLD3 99 aa11.21□□□□□ -0.61
TUBB3-211ENST00000556536 CXCL5P42830 114 aa11.21□□□□□ -0.61
TUBB3-211ENST00000556536 AKR1D1P51857 326 aa11.21□□□□□ -0.61
TUBB3-211ENST00000556536 KRTAP10-1P60331 282 aa11.21□□□□□ -0.61
TUBB3-211ENST00000556536 MAJINQ3KP22 176 aa11.21□□□□□ -0.61
TUBB3-211ENST00000556536 ANKRD39Q53RE8 183 aa11.2□□□□□ -0.62
TUBB3-211ENST00000556536 C9orf116Q5BN46 136 aaPredicted RBP11.2□□□□□ -0.62
TUBB3-211ENST00000556536 PLEKHB2Q96CS7 222 aa11.2□□□□□ -0.62
TUBB3-211ENST00000556536 ZNF625Q96I27 306 aaPredicted RBP11.2□□□□□ -0.62
TUBB3-211ENST00000556536 IGKV2D-26A0A0A0MRZ7 120 aa11.19□□□□□ -0.62
TUBB3-211ENST00000556536 J3QQQ9 107 aa11.19□□□□□ -0.62
TUBB3-211ENST00000556536 JOSD1Q15040 202 aaPredicted RBP11.19□□□□□ -0.62
TUBB3-211ENST00000556536 RNF151Q2KHN1 245 aa11.19□□□□□ -0.62
TUBB3-211ENST00000556536 SDIM1Q6ZPB5 146 aa11.19□□□□□ -0.62
TUBB3-211ENST00000556536 HSPG2P98160 4391 aa11.19□□□□□ -0.62
TUBB3-211ENST00000556536 TRBV30A0A0K0K1B3 111 aa11.18□□□□□ -0.62
TUBB3-211ENST00000556536 NDUFA12Q9UI09 145 aa11.17□□□□□ -0.62
TUBB3-211ENST00000556536 LGALS3P17931 250 aaKnown RBP11.16□□□□□ -0.62
TUBB3-211ENST00000556536 PYY3Q5JQD4 70 aa11.15□□□□□ -0.62
TUBB3-211ENST00000556536 LOC107984640A0A0U1RRK4 108 aa11.14□□□□□ -0.63
TUBB3-211ENST00000556536 TTTY13Q9BZ97 58 aa11.14□□□□□ -0.63
TUBB3-211ENST00000556536 FAM30AQ9NZY2 134 aa11.14□□□□□ -0.63
TUBB3-211ENST00000556536 A0A096LNI7 61 aa11.13□□□□□ -0.63
TUBB3-211ENST00000556536 MYMXA0A1B0GTQ4 84 aa11.13□□□□□ -0.63
TUBB3-211ENST00000556536 PANO1I0J062 215 aa11.13□□□□□ -0.63
TUBB3-211ENST00000556536 CHTF8P0CG12 524 aa11.13□□□□□ -0.63
TUBB3-211ENST00000556536 NMUP48645 174 aa11.13□□□□□ -0.63
TUBB3-211ENST00000556536 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
TUBB3-211ENST00000556536 SFTA2Q6UW10 78 aa11.13□□□□□ -0.63
TUBB3-211ENST00000556536 Q6ZRP5 223 aa11.13□□□□□ -0.63
TUBB3-211ENST00000556536 APOBP04114 4563 aaKnown RBP11.13□□□□□ -0.63
TUBB3-211ENST00000556536 HERC1Q15751 4861 aa11.12□□□□□ -0.63
TUBB3-211ENST00000556536 HSBP1L1C9JCN9 74 aa11.12□□□□□ -0.63
TUBB3-211ENST00000556536 TLX1NBP0CAT3 122 aa11.12□□□□□ -0.63
TUBB3-211ENST00000556536 GAGE2BQ13066 116 aa11.12□□□□□ -0.63
TUBB3-211ENST00000556536 ERG28Q9UKR5 140 aa11.12□□□□□ -0.63
TUBB3-211ENST00000556536 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.12□□□□□ -0.63
TUBB3-211ENST00000556536 IGKV2-24A0A0C4DH68 120 aa11.11□□□□□ -0.63
TUBB3-211ENST00000556536 LOC105371267A0A1B0GV96 52 aa11.11□□□□□ -0.63
TUBB3-211ENST00000556536 NDUFC2-KCTD14E9PQ53 114 aa11.11□□□□□ -0.63
TUBB3-211ENST00000556536 PFN2P35080 140 aa11.11□□□□□ -0.63
TUBB3-211ENST00000556536 HERV-K104P63124 156 aa11.11□□□□□ -0.63
TUBB3-211ENST00000556536 CDK2AP2O75956 126 aa11.1□□□□□ -0.63
TUBB3-211ENST00000556536 PTTG1IPP53801 180 aa11.1□□□□□ -0.63
TUBB3-211ENST00000556536 Q6ZSA8 131 aa11.1□□□□□ -0.63
TUBB3-211ENST00000556536 PCP2Q8IVA1 136 aa11.1□□□□□ -0.63
TUBB3-211ENST00000556536 GAGE2EQ4V326 116 aa11.09□□□□□ -0.63
TUBB3-211ENST00000556536 GAGE2DQ9UEU5 116 aa11.09□□□□□ -0.63
TUBB3-211ENST00000556536 PKIGQ9Y2B9 76 aa11.09□□□□□ -0.63
TUBB3-211ENST00000556536 A0A0U1RRA0 63 aa11.08□□□□□ -0.64
TUBB3-211ENST00000556536 ZNF815PA8K554 130 aa11.08□□□□□ -0.64
TUBB3-211ENST00000556536 SMIM13P0DJ93 91 aa11.08□□□□□ -0.64
TUBB3-211ENST00000556536 A0A0J9YXY3 114 aa11.07□□□□□ -0.64
TUBB3-211ENST00000556536 HAMPP81172 84 aa11.07□□□□□ -0.64
TUBB3-211ENST00000556536 CIRBPQ14011 172 aaKnown RBP11.07□□□□□ -0.64
TUBB3-211ENST00000556536 MEIG1Q5JSS6 88 aa11.07□□□□□ -0.64
TUBB3-211ENST00000556536 SPACA4Q8TDM5 124 aa11.07□□□□□ -0.64
TUBB3-211ENST00000556536 VAMP8Q9BV40 100 aa11.07□□□□□ -0.64
TUBB3-211ENST00000556536 PAM16Q9Y3D7 125 aa11.07□□□□□ -0.64
TUBB3-211ENST00000556536 LINC00158P58513 81 aa11.06□□□□□ -0.64
TUBB3-211ENST00000556536 COX17Q14061 63 aa11.06□□□□□ -0.64
TUBB3-211ENST00000556536 SPATA45Q537H7 98 aa11.05□□□□□ -0.64
TUBB3-211ENST00000556536 C9orf129Q5T035 196 aaKnown RBP11.05□□□□□ -0.64
TUBB3-211ENST00000556536 XAGE1AQ9HD64 81 aa11.05□□□□□ -0.64
TUBB3-211ENST00000556536 LINC00474Q9P2X8 69 aa11.04□□□□□ -0.64
TUBB3-211ENST00000556536 XGP55808 180 aa11.03□□□□□ -0.64
TUBB3-211ENST00000556536 Q8N1X5 172 aa11.03□□□□□ -0.64
TUBB3-211ENST00000556536 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
TUBB3-211ENST00000556536 TP73-AS1Q9UF72 201 aa11.03□□□□□ -0.64
TUBB3-211ENST00000556536 A0A087WYN8 130 aa11.02□□□□□ -0.65
TUBB3-211ENST00000556536 LINC00587B1AMM8 73 aa11.02□□□□□ -0.65
TUBB3-211ENST00000556536 ADAMTSL4-AS1Q5T5F5 129 aa11.02□□□□□ -0.65
TUBB3-211ENST00000556536 SCXQ7RTU7 201 aa11.02□□□□□ -0.65
TUBB3-211ENST00000556536 MIR7-3HGQ8N6C7 128 aa11.02□□□□□ -0.65
TUBB3-211ENST00000556536 DAND5Q8N907 189 aa11.02□□□□□ -0.65
TUBB3-211ENST00000556536 CIRBP-AS1Q8TBR5 109 aa11.02□□□□□ -0.65
TUBB3-211ENST00000556536 SND1-IT1Q9HBX3 110 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms