RNA–Protein interactions for RNA: ENST00000555227.1

LINC01578-205, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 5

Gene LINC01578, Length 1,078 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-205ENST00000555227 PLNP26678 52 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 GCHFRP30047 84 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 CKS2P33552 79 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 RPS27P42677 84 aaKnown RBP0.71□□□□□ -2.3
LINC01578-205ENST00000555227 EDDM3BP56851 147 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 HSD52Q0P140 79 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 Q56UQ5 140 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 LINC01590Q5TEZ4 76 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 C10orf113Q5VZT2 155 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 ZNF818PQ6ZRF7 136 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 KRTAP19-3Q7Z4W3 81 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 TTC9CQ8N5M4 171 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.71□□□□□ -2.3
LINC01578-205ENST00000555227 C18orf32Q8TCD1 76 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 TSKUQ8WUA8 353 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 WFDC6Q9BQY6 131 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 NXT2Q9NPJ8 142 aaKnown RBP0.71□□□□□ -2.3
LINC01578-205ENST00000555227 SPCS1Q9Y6A9 102 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 A0A0G2JMZ2 1700 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 LRRC37A2A6NM11 1700 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 LRRC37AA6NMS7 1700 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 URB1O60287 2271 aaKnown RBP0.71□□□□□ -2.3
LINC01578-205ENST00000555227 TACC2O95359 2948 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 NBEAQ8NFP9 2946 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 HTTP42858 3142 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 CELSR3Q9NYQ7 3312 aa0.71□□□□□ -2.3
LINC01578-205ENST00000555227 USF3Q68DE3 2245 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 NRXN2Q9P2S2 1712 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 ATG2AQ2TAZ0 1938 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 LAMA3Q16787 3333 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.7□□□□□ -2.3
LINC01578-205ENST00000555227 TRBV27A0A0K0K1C4 114 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 SMIM27A0A1W2PRY6 76 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 TMEM189A5PLL7 270 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 HIGD1CA8MV81 97 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 SYS1-DBNDD2H3BUS1 97 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 K7EMI3 77 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 M0R3E3 92 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 DPM2O94777 84 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 IGKCP01834 107 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 HBDP02042 147 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 SCTP09683 121 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 NBEAP1P0C6P0 100 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 IGLC1P0CG04 106 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 COX8AP10176 69 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 RPL7P18124 248 aaKnown RBP0.7□□□□□ -2.3
LINC01578-205ENST00000555227 PDE6GP18545 87 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 EVI2AP22794 236 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 CBLN1P23435 193 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 ASIPP42127 132 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 RPL37AP61513 92 aaKnown RBP0.7□□□□□ -2.3
LINC01578-205ENST00000555227 QRFPP83859 136 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 FXYD3Q14802 87 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 PIGYQ3MUY2 71 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 NMSQ5H8A3 153 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 MEIG1Q5JSS6 88 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 C10orf128Q5T292 105 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 BVES-AS1Q5T3Y7 98 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 LINC01545Q5VT33 79 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 Q6ZS92 163 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 PPDPFLQ8WWR9 84 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 IFI27L1Q96BM0 104 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 MGST2Q99735 147 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 NABP2Q9BQ15 211 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 LINC00470Q9BZP3 86 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 DYNLRB1Q9NP97 96 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 HIGD1BQ9P298 99 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 JPT1Q9UK76 154 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 ERG28Q9UKR5 140 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 HIGD1AQ9Y241 93 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 DNAJC13O75165 2243 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 F5P12259 2224 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 CDH23Q9H251 3354 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 FAM186AA6NE01 2351 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 UNC80Q8N2C7 3258 aa0.7□□□□□ -2.3
LINC01578-205ENST00000555227 DNAH14Q0VDD8 3507 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 TPRP12270 2363 aaKnown RBP0.69□□□□□ -2.3
LINC01578-205ENST00000555227 BRCA2P51587 3418 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 KIAA1549LQ6ZVL6 1849 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 VCANP13611 3396 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 TRAV2A0A0B4J234 112 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 IGHV1-24A0A0C4DH33 117 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 MYMXA0A1B0GTQ4 84 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 DEFB108AA8MXU0 73 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 IQCF6A8MYZ5 107 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 K7EP34 96 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 M0R2P5 195 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 OR2H2O95918 312 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 RBP4P02753 201 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 ZNF137PP52743 207 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 FOXA3P55318 350 aaPredicted RBP0.69□□□□□ -2.3
LINC01578-205ENST00000555227 UBE2L3P68036 154 aaKnown RBP0.69□□□□□ -2.3
LINC01578-205ENST00000555227 WFDC2Q14508 124 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 ATXN8Q156A1 80 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 DEFB133Q30KQ1 61 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 DEFB110Q30KQ9 67 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 TDRG1Q3Y452 100 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 ETDBQ3ZM63 59 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 S100A7L2Q5SY68 101 aa0.69□□□□□ -2.3
LINC01578-205ENST00000555227 SPANXN1Q5VSR9 72 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms