RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 DNAH2Q9P225 4427 aa7.17□□□□□ -1.26
SHMT2-218ENST00000555213 IGHV3-64A0A075B6Q5 118 aa7.17□□□□□ -1.26
SHMT2-218ENST00000555213 TSTD3H0UI37 97 aa7.17□□□□□ -1.26
SHMT2-218ENST00000555213 J3QQQ9 107 aa7.17□□□□□ -1.26
SHMT2-218ENST00000555213 DDTP30046 118 aa7.17□□□□□ -1.26
SHMT2-218ENST00000555213 SLC25A34Q6PIV7 304 aa7.17□□□□□ -1.26
SHMT2-218ENST00000555213 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.16□□□□□ -1.26
SHMT2-218ENST00000555213 LINC00587B1AMM8 73 aa7.16□□□□□ -1.26
SHMT2-218ENST00000555213 APOMO95445 188 aa7.16□□□□□ -1.26
SHMT2-218ENST00000555213 KRTAP10-2P60368 255 aa7.16□□□□□ -1.26
SHMT2-218ENST00000555213 LINC01561Q8N1V8 128 aa7.16□□□□□ -1.26
SHMT2-218ENST00000555213 MYMXA0A1B0GTQ4 84 aa7.15□□□□□ -1.26
SHMT2-218ENST00000555213 H3BRM9 83 aa7.15□□□□□ -1.26
SHMT2-218ENST00000555213 HERVK_113P61574 105 aa7.15□□□□□ -1.26
SHMT2-218ENST00000555213 KIAA0087Q14695 138 aa7.15□□□□□ -1.26
SHMT2-218ENST00000555213 PLEKHB2Q96CS7 222 aa7.15□□□□□ -1.26
SHMT2-218ENST00000555213 GVQW2A0A096LPI5 108 aaPredicted RBP7.14□□□□□ -1.27
SHMT2-218ENST00000555213 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.14□□□□□ -1.27
SHMT2-218ENST00000555213 ZNF561-AS1K7EIQ3 104 aa7.13□□□□□ -1.27
SHMT2-218ENST00000555213 GCSHP23434 173 aa7.13□□□□□ -1.27
SHMT2-218ENST00000555213 CTAG1AP78358 180 aa7.13□□□□□ -1.27
SHMT2-218ENST00000555213 HIGD2BQ4VC39 106 aa7.13□□□□□ -1.27
SHMT2-218ENST00000555213 C15orf56Q8N910 161 aa7.13□□□□□ -1.27
SHMT2-218ENST00000555213 ZNF625Q96I27 306 aaPredicted RBP7.13□□□□□ -1.27
SHMT2-218ENST00000555213 ZNF815PA8K554 130 aa7.12□□□□□ -1.27
SHMT2-218ENST00000555213 HIGD1BQ9P298 99 aa7.12□□□□□ -1.27
SHMT2-218ENST00000555213 DNAH17Q9UFH2 4485 aa7.12□□□□□ -1.27
SHMT2-218ENST00000555213 LGALS3P17931 250 aaKnown RBP7.11□□□□□ -1.27
SHMT2-218ENST00000555213 FUSP35637 526 aaKnown RBP eCLIP7.11□□□□□ -1.27
SHMT2-218ENST00000555213 CNBPP62633 177 aaKnown RBP7.11□□□□□ -1.27
SHMT2-218ENST00000555213 SPAG11BQ08648 103 aa7.11□□□□□ -1.27
SHMT2-218ENST00000555213 COX7B2Q8TF08 81 aa7.11□□□□□ -1.27
SHMT2-218ENST00000555213 ORAOV1Q8WV07 137 aa7.11□□□□□ -1.27
SHMT2-218ENST00000555213 LITAFQ99732 161 aa7.11□□□□□ -1.27
SHMT2-218ENST00000555213 NDUFA12Q9UI09 145 aa7.11□□□□□ -1.27
SHMT2-218ENST00000555213 PKIGQ9Y2B9 76 aa7.11□□□□□ -1.27
SHMT2-218ENST00000555213 FRAS1Q86XX4 4008 aa7.11□□□□□ -1.27
SHMT2-218ENST00000555213 A0A0J9YXY3 114 aa7.1□□□□□ -1.27
SHMT2-218ENST00000555213 NDUFA1O15239 70 aa7.1□□□□□ -1.27
SHMT2-218ENST00000555213 HNRNPA3P51991 378 aaKnown RBP7.1□□□□□ -1.27
SHMT2-218ENST00000555213 FAT2Q9NYQ8 4349 aa7.1□□□□□ -1.27
SHMT2-218ENST00000555213 ADAMTSL4-AS1Q5T5F5 129 aa7.09□□□□□ -1.27
SHMT2-218ENST00000555213 Q8IZM0 81 aa7.09□□□□□ -1.27
SHMT2-218ENST00000555213 HECTD4Q9Y4D8 3996 aa7.09□□□□□ -1.28
SHMT2-218ENST00000555213 F8WDY8 70 aa7.08□□□□□ -1.28
SHMT2-218ENST00000555213 PRSS2P07478 247 aa7.08□□□□□ -1.28
SHMT2-218ENST00000555213 CARD19Q96LW7 228 aa7.08□□□□□ -1.28
SHMT2-218ENST00000555213 CAMK2N2Q96S95 79 aa7.08□□□□□ -1.28
SHMT2-218ENST00000555213 RYR1P21817 5038 aa7.08□□□□□ -1.28
SHMT2-218ENST00000555213 SYCNQ0VAF6 134 aa7.07□□□□□ -1.28
SHMT2-218ENST00000555213 C2orf82Q6UX34 121 aa7.07□□□□□ -1.28
SHMT2-218ENST00000555213 C9orf163Q8N9P6 203 aa7.07□□□□□ -1.28
SHMT2-218ENST00000555213 LINC00526Q96FQ7 95 aa7.07□□□□□ -1.28
SHMT2-218ENST00000555213 C2orf48Q96LS8 159 aa7.07□□□□□ -1.28
SHMT2-218ENST00000555213 SNHG12Q9BXW3 62 aa7.07□□□□□ -1.28
SHMT2-218ENST00000555213 TOMM7Q9P0U1 55 aa7.07□□□□□ -1.28
SHMT2-218ENST00000555213 KIAA1109Q2LD37 5005 aa7.06□□□□□ -1.28
SHMT2-218ENST00000555213 KRTAP10-1P60331 282 aa7.06□□□□□ -1.28
SHMT2-218ENST00000555213 C6orf226Q5I0X4 101 aa7.06□□□□□ -1.28
SHMT2-218ENST00000555213 C10orf25Q5T742 122 aa7.06□□□□□ -1.28
SHMT2-218ENST00000555213 SPANXB1Q9NS25 103 aaPredicted RBP7.06□□□□□ -1.28
SHMT2-218ENST00000555213 EIF4EBP3O60516 100 aaPredicted RBP7.05□□□□□ -1.28
SHMT2-218ENST00000555213 SLPIP03973 132 aa7.05□□□□□ -1.28
SHMT2-218ENST00000555213 CKS1BP61024 79 aa7.05□□□□□ -1.28
SHMT2-218ENST00000555213 LINC01620Q4KN68 170 aa7.05□□□□□ -1.28
SHMT2-218ENST00000555213 BVES-AS1Q5T3Y7 98 aa7.05□□□□□ -1.28
SHMT2-218ENST00000555213 DNAH11Q96DT5 4516 aa7.05□□□□□ -1.28
SHMT2-218ENST00000555213 TIMM17BO60830 172 aa7.04□□□□□ -1.28
SHMT2-218ENST00000555213 CDK2AP2O75956 126 aa7.04□□□□□ -1.28
SHMT2-218ENST00000555213 CXCL5P42830 114 aa7.04□□□□□ -1.28
SHMT2-218ENST00000555213 HINT1P49773 126 aaPredicted RBP7.04□□□□□ -1.28
SHMT2-218ENST00000555213 HERV-K104P63124 156 aa7.04□□□□□ -1.28
SHMT2-218ENST00000555213 TAL2Q16559 108 aa7.04□□□□□ -1.28
SHMT2-218ENST00000555213 UNQ6190/PRO20217Q6UXQ8 127 aa7.04□□□□□ -1.28
SHMT2-218ENST00000555213 SCGB1D4Q6XE38 83 aa7.04□□□□□ -1.28
SHMT2-218ENST00000555213 SMIM13P0DJ93 91 aa7.03□□□□□ -1.28
SHMT2-218ENST00000555213 HSD52Q0P140 79 aa7.03□□□□□ -1.28
SHMT2-218ENST00000555213 Q6ZRU5 148 aa7.03□□□□□ -1.28
SHMT2-218ENST00000555213 CEND1Q8N111 149 aa7.03□□□□□ -1.28
SHMT2-218ENST00000555213 PKD1P98161 4303 aa7.02□□□□□ -1.29
SHMT2-218ENST00000555213 M0R143 59 aa7.02□□□□□ -1.29
SHMT2-218ENST00000555213 FXYD2P54710 66 aa7.02□□□□□ -1.29
SHMT2-218ENST00000555213 RNF151Q2KHN1 245 aa7.02□□□□□ -1.29
SHMT2-218ENST00000555213 C9orf116Q5BN46 136 aaPredicted RBP7.02□□□□□ -1.29
SHMT2-218ENST00000555213 MUSTN1Q8IVN3 82 aa7.02□□□□□ -1.29
SHMT2-218ENST00000555213 SPANXDQ9BXN6 97 aa7.02□□□□□ -1.29
SHMT2-218ENST00000555213 SPANXCQ9NY87 97 aa7.02□□□□□ -1.29
SHMT2-218ENST00000555213 LINC00474Q9P2X8 69 aa7.02□□□□□ -1.29
SHMT2-218ENST00000555213 TRBV30A0A0K0K1B3 111 aa7.01□□□□□ -1.29
SHMT2-218ENST00000555213 LOC107984640A0A0U1RRK4 108 aa7.01□□□□□ -1.29
SHMT2-218ENST00000555213 PTTG1IPP53801 180 aa7.01□□□□□ -1.29
SHMT2-218ENST00000555213 SOSTDC1Q6X4U4 206 aa7.01□□□□□ -1.29
SHMT2-218ENST00000555213 SDIM1Q6ZPB5 146 aa7.01□□□□□ -1.29
SHMT2-218ENST00000555213 Q6ZSA8 131 aa7.01□□□□□ -1.29
SHMT2-218ENST00000555213 DAND5Q8N907 189 aa7.01□□□□□ -1.29
SHMT2-218ENST00000555213 HIST1H4GQ99525 98 aa7.01□□□□□ -1.29
SHMT2-218ENST00000555213 C6orf48Q9UBA6 75 aa7.01□□□□□ -1.29
SHMT2-218ENST00000555213 A0A0U1RRA0 63 aa7□□□□□ -1.29
SHMT2-218ENST00000555213 SRSF9Q13242 221 aaKnown RBP eCLIP7□□□□□ -1.29
SHMT2-218ENST00000555213 SFTA2Q6UW10 78 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 674.6 ms