RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 KIAA0087Q14695 138 aa7.78□□□□□ -1.16
NEK9-202ENST00000553823 TP73-AS1Q9UF72 201 aa7.78□□□□□ -1.16
NEK9-202ENST00000553823 USP17L23D6RBM5 183 aa7.77□□□□□ -1.17
NEK9-202ENST00000553823 CXCL5P42830 114 aa7.77□□□□□ -1.17
NEK9-202ENST00000553823 SFTA2Q6UW10 78 aa7.77□□□□□ -1.17
NEK9-202ENST00000553823 C6orf223Q8N319 242 aa7.77□□□□□ -1.17
NEK9-202ENST00000553823 ZNF625Q96I27 306 aaPredicted RBP7.77□□□□□ -1.17
NEK9-202ENST00000553823 GVQW2A0A096LPI5 108 aaPredicted RBP7.76□□□□□ -1.17
NEK9-202ENST00000553823 ZNF561-AS1K7EIQ3 104 aa7.76□□□□□ -1.17
NEK9-202ENST00000553823 CKS1BP61024 79 aa7.76□□□□□ -1.17
NEK9-202ENST00000553823 HERV-K104P63124 156 aa7.76□□□□□ -1.17
NEK9-202ENST00000553823 HIGD2BQ4VC39 106 aa7.76□□□□□ -1.17
NEK9-202ENST00000553823 Q6ZRN7 208 aaPredicted RBP7.76□□□□□ -1.17
NEK9-202ENST00000553823 C1orf134Q5TEV5 83 aa7.75□□□□□ -1.17
NEK9-202ENST00000553823 C2orf82Q6UX34 121 aa7.75□□□□□ -1.17
NEK9-202ENST00000553823 SCGB1D4Q6XE38 83 aa7.75□□□□□ -1.17
NEK9-202ENST00000553823 NTN5Q8WTR8 489 aaPredicted RBP7.75□□□□□ -1.17
NEK9-202ENST00000553823 LINC00526Q96FQ7 95 aa7.75□□□□□ -1.17
NEK9-202ENST00000553823 A0A0J9YXY3 114 aa7.74□□□□□ -1.17
NEK9-202ENST00000553823 LCE6AA0A183 80 aa7.74□□□□□ -1.17
NEK9-202ENST00000553823 LECT2O14960 151 aa7.74□□□□□ -1.17
NEK9-202ENST00000553823 HNRNPA3P51991 378 aaKnown RBP7.74□□□□□ -1.17
NEK9-202ENST00000553823 C2orf91Q6ZV80 131 aa7.74□□□□□ -1.17
NEK9-202ENST00000553823 C2orf48Q96LS8 159 aa7.74□□□□□ -1.17
NEK9-202ENST00000553823 F8WDY8 70 aa7.73□□□□□ -1.17
NEK9-202ENST00000553823 DDTP30046 118 aa7.73□□□□□ -1.17
NEK9-202ENST00000553823 HIGD1BQ9P298 99 aa7.73□□□□□ -1.17
NEK9-202ENST00000553823 DNAH10Q8IVF4 4471 aa7.73□□□□□ -1.17
NEK9-202ENST00000553823 PCP4L1A6NKN8 68 aa7.72□□□□□ -1.17
NEK9-202ENST00000553823 WFDC2Q14508 124 aa7.72□□□□□ -1.17
NEK9-202ENST00000553823 C14orf177Q52M58 125 aa7.72□□□□□ -1.17
NEK9-202ENST00000553823 UNQ6190/PRO20217Q6UXQ8 127 aa7.72□□□□□ -1.17
NEK9-202ENST00000553823 CAMK2N2Q96S95 79 aa7.72□□□□□ -1.17
NEK9-202ENST00000553823 LRCOL1A6NCL2 159 aa7.71□□□□□ -1.18
NEK9-202ENST00000553823 LINC00587B1AMM8 73 aa7.71□□□□□ -1.18
NEK9-202ENST00000553823 TIMM17BO60830 172 aa7.71□□□□□ -1.18
NEK9-202ENST00000553823 CIRBPQ14011 172 aaKnown RBP7.71□□□□□ -1.18
NEK9-202ENST00000553823 MEIG1Q5JSS6 88 aa7.71□□□□□ -1.18
NEK9-202ENST00000553823 C10orf25Q5T742 122 aa7.71□□□□□ -1.18
NEK9-202ENST00000553823 TMEM238C9JI98 176 aa7.7□□□□□ -1.18
NEK9-202ENST00000553823 SYCNQ0VAF6 134 aa7.7□□□□□ -1.18
NEK9-202ENST00000553823 ERG28Q9UKR5 140 aa7.7□□□□□ -1.18
NEK9-202ENST00000553823 SACSQ9NZJ4 4579 aa7.7□□□□□ -1.18
NEK9-202ENST00000553823 TRBV30A0A0K0K1B3 111 aa7.69□□□□□ -1.18
NEK9-202ENST00000553823 SMIM13P0DJ93 91 aa7.69□□□□□ -1.18
NEK9-202ENST00000553823 CTAG1AP78358 180 aa7.69□□□□□ -1.18
NEK9-202ENST00000553823 Q6ZRU5 148 aa7.69□□□□□ -1.18
NEK9-202ENST00000553823 LITAFQ99732 161 aa7.69□□□□□ -1.18
NEK9-202ENST00000553823 SPANXB1Q9NS25 103 aaPredicted RBP7.69□□□□□ -1.18
NEK9-202ENST00000553823 C6orf48Q9UBA6 75 aa7.69□□□□□ -1.18
NEK9-202ENST00000553823 A0A087WTM6 91 aa7.68□□□□□ -1.18
NEK9-202ENST00000553823 A0A0U1RRA0 63 aa7.68□□□□□ -1.18
NEK9-202ENST00000553823 SLPIP03973 132 aa7.68□□□□□ -1.18
NEK9-202ENST00000553823 LINC00158P58513 81 aa7.68□□□□□ -1.18
NEK9-202ENST00000553823 SRSF9Q13242 221 aaKnown RBP eCLIP7.68□□□□□ -1.18
NEK9-202ENST00000553823 COX17Q14061 63 aa7.68□□□□□ -1.18
NEK9-202ENST00000553823 CARD19Q96LW7 228 aa7.68□□□□□ -1.18
NEK9-202ENST00000553823 HIST1H4GQ99525 98 aa7.68□□□□□ -1.18
NEK9-202ENST00000553823 DNAH2Q9P225 4427 aa7.68□□□□□ -1.18
NEK9-202ENST00000553823 PFN2P35080 140 aa7.67□□□□□ -1.18
NEK9-202ENST00000553823 HSD52Q0P140 79 aa7.67□□□□□ -1.18
NEK9-202ENST00000553823 TAL2Q16559 108 aa7.67□□□□□ -1.18
NEK9-202ENST00000553823 C9orf116Q5BN46 136 aaPredicted RBP7.67□□□□□ -1.18
NEK9-202ENST00000553823 ADAMTSL4-AS1Q5T5F5 129 aa7.67□□□□□ -1.18
NEK9-202ENST00000553823 Q6ZVH6 145 aa7.67□□□□□ -1.18
NEK9-202ENST00000553823 SPANXDQ9BXN6 97 aa7.67□□□□□ -1.18
NEK9-202ENST00000553823 KRTAP4-8Q9BYQ9 185 aa7.67□□□□□ -1.18
NEK9-202ENST00000553823 SPANXCQ9NY87 97 aa7.67□□□□□ -1.18
NEK9-202ENST00000553823 CNBPP62633 177 aaKnown RBP7.66□□□□□ -1.18
NEK9-202ENST00000553823 RNF151Q2KHN1 245 aa7.66□□□□□ -1.18
NEK9-202ENST00000553823 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.65□□□□□ -1.18
NEK9-202ENST00000553823 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.65□□□□□ -1.18
NEK9-202ENST00000553823 RTL8CO15255 209 aa7.65□□□□□ -1.18
NEK9-202ENST00000553823 MIR7-3HGQ8N6C7 128 aa7.65□□□□□ -1.18
NEK9-202ENST00000553823 Q8N814 137 aa7.65□□□□□ -1.18
NEK9-202ENST00000553823 DAND5Q8N907 189 aa7.65□□□□□ -1.18
NEK9-202ENST00000553823 DNAH17Q9UFH2 4485 aa7.65□□□□□ -1.19
NEK9-202ENST00000553823 IFITM1P13164 125 aa7.64□□□□□ -1.19
NEK9-202ENST00000553823 CEND1Q8N111 149 aa7.64□□□□□ -1.19
NEK9-202ENST00000553823 HYDINQ4G0P3 5121 aa7.64□□□□□ -1.19
NEK9-202ENST00000553823 FRAS1Q86XX4 4008 aa7.64□□□□□ -1.19
NEK9-202ENST00000553823 NDUFC2-KCTD14E9PQ53 114 aa7.63□□□□□ -1.19
NEK9-202ENST00000553823 EREGO14944 169 aa7.63□□□□□ -1.19
NEK9-202ENST00000553823 GCSHP23434 173 aa7.63□□□□□ -1.19
NEK9-202ENST00000553823 TNP2Q05952 138 aa7.63□□□□□ -1.19
NEK9-202ENST00000553823 MUSTN1Q8IVN3 82 aa7.63□□□□□ -1.19
NEK9-202ENST00000553823 LINC00308Q8TCZ7 52 aa7.63□□□□□ -1.19
NEK9-202ENST00000553823 COPS9Q8WXC6 57 aa7.63□□□□□ -1.19
NEK9-202ENST00000553823 M0R143 59 aa7.62□□□□□ -1.19
NEK9-202ENST00000553823 TLX1NBP0CAT3 122 aa7.62□□□□□ -1.19
NEK9-202ENST00000553823 HINT1P49773 126 aaPredicted RBP7.62□□□□□ -1.19
NEK9-202ENST00000553823 PTTG1IPP53801 180 aa7.62□□□□□ -1.19
NEK9-202ENST00000553823 NPC2P61916 151 aa7.62□□□□□ -1.19
NEK9-202ENST00000553823 RPL24P83731 157 aaKnown RBP7.61□□□□□ -1.19
NEK9-202ENST00000553823 BVES-AS1Q5T3Y7 98 aa7.61□□□□□ -1.19
NEK9-202ENST00000553823 SOSTDC1Q6X4U4 206 aa7.61□□□□□ -1.19
NEK9-202ENST00000553823 PPDPFQ9H3Y8 114 aa7.61□□□□□ -1.19
NEK9-202ENST00000553823 SND1-IT1Q9HBX3 110 aa7.61□□□□□ -1.19
NEK9-202ENST00000553823 LOC107984640A0A0U1RRK4 108 aa7.6□□□□□ -1.19
NEK9-202ENST00000553823 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms