RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 TRBV7-7A0A0K0K1E9 115 aa4.81□□□□□ -1.64
LINC-ROR-201ENST00000553704 GYPEP15421 78 aa4.81□□□□□ -1.64
LINC-ROR-201ENST00000553704 XCL1P47992 114 aa4.81□□□□□ -1.64
LINC-ROR-201ENST00000553704 CMC4P56277 68 aaPredicted RBP4.8□□□□□ -1.64
LINC-ROR-201ENST00000553704 Q8N3U1 123 aa4.8□□□□□ -1.64
LINC-ROR-201ENST00000553704 SMR3AQ99954 134 aa4.8□□□□□ -1.64
LINC-ROR-201ENST00000553704 ATP5G1P05496 136 aa4.8□□□□□ -1.64
LINC-ROR-201ENST00000553704 X6R8D5 127 aa4.8□□□□□ -1.64
LINC-ROR-201ENST00000553704 UNC79Q9P2D8 2635 aa4.8□□□□□ -1.64
LINC-ROR-201ENST00000553704 IBA57-AS1B1ANH7 110 aa4.79□□□□□ -1.64
LINC-ROR-201ENST00000553704 MALP21145 153 aa4.79□□□□□ -1.64
LINC-ROR-201ENST00000553704 LINC00612Q8N6U2 182 aa4.79□□□□□ -1.64
LINC-ROR-201ENST00000553704 HILS1P60008 231 aa4.79□□□□□ -1.64
LINC-ROR-201ENST00000553704 LINC00482Q8N8I6 264 aa4.79□□□□□ -1.64
LINC-ROR-201ENST00000553704 TENM1Q9UKZ4 2725 aa4.79□□□□□ -1.64
LINC-ROR-201ENST00000553704 DEFB4AO15263 64 aa4.78□□□□□ -1.64
LINC-ROR-201ENST00000553704 PAX4O43316 350 aa4.78□□□□□ -1.64
LINC-ROR-201ENST00000553704 GAGE2AQ6NT46 116 aa4.78□□□□□ -1.64
LINC-ROR-201ENST00000553704 SDIM1Q6ZPB5 146 aa4.78□□□□□ -1.64
LINC-ROR-201ENST00000553704 KIR2DL5BQ8NHK3 375 aa4.78□□□□□ -1.64
LINC-ROR-201ENST00000553704 FASNP49327 2511 aaKnown RBP4.78□□□□□ -1.64
LINC-ROR-201ENST00000553704 FAM236AA0A1B0GUQ0 79 aa4.78□□□□□ -1.64
LINC-ROR-201ENST00000553704 FAM236BA0A1B0GV22 79 aa4.78□□□□□ -1.64
LINC-ROR-201ENST00000553704 LECT2O14960 151 aa4.78□□□□□ -1.64
LINC-ROR-201ENST00000553704 SLPIP03973 132 aa4.78□□□□□ -1.64
LINC-ROR-201ENST00000553704 ACYP1P07311 99 aa4.77□□□□□ -1.65
LINC-ROR-201ENST00000553704 PRR3P79522 188 aaKnown RBP4.77□□□□□ -1.65
LINC-ROR-201ENST00000553704 C3orf56Q8N813 242 aa4.77□□□□□ -1.65
LINC-ROR-201ENST00000553704 C14orf132Q9NPU4 83 aa4.77□□□□□ -1.65
LINC-ROR-201ENST00000553704 HELZ2Q9BYK8 2649 aaKnown RBP4.77□□□□□ -1.65
LINC-ROR-201ENST00000553704 LY6G6DO95868 133 aa4.77□□□□□ -1.65
LINC-ROR-201ENST00000553704 C6orf226Q5I0X4 101 aa4.77□□□□□ -1.65
LINC-ROR-201ENST00000553704 OR13C6PQ8NH95 151 aa4.77□□□□□ -1.65
LINC-ROR-201ENST00000553704 DNAL4O96015 105 aa4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 NANOS2P60321 138 aaKnown RBP4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 LINC00643Q86TS7 51 aa4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 Q8NDZ9 215 aa4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 IGLV10-54A0A075B6I4 117 aa4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 SS18Q15532 418 aa4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 Q8IZM0 81 aa4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 A0A1B0GUV1 79 aa4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 ZNF561-AS1K7EIQ3 104 aa4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 NCR3O14931 201 aa4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 INAFM2P0DMQ5 153 aa4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 DEFB135Q30KP9 77 aa4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 C9orf116Q5BN46 136 aaPredicted RBP4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 LINC00269Q8N2A0 174 aa4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 PRO0255Q9UI72 69 aa4.76□□□□□ -1.65
LINC-ROR-201ENST00000553704 TRRAPQ9Y4A5 3859 aa4.75□□□□□ -1.65
LINC-ROR-201ENST00000553704 KIAA0087Q14695 138 aa4.75□□□□□ -1.65
LINC-ROR-201ENST00000553704 HIVEP2P31629 2446 aa4.75□□□□□ -1.65
LINC-ROR-201ENST00000553704 OBSCN-AS1Q96MR7 158 aa4.75□□□□□ -1.65
LINC-ROR-201ENST00000553704 CELA1Q9UNI1 258 aa4.75□□□□□ -1.65
LINC-ROR-201ENST00000553704 OTOGQ6ZRI0 2925 aa4.74□□□□□ -1.65
LINC-ROR-201ENST00000553704 HIVEP1P15822 2718 aa4.74□□□□□ -1.65
LINC-ROR-201ENST00000553704 H0YGX0 51 aa4.74□□□□□ -1.65
LINC-ROR-201ENST00000553704 CHCHD10Q8WYQ3 142 aaPredicted RBP4.74□□□□□ -1.65
LINC-ROR-201ENST00000553704 IMUPQ9GZP8 106 aa4.74□□□□□ -1.65
LINC-ROR-201ENST00000553704 LINC00846Q9NV44 126 aa4.74□□□□□ -1.65
LINC-ROR-201ENST00000553704 IGHV4-28A0A0C4DH34 117 aa4.73□□□□□ -1.65
LINC-ROR-201ENST00000553704 KLK5Q9Y337 293 aaPredicted RBP4.73□□□□□ -1.65
LINC-ROR-201ENST00000553704 ANGP03950 147 aaKnown RBP4.73□□□□□ -1.65
LINC-ROR-201ENST00000553704 REG3AQ06141 175 aa4.73□□□□□ -1.65
LINC-ROR-201ENST00000553704 CD164L2Q6UWJ8 174 aa4.73□□□□□ -1.65
LINC-ROR-201ENST00000553704 C6orf223Q8N319 242 aa4.73□□□□□ -1.65
LINC-ROR-201ENST00000553704 LINC00526Q96FQ7 95 aa4.73□□□□□ -1.65
LINC-ROR-201ENST00000553704 NSD1Q96L73 2696 aaPredicted RBP4.73□□□□□ -1.65
LINC-ROR-201ENST00000553704 IGKV3D-7A0A0C4DH55 119 aa4.72□□□□□ -1.65
LINC-ROR-201ENST00000553704 C10orf25Q5T742 122 aa4.72□□□□□ -1.65
LINC-ROR-201ENST00000553704 HECTD1Q9ULT8 2610 aa4.72□□□□□ -1.65
LINC-ROR-201ENST00000553704 KMT2BQ9UMN6 2715 aaPredicted RBP4.72□□□□□ -1.65
LINC-ROR-201ENST00000553704 SMIM9A6NGZ8 99 aa4.72□□□□□ -1.65
LINC-ROR-201ENST00000553704 SEC61GP60059 68 aa4.72□□□□□ -1.65
LINC-ROR-201ENST00000553704 LINC00167Q96N53 147 aa4.72□□□□□ -1.65
LINC-ROR-201ENST00000553704 LYRM9A8MSI8 78 aa4.71□□□□□ -1.66
LINC-ROR-201ENST00000553704 LINC01561Q8N1V8 128 aa4.71□□□□□ -1.66
LINC-ROR-201ENST00000553704 ORMDL1Q9P0S3 153 aa4.71□□□□□ -1.66
LINC-ROR-201ENST00000553704 A0A087WVE0 104 aa4.71□□□□□ -1.66
LINC-ROR-201ENST00000553704 WIPF1O43516 503 aa4.71□□□□□ -1.66
LINC-ROR-201ENST00000553704 HTN3P15516 51 aa4.71□□□□□ -1.66
LINC-ROR-201ENST00000553704 CXCL5P42830 114 aa4.71□□□□□ -1.66
LINC-ROR-201ENST00000553704 Q8NAQ8 132 aa4.71□□□□□ -1.66
LINC-ROR-201ENST00000553704 DAD1P61803 113 aa4.7□□□□□ -1.66
LINC-ROR-201ENST00000553704 HIST1H4AP62805 103 aaKnown RBP4.7□□□□□ -1.66
LINC-ROR-201ENST00000553704 Q8N814 137 aa4.7□□□□□ -1.66
LINC-ROR-201ENST00000553704 C6orf99Q4VX62 202 aa4.7□□□□□ -1.66
LINC-ROR-201ENST00000553704 UNQ6190/PRO20217Q6UXQ8 127 aa4.7□□□□□ -1.66
LINC-ROR-201ENST00000553704 NOTCH2Q04721 2471 aa4.7□□□□□ -1.66
LINC-ROR-201ENST00000553704 NDUFC2O95298 119 aa4.69□□□□□ -1.66
LINC-ROR-201ENST00000553704 C9orf66Q5T8R8 295 aa4.69□□□□□ -1.66
LINC-ROR-201ENST00000553704 ATRQ13535 2644 aa4.69□□□□□ -1.66
LINC-ROR-201ENST00000553704 INAFM1C9JVW0 142 aa4.69□□□□□ -1.66
LINC-ROR-201ENST00000553704 SPAG11BQ08648 103 aa4.69□□□□□ -1.66
LINC-ROR-201ENST00000553704 COX17Q14061 63 aa4.69□□□□□ -1.66
LINC-ROR-201ENST00000553704 Q6JHZ5 121 aa4.69□□□□□ -1.66
LINC-ROR-201ENST00000553704 SMIM20Q8N5G0 67 aa4.69□□□□□ -1.66
LINC-ROR-201ENST00000553704 C3orf22Q8N5N4 141 aa4.69□□□□□ -1.66
LINC-ROR-201ENST00000553704 C2orf48Q96LS8 159 aa4.69□□□□□ -1.66
LINC-ROR-201ENST00000553704 J3QKU1 62 aa4.68□□□□□ -1.66
LINC-ROR-201ENST00000553704 C5orf47Q569G3 176 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms