RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 AKAP14Q86UN6 197 aa8.27□□□□□ -1.09
CHMP1A-210ENST00000551981 AMELXQ99217 191 aa8.27□□□□□ -1.09
CHMP1A-210ENST00000551981 LOC389332A0A1B0GUA5 103 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 RPL37AP8A6NKH3 93 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 NPSP0C0P6 89 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 HERVK_113P63121 156 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 SEC11AP67812 179 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 KRTAP13-2Q52LG2 175 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 ZC2HC1BQ5TFG8 222 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 C2orf66Q6UXQ4 117 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 LINC00173Q6ZV60 143 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 ATP5L2Q7Z4Y8 100 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 FAM19A3Q7Z5A8 133 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 LINC00167Q96N53 147 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 ANAPC11Q9NYG5 84 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 LAMTOR2Q9Y2Q5 125 aa8.26□□□□□ -1.09
CHMP1A-210ENST00000551981 CXCL5P42830 114 aa8.25□□□□□ -1.09
CHMP1A-210ENST00000551981 UBE2AP49459 152 aa8.25□□□□□ -1.09
CHMP1A-210ENST00000551981 MAP1LC3AQ9H492 121 aa8.25□□□□□ -1.09
CHMP1A-210ENST00000551981 IGLV7-46A0A075B6I9 117 aa8.24□□□□□ -1.09
CHMP1A-210ENST00000551981 PRSS47A8MTI9 375 aa8.24□□□□□ -1.09
CHMP1A-210ENST00000551981 ORMDL2Q53FV1 153 aa8.24□□□□□ -1.09
CHMP1A-210ENST00000551981 PAPPA-AS1Q5QFB9 102 aa8.24□□□□□ -1.09
CHMP1A-210ENST00000551981 GEMIN7Q9H840 131 aaKnown RBP8.24□□□□□ -1.09
CHMP1A-210ENST00000551981 IGKV2D-26A0A0A0MRZ7 120 aa8.23□□□□□ -1.09
CHMP1A-210ENST00000551981 GAGE10A6NGK3 116 aa8.23□□□□□ -1.09
CHMP1A-210ENST00000551981 CTAG1AP78358 180 aa8.23□□□□□ -1.09
CHMP1A-210ENST00000551981 Q8N8P6 123 aa8.23□□□□□ -1.09
CHMP1A-210ENST00000551981 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
CHMP1A-210ENST00000551981 PEA15Q15121 130 aa8.22□□□□□ -1.09
CHMP1A-210ENST00000551981 KRTAP13-1Q8IUC0 172 aa8.22□□□□□ -1.09
CHMP1A-210ENST00000551981 NKAPP1Q8N9T2 125 aa8.22□□□□□ -1.09
CHMP1A-210ENST00000551981 IGIPA6NJ69 53 aa8.21□□□□□ -1.1
CHMP1A-210ENST00000551981 C9JQL5 133 aa8.21□□□□□ -1.1
CHMP1A-210ENST00000551981 K7EMI3 77 aa8.21□□□□□ -1.1
CHMP1A-210ENST00000551981 IGLV5-37A0A075B6J1 123 aa8.2□□□□□ -1.1
CHMP1A-210ENST00000551981 PNRC1Q12796 327 aaPredicted RBP8.2□□□□□ -1.1
CHMP1A-210ENST00000551981 G0S2P27469 103 aa8.19□□□□□ -1.1
CHMP1A-210ENST00000551981 PDZD11Q5EBL8 140 aa8.18□□□□□ -1.1
CHMP1A-210ENST00000551981 COX7B2Q8TF08 81 aa8.18□□□□□ -1.1
CHMP1A-210ENST00000551981 IGKV2-28A0A075B6P5 120 aa8.17□□□□□ -1.1
CHMP1A-210ENST00000551981 SMIM1B2RUZ4 78 aa8.17□□□□□ -1.1
CHMP1A-210ENST00000551981 IGKV2D-28P01615 120 aa8.17□□□□□ -1.1
CHMP1A-210ENST00000551981 SRSF3P84103 164 aaKnown RBP8.17□□□□□ -1.1
CHMP1A-210ENST00000551981 TIMM17AQ99595 171 aa8.17□□□□□ -1.1
CHMP1A-210ENST00000551981 PPDPFQ9H3Y8 114 aa8.17□□□□□ -1.1
CHMP1A-210ENST00000551981 RAB5BP61020 215 aa8.16□□□□□ -1.1
CHMP1A-210ENST00000551981 NXT2Q9NPJ8 142 aaKnown RBP8.16□□□□□ -1.1
CHMP1A-210ENST00000551981 PRLHP81277 87 aa8.15□□□□□ -1.1
CHMP1A-210ENST00000551981 TINCRA0A1B0GVN0 87 aa8.14□□□□□ -1.11
CHMP1A-210ENST00000551981 FAM19A1Q7Z5A9 133 aa8.14□□□□□ -1.11
CHMP1A-210ENST00000551981 TOMM6Q96B49 74 aa8.14□□□□□ -1.11
CHMP1A-210ENST00000551981 hCG_2014768A0A024R1R8 64 aa8.13□□□□□ -1.11
CHMP1A-210ENST00000551981 LINC01547P58512 204 aaPredicted RBP8.13□□□□□ -1.11
CHMP1A-210ENST00000551981 SPAG11AQ6PDA7 123 aa8.13□□□□□ -1.11
CHMP1A-210ENST00000551981 LINC00337Q8N6G1 96 aa8.13□□□□□ -1.11
CHMP1A-210ENST00000551981 FSIP2Q5CZC0 6907 aa8.12□□□□□ -1.11
CHMP1A-210ENST00000551981 IGLV5-45A0A087WSX0 123 aa8.12□□□□□ -1.11
CHMP1A-210ENST00000551981 SCO1O75880 301 aa8.12□□□□□ -1.11
CHMP1A-210ENST00000551981 ATP5LO75964 103 aa8.12□□□□□ -1.11
CHMP1A-210ENST00000551981 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
CHMP1A-210ENST00000551981 ERASQ7Z444 233 aa8.12□□□□□ -1.11
CHMP1A-210ENST00000551981 SCGB3A1Q96QR1 104 aa8.12□□□□□ -1.11
CHMP1A-210ENST00000551981 TMEM126AQ9H061 195 aa8.12□□□□□ -1.11
CHMP1A-210ENST00000551981 TMEM238C9JI98 176 aa8.1□□□□□ -1.11
CHMP1A-210ENST00000551981 SPINK8P0C7L1 97 aa8.1□□□□□ -1.11
CHMP1A-210ENST00000551981 C3orf22Q8N5N4 141 aa8.1□□□□□ -1.11
CHMP1A-210ENST00000551981 PLEKHB2Q96CS7 222 aa8.1□□□□□ -1.11
CHMP1A-210ENST00000551981 GNB1LQ9BYB4 327 aa8.1□□□□□ -1.11
CHMP1A-210ENST00000551981 MT-ND4LP03901 98 aa8.09□□□□□ -1.11
CHMP1A-210ENST00000551981 PFN2P35080 140 aa8.09□□□□□ -1.11
CHMP1A-210ENST00000551981 RPL24P83731 157 aaKnown RBP8.09□□□□□ -1.11
CHMP1A-210ENST00000551981 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
CHMP1A-210ENST00000551981 CBLN2Q8IUK8 224 aa8.09□□□□□ -1.11
CHMP1A-210ENST00000551981 ANAPC16Q96DE5 110 aa8.09□□□□□ -1.11
CHMP1A-210ENST00000551981 MRPL18Q9H0U6 180 aaKnown RBP8.09□□□□□ -1.11
CHMP1A-210ENST00000551981 LINC01549A6NIU2 74 aa8.08□□□□□ -1.12
CHMP1A-210ENST00000551981 H3BRM9 83 aa8.08□□□□□ -1.12
CHMP1A-210ENST00000551981 LCE2DQ5TA82 110 aaPredicted RBP8.08□□□□□ -1.12
CHMP1A-210ENST00000551981 M0R378 163 aa8.07□□□□□ -1.12
CHMP1A-210ENST00000551981 VPREB1P12018 145 aa8.07□□□□□ -1.12
CHMP1A-210ENST00000551981 ADCYAP1P18509 176 aa8.07□□□□□ -1.12
CHMP1A-210ENST00000551981 ASB16-AS1Q495Z4 193 aa8.07□□□□□ -1.12
CHMP1A-210ENST00000551981 HIGD2AQ9BW72 106 aa8.07□□□□□ -1.12
CHMP1A-210ENST00000551981 CST9LQ9H4G1 147 aa8.07□□□□□ -1.12
CHMP1A-210ENST00000551981 KRTAP13-3Q3SY46 172 aa8.06□□□□□ -1.12
CHMP1A-210ENST00000551981 SND1-IT1Q9HBX3 110 aa8.06□□□□□ -1.12
CHMP1A-210ENST00000551981 SEC61BP60468 96 aaKnown RBP8.05□□□□□ -1.12
CHMP1A-210ENST00000551981 PMVKQ15126 192 aa8.05□□□□□ -1.12
CHMP1A-210ENST00000551981 ERG28Q9UKR5 140 aa8.05□□□□□ -1.12
CHMP1A-210ENST00000551981 ZNF706Q9Y5V0 76 aaPredicted RBP8.05□□□□□ -1.12
CHMP1A-210ENST00000551981 COX17Q14061 63 aa8.04□□□□□ -1.12
CHMP1A-210ENST00000551981 SPRR4Q96PI1 79 aa8.04□□□□□ -1.12
CHMP1A-210ENST00000551981 RAB14P61106 215 aa8.03□□□□□ -1.12
CHMP1A-210ENST00000551981 KIAA1644Q3SXP7 199 aa8.02□□□□□ -1.13
CHMP1A-210ENST00000551981 Q8NBF4 154 aa8.02□□□□□ -1.13
CHMP1A-210ENST00000551981 CRCT1Q9UGL9 99 aa8.02□□□□□ -1.13
CHMP1A-210ENST00000551981 IGLV5-39A0A0G2JS06 123 aa8.01□□□□□ -1.13
CHMP1A-210ENST00000551981 NDUFA12Q9UI09 145 aa8.01□□□□□ -1.13
CHMP1A-210ENST00000551981 SPINK1P00995 79 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms