RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 PFN2P35080 140 aa14.29□□□□□ -0.12
PRDM4-205ENST00000550376 COL7A1Q02388 2944 aa14.29□□□□□ -0.12
PRDM4-205ENST00000550376 C6orf226Q5I0X4 101 aa14.29□□□□□ -0.12
PRDM4-205ENST00000550376 C11orf45Q8TAV5 145 aa14.29□□□□□ -0.12
PRDM4-205ENST00000550376 TCL1BO95988 128 aa14.29□□□□□ -0.12
PRDM4-205ENST00000550376 HUWE1Q7Z6Z7 4374 aaKnown RBP14.28□□□□□ -0.12
PRDM4-205ENST00000550376 WFDC10BQ8IUB3 73 aa14.28□□□□□ -0.12
PRDM4-205ENST00000550376 TEX48A0A1B0GUV7 120 aa14.28□□□□□ -0.12
PRDM4-205ENST00000550376 LINC00158P58513 81 aa14.27□□□□□ -0.13
PRDM4-205ENST00000550376 MIR7-3HGQ8N6C7 128 aa14.27□□□□□ -0.13
PRDM4-205ENST00000550376 DEFB131BA0A096LNP1 70 aa14.26□□□□□ -0.13
PRDM4-205ENST00000550376 HERV-K104P63124 156 aa14.26□□□□□ -0.13
PRDM4-205ENST00000550376 LINC00526Q96FQ7 95 aa14.26□□□□□ -0.13
PRDM4-205ENST00000550376 SH2D6Q7Z4S9 175 aa14.25□□□□□ -0.13
PRDM4-205ENST00000550376 STAB2Q8WWQ8 2551 aa14.25□□□□□ -0.13
PRDM4-205ENST00000550376 IFITM1P13164 125 aa14.25□□□□□ -0.13
PRDM4-205ENST00000550376 ESRGQ1W209 222 aa14.24□□□□□ -0.13
PRDM4-205ENST00000550376 CD164L2Q6UWJ8 174 aa14.24□□□□□ -0.13
PRDM4-205ENST00000550376 TRIAP1O43715 76 aa14.24□□□□□ -0.13
PRDM4-205ENST00000550376 COX7A2LO14548 114 aa14.23□□□□□ -0.13
PRDM4-205ENST00000550376 RPL13AP40429 203 aaKnown RBP14.23□□□□□ -0.13
PRDM4-205ENST00000550376 ENHOQ6UWT2 76 aa14.23□□□□□ -0.13
PRDM4-205ENST00000550376 PRO0461Q9UI25 63 aa14.23□□□□□ -0.13
PRDM4-205ENST00000550376 MALP21145 153 aa14.22□□□□□ -0.13
PRDM4-205ENST00000550376 UBE2WQ96B02 151 aa14.22□□□□□ -0.13
PRDM4-205ENST00000550376 GAGE12HA6NDE8 117 aa14.22□□□□□ -0.13
PRDM4-205ENST00000550376 ETDBQ3ZM63 59 aa14.22□□□□□ -0.13
PRDM4-205ENST00000550376 FOXI1Q12951 378 aa14.21□□□□□ -0.13
PRDM4-205ENST00000550376 SMCPP49901 116 aaPredicted RBP14.2□□□□□ -0.14
PRDM4-205ENST00000550376 C9orf116Q5BN46 136 aaPredicted RBP14.2□□□□□ -0.14
PRDM4-205ENST00000550376 C6orf223Q8N319 242 aa14.2□□□□□ -0.14
PRDM4-205ENST00000550376 F8W1H4 67 aa14.19□□□□□ -0.14
PRDM4-205ENST00000550376 KIAA0087Q14695 138 aa14.18□□□□□ -0.14
PRDM4-205ENST00000550376 CKS1BP61024 79 aa14.18□□□□□ -0.14
PRDM4-205ENST00000550376 SPATA25Q9BR10 227 aa14.17□□□□□ -0.14
PRDM4-205ENST00000550376 Q8IZM0 81 aa14.17□□□□□ -0.14
PRDM4-205ENST00000550376 PRR34Q9NV39 138 aa14.17□□□□□ -0.14
PRDM4-205ENST00000550376 CLEC2BQ92478 149 aa14.16□□□□□ -0.14
PRDM4-205ENST00000550376 CCL18P55774 89 aa14.16□□□□□ -0.14
PRDM4-205ENST00000550376 TM2D3Q9BRN9 247 aa14.16□□□□□ -0.14
PRDM4-205ENST00000550376 H3BNG1 76 aa14.15□□□□□ -0.14
PRDM4-205ENST00000550376 IBA57-AS1B1ANH7 110 aa14.15□□□□□ -0.14
PRDM4-205ENST00000550376 SND1-IT1Q9HBX3 110 aa14.15□□□□□ -0.14
PRDM4-205ENST00000550376 TRBV30A0A0K0K1B3 111 aa14.14□□□□□ -0.15
PRDM4-205ENST00000550376 C10orf25Q5T742 122 aa14.14□□□□□ -0.15
PRDM4-205ENST00000550376 LYRM7Q5U5X0 104 aa14.14□□□□□ -0.15
PRDM4-205ENST00000550376 CRPP02741 224 aa14.13□□□□□ -0.15
PRDM4-205ENST00000550376 CFAP161Q6P656 301 aa14.13□□□□□ -0.15
PRDM4-205ENST00000550376 TRBV20-1A0A075B6N2 111 aa14.13□□□□□ -0.15
PRDM4-205ENST00000550376 IGKV2-28A0A075B6P5 120 aa14.12□□□□□ -0.15
PRDM4-205ENST00000550376 IGKV2D-28P01615 120 aa14.12□□□□□ -0.15
PRDM4-205ENST00000550376 LYSTQ99698 3801 aa14.12□□□□□ -0.15
PRDM4-205ENST00000550376 C9JAW5 83 aa14.12□□□□□ -0.15
PRDM4-205ENST00000550376 UNQ6190/PRO20217Q6UXQ8 127 aa14.12□□□□□ -0.15
PRDM4-205ENST00000550376 TENM2Q9NT68 2774 aa14.11□□□□□ -0.15
PRDM4-205ENST00000550376 LINC00337Q8N6G1 96 aa14.11□□□□□ -0.15
PRDM4-205ENST00000550376 PRR3P79522 188 aaKnown RBP14.11□□□□□ -0.15
PRDM4-205ENST00000550376 COPS9Q8WXC6 57 aa14.09□□□□□ -0.15
PRDM4-205ENST00000550376 SPAG11BQ08648 103 aa14.09□□□□□ -0.15
PRDM4-205ENST00000550376 DNAH9Q9NYC9 4486 aa14.08□□□□□ -0.16
PRDM4-205ENST00000550376 LINC01561Q8N1V8 128 aa14.07□□□□□ -0.16
PRDM4-205ENST00000550376 HIGD2BQ4VC39 106 aa14.07□□□□□ -0.16
PRDM4-205ENST00000550376 SIGMAR1Q99720 223 aa14.06□□□□□ -0.16
PRDM4-205ENST00000550376 ATXN8Q156A1 80 aa14.06□□□□□ -0.16
PRDM4-205ENST00000550376 TRAV10A0A0B4J240 114 aa14.05□□□□□ -0.16
PRDM4-205ENST00000550376 COX6CP09669 75 aa14.05□□□□□ -0.16
PRDM4-205ENST00000550376 LINC01620Q4KN68 170 aa14.05□□□□□ -0.16
PRDM4-205ENST00000550376 SLC25A20O43772 301 aa14.04□□□□□ -0.16
PRDM4-205ENST00000550376 Q9HAA7 133 aa14.04□□□□□ -0.16
PRDM4-205ENST00000550376 KLK5Q9Y337 293 aaPredicted RBP14.04□□□□□ -0.16
PRDM4-205ENST00000550376 OR13C6PQ8NH95 151 aa14.03□□□□□ -0.16
PRDM4-205ENST00000550376 LINC00588Q9Y4M8 146 aa14.02□□□□□ -0.16
PRDM4-205ENST00000550376 KRTAP26-1Q6PEX3 210 aa14.02□□□□□ -0.17
PRDM4-205ENST00000550376 Q8NDZ9 215 aa14.02□□□□□ -0.17
PRDM4-205ENST00000550376 TRAV8-4A0A0B4J246 113 aa14.01□□□□□ -0.17
PRDM4-205ENST00000550376 IGKV2D-24A0A075B6R9 120 aa14□□□□□ -0.17
PRDM4-205ENST00000550376 ANKRD29Q8N6D5 301 aa14□□□□□ -0.17
PRDM4-205ENST00000550376 DNHD1Q96M86 4753 aa14□□□□□ -0.17
PRDM4-205ENST00000550376 TRAV13-2A0A0B4J235 113 aa14□□□□□ -0.17
PRDM4-205ENST00000550376 CXCL5P42830 114 aa13.99□□□□□ -0.17
PRDM4-205ENST00000550376 LINC01556Q5JQF7 62 aa13.99□□□□□ -0.17
PRDM4-205ENST00000550376 SMIM11BQ8TCY0 68 aa13.99□□□□□ -0.17
PRDM4-205ENST00000550376 CARD19Q96LW7 228 aa13.99□□□□□ -0.17
PRDM4-205ENST00000550376 FAM218AQ96MZ4 157 aa13.99□□□□□ -0.17
PRDM4-205ENST00000550376 LST1O00453 97 aa13.98□□□□□ -0.17
PRDM4-205ENST00000550376 SCGB1A1P11684 91 aa13.97□□□□□ -0.17
PRDM4-205ENST00000550376 CSMD3Q7Z407 3707 aa13.97□□□□□ -0.17
PRDM4-205ENST00000550376 C1orf43Q9BWL3 253 aa13.96□□□□□ -0.17
PRDM4-205ENST00000550376 C6orf48Q9UBA6 75 aa13.96□□□□□ -0.17
PRDM4-205ENST00000550376 J3QR89 54 aa13.95□□□□□ -0.18
PRDM4-205ENST00000550376 TEN1Q86WV5 123 aa13.95□□□□□ -0.18
PRDM4-205ENST00000550376 NTN5Q8WTR8 489 aaPredicted RBP13.95□□□□□ -0.18
PRDM4-205ENST00000550376 ZNF561-AS1K7EIQ3 104 aa13.94□□□□□ -0.18
PRDM4-205ENST00000550376 C15orf56Q8N910 161 aa13.94□□□□□ -0.18
PRDM4-205ENST00000550376 PPDPFQ9H3Y8 114 aa13.94□□□□□ -0.18
PRDM4-205ENST00000550376 XAGE1AQ9HD64 81 aa13.94□□□□□ -0.18
PRDM4-205ENST00000550376 NCR3O14931 201 aa13.94□□□□□ -0.18
PRDM4-205ENST00000550376 COX17Q14061 63 aa13.94□□□□□ -0.18
PRDM4-205ENST00000550376 TRBV10-2A0A0K0K1G8 114 aa13.93□□□□□ -0.18
PRDM4-205ENST00000550376 C15orf53Q8NAA6 179 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms