RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CTAG1AP78358 180 aa11.52□□□□□ -0.56
HDAC7-227ENST00000548080 TOMM7Q9P0U1 55 aa11.52□□□□□ -0.56
HDAC7-227ENST00000548080 BIRC6Q9NR09 4857 aa11.52□□□□□ -0.57
HDAC7-227ENST00000548080 PKHD1P08F94 4074 aa11.52□□□□□ -0.57
HDAC7-227ENST00000548080 IGKV2D-24A0A075B6R9 120 aa11.51□□□□□ -0.57
HDAC7-227ENST00000548080 PSCAO43653 123 aa11.51□□□□□ -0.57
HDAC7-227ENST00000548080 APOMO95445 188 aa11.51□□□□□ -0.57
HDAC7-227ENST00000548080 SCGB1D4Q6XE38 83 aa11.51□□□□□ -0.57
HDAC7-227ENST00000548080 RMI2Q96E14 147 aa11.51□□□□□ -0.57
HDAC7-227ENST00000548080 NDUFA1O15239 70 aa11.51□□□□□ -0.57
HDAC7-227ENST00000548080 ORAOV1Q8WV07 137 aa11.5□□□□□ -0.57
HDAC7-227ENST00000548080 PRSS2P07478 247 aa11.49□□□□□ -0.57
HDAC7-227ENST00000548080 Q8IZM0 81 aa11.49□□□□□ -0.57
HDAC7-227ENST00000548080 LECT2O14960 151 aa11.48□□□□□ -0.57
HDAC7-227ENST00000548080 KRTAP10-2P60368 255 aa11.48□□□□□ -0.57
HDAC7-227ENST00000548080 C6orf226Q5I0X4 101 aa11.48□□□□□ -0.57
HDAC7-227ENST00000548080 ZNF625Q96I27 306 aaPredicted RBP11.48□□□□□ -0.57
HDAC7-227ENST00000548080 A0A087WTM6 91 aa11.47□□□□□ -0.57
HDAC7-227ENST00000548080 A0A0J9YXY3 114 aa11.47□□□□□ -0.57
HDAC7-227ENST00000548080 WFDC2Q14508 124 aa11.47□□□□□ -0.57
HDAC7-227ENST00000548080 HERV-K104P63124 156 aa11.46□□□□□ -0.57
HDAC7-227ENST00000548080 KIAA0087Q14695 138 aa11.46□□□□□ -0.57
HDAC7-227ENST00000548080 CFAP161Q6P656 301 aa11.45□□□□□ -0.58
HDAC7-227ENST00000548080 TM2D2Q9BX73 214 aa11.45□□□□□ -0.58
HDAC7-227ENST00000548080 COX11Q9Y6N1 276 aa11.45□□□□□ -0.58
HDAC7-227ENST00000548080 LRCOL1A6NCL2 159 aa11.44□□□□□ -0.58
HDAC7-227ENST00000548080 SPAG11BQ08648 103 aa11.44□□□□□ -0.58
HDAC7-227ENST00000548080 HSD52Q0P140 79 aa11.44□□□□□ -0.58
HDAC7-227ENST00000548080 SFTA2Q6UW10 78 aa11.44□□□□□ -0.58
HDAC7-227ENST00000548080 CXCL5P42830 114 aa11.44□□□□□ -0.58
HDAC7-227ENST00000548080 CKS1BP61024 79 aa11.44□□□□□ -0.58
HDAC7-227ENST00000548080 TIMM17BO60830 172 aa11.43□□□□□ -0.58
HDAC7-227ENST00000548080 TAL2Q16559 108 aa11.43□□□□□ -0.58
HDAC7-227ENST00000548080 HIST1H4GQ99525 98 aa11.43□□□□□ -0.58
HDAC7-227ENST00000548080 SPANXB1Q9NS25 103 aaPredicted RBP11.43□□□□□ -0.58
HDAC7-227ENST00000548080 M0R143 59 aa11.42□□□□□ -0.58
HDAC7-227ENST00000548080 EREGO14944 169 aa11.42□□□□□ -0.58
HDAC7-227ENST00000548080 HINT1P49773 126 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-227ENST00000548080 SRSF9Q13242 221 aaKnown RBP eCLIP11.42□□□□□ -0.58
HDAC7-227ENST00000548080 CIRBPQ14011 172 aaKnown RBP11.42□□□□□ -0.58
HDAC7-227ENST00000548080 DYNC1H1Q14204 4646 aaKnown RBP11.41□□□□□ -0.58
HDAC7-227ENST00000548080 TMEM238C9JI98 176 aa11.41□□□□□ -0.58
HDAC7-227ENST00000548080 C15orf56Q8N910 161 aa11.41□□□□□ -0.58
HDAC7-227ENST00000548080 C16orf90A8MZG2 172 aa11.4□□□□□ -0.58
HDAC7-227ENST00000548080 MEIG1Q5JSS6 88 aa11.4□□□□□ -0.58
HDAC7-227ENST00000548080 C2orf82Q6UX34 121 aa11.4□□□□□ -0.58
HDAC7-227ENST00000548080 LITAFQ99732 161 aa11.4□□□□□ -0.58
HDAC7-227ENST00000548080 DNAH5Q8TE73 4624 aa11.4□□□□□ -0.59
HDAC7-227ENST00000548080 ZNF561-AS1K7EIQ3 104 aa11.39□□□□□ -0.59
HDAC7-227ENST00000548080 BVES-AS1Q5T3Y7 98 aa11.39□□□□□ -0.59
HDAC7-227ENST00000548080 SNHG12Q9BXW3 62 aa11.39□□□□□ -0.59
HDAC7-227ENST00000548080 HIGD2BQ4VC39 106 aa11.38□□□□□ -0.59
HDAC7-227ENST00000548080 ADAMTSL4-AS1Q5T5F5 129 aa11.38□□□□□ -0.59
HDAC7-227ENST00000548080 CEND1Q8N111 149 aa11.38□□□□□ -0.59
HDAC7-227ENST00000548080 NTN5Q8WTR8 489 aaPredicted RBP11.38□□□□□ -0.59
HDAC7-227ENST00000548080 LINC00526Q96FQ7 95 aa11.38□□□□□ -0.59
HDAC7-227ENST00000548080 GVQW2A0A096LPI5 108 aaPredicted RBP11.38□□□□□ -0.59
HDAC7-227ENST00000548080 GCSHP23434 173 aa11.38□□□□□ -0.59
HDAC7-227ENST00000548080 BATFQ16520 125 aa11.38□□□□□ -0.59
HDAC7-227ENST00000548080 Q8N814 137 aa11.38□□□□□ -0.59
HDAC7-227ENST00000548080 SPANXDQ9BXN6 97 aa11.38□□□□□ -0.59
HDAC7-227ENST00000548080 SPANXCQ9NY87 97 aa11.38□□□□□ -0.59
HDAC7-227ENST00000548080 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-227ENST00000548080 SMIM13P0DJ93 91 aa11.37□□□□□ -0.59
HDAC7-227ENST00000548080 UNQ6190/PRO20217Q6UXQ8 127 aa11.37□□□□□ -0.59
HDAC7-227ENST00000548080 Q6ZVH6 145 aa11.37□□□□□ -0.59
HDAC7-227ENST00000548080 C2orf48Q96LS8 159 aa11.37□□□□□ -0.59
HDAC7-227ENST00000548080 A0A0U1RRA0 63 aa11.36□□□□□ -0.59
HDAC7-227ENST00000548080 USP17L23D6RBM5 183 aa11.36□□□□□ -0.59
HDAC7-227ENST00000548080 F8WDY8 70 aa11.36□□□□□ -0.59
HDAC7-227ENST00000548080 ERG28Q9UKR5 140 aa11.36□□□□□ -0.59
HDAC7-227ENST00000548080 LINC00158P58513 81 aa11.34□□□□□ -0.59
HDAC7-227ENST00000548080 C10orf25Q5T742 122 aa11.34□□□□□ -0.59
HDAC7-227ENST00000548080 CAMK2N2Q96S95 79 aa11.34□□□□□ -0.59
HDAC7-227ENST00000548080 FXYD2P54710 66 aa11.33□□□□□ -0.6
HDAC7-227ENST00000548080 MUSTN1Q8IVN3 82 aa11.33□□□□□ -0.6
HDAC7-227ENST00000548080 LRP1BQ9NZR2 4599 aa11.33□□□□□ -0.6
HDAC7-227ENST00000548080 IGLV5-52A0A0A0MRZ9 124 aa11.32□□□□□ -0.6
HDAC7-227ENST00000548080 IFITM1P13164 125 aa11.32□□□□□ -0.6
HDAC7-227ENST00000548080 PFN2P35080 140 aa11.32□□□□□ -0.6
HDAC7-227ENST00000548080 PTTG1IPP53801 180 aa11.32□□□□□ -0.6
HDAC7-227ENST00000548080 COX17Q14061 63 aa11.32□□□□□ -0.6
HDAC7-227ENST00000548080 DAND5Q8N907 189 aa11.32□□□□□ -0.6
HDAC7-227ENST00000548080 PGPEP1Q9NXJ5 209 aa11.32□□□□□ -0.6
HDAC7-227ENST00000548080 TRBV30A0A0K0K1B3 111 aa11.31□□□□□ -0.6
HDAC7-227ENST00000548080 LINC01620Q4KN68 170 aa11.31□□□□□ -0.6
HDAC7-227ENST00000548080 C9orf116Q5BN46 136 aaPredicted RBP11.31□□□□□ -0.6
HDAC7-227ENST00000548080 MIR7-3HGQ8N6C7 128 aa11.31□□□□□ -0.6
HDAC7-227ENST00000548080 LINC00308Q8TCZ7 52 aa11.31□□□□□ -0.6
HDAC7-227ENST00000548080 KRTAP10-1P60331 282 aa11.3□□□□□ -0.6
HDAC7-227ENST00000548080 RPL24P83731 157 aaKnown RBP11.3□□□□□ -0.6
HDAC7-227ENST00000548080 SYCNQ0VAF6 134 aa11.3□□□□□ -0.6
HDAC7-227ENST00000548080 COPS9Q8WXC6 57 aa11.3□□□□□ -0.6
HDAC7-227ENST00000548080 C6orf48Q9UBA6 75 aa11.3□□□□□ -0.6
HDAC7-227ENST00000548080 KIAA1109Q2LD37 5005 aa11.3□□□□□ -0.6
HDAC7-227ENST00000548080 TMEM238LA0A1B0GVL6 79 aa11.29□□□□□ -0.6
HDAC7-227ENST00000548080 A6NDN8 102 aa11.29□□□□□ -0.6
HDAC7-227ENST00000548080 A6NJY4 79 aa11.29□□□□□ -0.6
HDAC7-227ENST00000548080 NPC2P61916 151 aa11.29□□□□□ -0.6
HDAC7-227ENST00000548080 Q6ZRU5 148 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms