RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 SIGMAR1Q99720 223 aa11.39□□□□□ -0.59
CHMP1A-204ENST00000547687 ERG28Q9UKR5 140 aa11.39□□□□□ -0.59
CHMP1A-204ENST00000547687 DNAH1Q9P2D7 4330 aa11.39□□□□□ -0.59
CHMP1A-204ENST00000547687 F8W1H4 67 aa11.38□□□□□ -0.59
CHMP1A-204ENST00000547687 IFITM1P13164 125 aa11.38□□□□□ -0.59
CHMP1A-204ENST00000547687 NPC2P61916 151 aa11.38□□□□□ -0.59
CHMP1A-204ENST00000547687 LYRM7Q5U5X0 104 aa11.38□□□□□ -0.59
CHMP1A-204ENST00000547687 CKS1BP61024 79 aa11.38□□□□□ -0.59
CHMP1A-204ENST00000547687 Q6ZTC4 211 aa11.38□□□□□ -0.59
CHMP1A-204ENST00000547687 ALMS1Q8TCU4 4167 aa11.37□□□□□ -0.59
CHMP1A-204ENST00000547687 LINC00959A0A1B0GUT2 108 aa11.37□□□□□ -0.59
CHMP1A-204ENST00000547687 PSMB2P49721 201 aa11.37□□□□□ -0.59
CHMP1A-204ENST00000547687 DAND5Q8N907 189 aa11.37□□□□□ -0.59
CHMP1A-204ENST00000547687 IGHV3OR16-9A0A0B4J2B5 98 aa11.36□□□□□ -0.59
CHMP1A-204ENST00000547687 HERV-K104P63124 156 aa11.36□□□□□ -0.59
CHMP1A-204ENST00000547687 H7C2G1 150 aa11.36□□□□□ -0.59
CHMP1A-204ENST00000547687 COX7B2Q8TF08 81 aa11.36□□□□□ -0.59
CHMP1A-204ENST00000547687 SCGB1C2P0DMR2 95 aa11.35□□□□□ -0.59
CHMP1A-204ENST00000547687 NANOS2P60321 138 aaKnown RBP11.35□□□□□ -0.59
CHMP1A-204ENST00000547687 WFDC2Q14508 124 aa11.35□□□□□ -0.59
CHMP1A-204ENST00000547687 C11orf45Q8TAV5 145 aa11.35□□□□□ -0.59
CHMP1A-204ENST00000547687 LCE6AA0A183 80 aa11.35□□□□□ -0.59
CHMP1A-204ENST00000547687 MEIG1Q5JSS6 88 aa11.35□□□□□ -0.59
CHMP1A-204ENST00000547687 KMT2AQ03164 3969 aa11.34□□□□□ -0.59
CHMP1A-204ENST00000547687 A0A087WZ39 114 aa11.34□□□□□ -0.59
CHMP1A-204ENST00000547687 A0A0U1RRA0 63 aa11.34□□□□□ -0.59
CHMP1A-204ENST00000547687 SS18Q15532 418 aa11.34□□□□□ -0.59
CHMP1A-204ENST00000547687 MRPL23Q16540 153 aaKnown RBP11.34□□□□□ -0.59
CHMP1A-204ENST00000547687 Q1RN00 199 aa11.33□□□□□ -0.6
CHMP1A-204ENST00000547687 C5orf38Q86SI9 138 aa11.33□□□□□ -0.6
CHMP1A-204ENST00000547687 LINC00308Q8TCZ7 52 aa11.33□□□□□ -0.6
CHMP1A-204ENST00000547687 TOMM7Q9P0U1 55 aa11.33□□□□□ -0.6
CHMP1A-204ENST00000547687 PRO0461Q9UI25 63 aa11.33□□□□□ -0.6
CHMP1A-204ENST00000547687 TRBV20-1A0A075B6N2 111 aa11.33□□□□□ -0.6
CHMP1A-204ENST00000547687 ICOSQ9Y6W8 199 aa11.33□□□□□ -0.6
CHMP1A-204ENST00000547687 TCL1BO95988 128 aa11.32□□□□□ -0.6
CHMP1A-204ENST00000547687 COPS9Q8WXC6 57 aa11.31□□□□□ -0.6
CHMP1A-204ENST00000547687 XCL1P47992 114 aa11.31□□□□□ -0.6
CHMP1A-204ENST00000547687 CLPSL2Q6UWE3 100 aa11.31□□□□□ -0.6
CHMP1A-204ENST00000547687 SH2D6Q7Z4S9 175 aa11.31□□□□□ -0.6
CHMP1A-204ENST00000547687 LINC00269Q8N2A0 174 aa11.3□□□□□ -0.6
CHMP1A-204ENST00000547687 DEFB131BA0A096LNP1 70 aa11.29□□□□□ -0.6
CHMP1A-204ENST00000547687 TRBV30A0A0K0K1B3 111 aa11.28□□□□□ -0.6
CHMP1A-204ENST00000547687 SOSTDC1Q6X4U4 206 aa11.28□□□□□ -0.6
CHMP1A-204ENST00000547687 H3BNG1 76 aa11.28□□□□□ -0.6
CHMP1A-204ENST00000547687 ANGP03950 147 aaKnown RBP11.28□□□□□ -0.6
CHMP1A-204ENST00000547687 LELP1Q5T871 98 aa11.28□□□□□ -0.6
CHMP1A-204ENST00000547687 EPPK1P58107 5090 aaKnown RBP11.27□□□□□ -0.6
CHMP1A-204ENST00000547687 NUPR2A6NF83 97 aa11.27□□□□□ -0.61
CHMP1A-204ENST00000547687 ETDBQ3ZM63 59 aa11.27□□□□□ -0.61
CHMP1A-204ENST00000547687 Q8N3U1 123 aa11.27□□□□□ -0.61
CHMP1A-204ENST00000547687 TRIAP1O43715 76 aa11.26□□□□□ -0.61
CHMP1A-204ENST00000547687 RPL13AP40429 203 aaKnown RBP11.26□□□□□ -0.61
CHMP1A-204ENST00000547687 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
CHMP1A-204ENST00000547687 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
CHMP1A-204ENST00000547687 FRAS1Q86XX4 4008 aa11.25□□□□□ -0.61
CHMP1A-204ENST00000547687 REG3AQ06141 175 aa11.25□□□□□ -0.61
CHMP1A-204ENST00000547687 C6orf226Q5I0X4 101 aa11.25□□□□□ -0.61
CHMP1A-204ENST00000547687 PPDPFQ9H3Y8 114 aa11.25□□□□□ -0.61
CHMP1A-204ENST00000547687 LYPD5Q6UWN5 251 aa11.25□□□□□ -0.61
CHMP1A-204ENST00000547687 GAGE12HA6NDE8 117 aa11.24□□□□□ -0.61
CHMP1A-204ENST00000547687 LY6G6CO95867 125 aa11.24□□□□□ -0.61
CHMP1A-204ENST00000547687 CD164L2Q6UWJ8 174 aa11.24□□□□□ -0.61
CHMP1A-204ENST00000547687 LINC00158P58513 81 aa11.23□□□□□ -0.61
CHMP1A-204ENST00000547687 MIR7-3HGQ8N6C7 128 aa11.23□□□□□ -0.61
CHMP1A-204ENST00000547687 CHCHD10Q8WYQ3 142 aaPredicted RBP11.23□□□□□ -0.61
CHMP1A-204ENST00000547687 TRAV10A0A0B4J240 114 aa11.23□□□□□ -0.61
CHMP1A-204ENST00000547687 IBA57-AS1B1ANH7 110 aa11.23□□□□□ -0.61
CHMP1A-204ENST00000547687 COX6CP09669 75 aa11.23□□□□□ -0.61
CHMP1A-204ENST00000547687 ATXN8Q156A1 80 aa11.23□□□□□ -0.61
CHMP1A-204ENST00000547687 LINC00476Q8WZB0 136 aa11.23□□□□□ -0.61
CHMP1A-204ENST00000547687 KLK5Q9Y337 293 aaPredicted RBP11.23□□□□□ -0.61
CHMP1A-204ENST00000547687 Q8IZM0 81 aa11.22□□□□□ -0.61
CHMP1A-204ENST00000547687 VPS13DQ5THJ4 4388 aa11.22□□□□□ -0.61
CHMP1A-204ENST00000547687 IGLV10-54A0A075B6I4 117 aa11.21□□□□□ -0.61
CHMP1A-204ENST00000547687 COX7A2LO14548 114 aa11.21□□□□□ -0.61
CHMP1A-204ENST00000547687 J3QR89 54 aa11.2□□□□□ -0.62
CHMP1A-204ENST00000547687 PFN2P35080 140 aa11.19□□□□□ -0.62
CHMP1A-204ENST00000547687 C9JAW5 83 aa11.19□□□□□ -0.62
CHMP1A-204ENST00000547687 MALP21145 153 aa11.18□□□□□ -0.62
CHMP1A-204ENST00000547687 ESRGQ1W209 222 aa11.18□□□□□ -0.62
CHMP1A-204ENST00000547687 SLC25A20O43772 301 aa11.18□□□□□ -0.62
CHMP1A-204ENST00000547687 LINC01620Q4KN68 170 aa11.18□□□□□ -0.62
CHMP1A-204ENST00000547687 KLK12Q9UKR0 248 aa11.18□□□□□ -0.62
CHMP1A-204ENST00000547687 FOXI1Q12951 378 aa11.17□□□□□ -0.62
CHMP1A-204ENST00000547687 C2orf82Q6UX34 121 aa11.17□□□□□ -0.62
CHMP1A-204ENST00000547687 SND1-IT1Q9HBX3 110 aa11.17□□□□□ -0.62
CHMP1A-204ENST00000547687 KIAA0087Q14695 138 aa11.16□□□□□ -0.62
CHMP1A-204ENST00000547687 PRR34Q9NV39 138 aa11.16□□□□□ -0.62
CHMP1A-204ENST00000547687 CCL18P55774 89 aa11.16□□□□□ -0.62
CHMP1A-204ENST00000547687 TRAV13-2A0A0B4J235 113 aa11.15□□□□□ -0.62
CHMP1A-204ENST00000547687 TEN1Q86WV5 123 aa11.15□□□□□ -0.62
CHMP1A-204ENST00000547687 WFDC10BQ8IUB3 73 aa11.15□□□□□ -0.62
CHMP1A-204ENST00000547687 CLEC2BQ92478 149 aa11.15□□□□□ -0.62
CHMP1A-204ENST00000547687 M0QXV9 152 aa11.14□□□□□ -0.63
CHMP1A-204ENST00000547687 CXCL5P42830 114 aa11.14□□□□□ -0.63
CHMP1A-204ENST00000547687 ENHOQ6UWT2 76 aa11.14□□□□□ -0.63
CHMP1A-204ENST00000547687 C15orf53Q8NAA6 179 aa11.14□□□□□ -0.63
CHMP1A-204ENST00000547687 SS18L2Q9UHA2 77 aa11.14□□□□□ -0.63
CHMP1A-204ENST00000547687 APLNQ9ULZ1 77 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms