RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 GYPEP15421 78 aa11.88□□□□□ -0.51
RBFOX1-207ENST00000547338 LINC01561Q8N1V8 128 aa11.88□□□□□ -0.51
RBFOX1-207ENST00000547338 DAD1P61803 113 aa11.87□□□□□ -0.51
RBFOX1-207ENST00000547338 RBX1P62877 108 aa11.87□□□□□ -0.51
RBFOX1-207ENST00000547338 BIRC6Q9NR09 4857 aa11.87□□□□□ -0.51
RBFOX1-207ENST00000547338 LOC107984156A0A0G2JMH3 177 aa11.86□□□□□ -0.51
RBFOX1-207ENST00000547338 H3BMG7 143 aa11.86□□□□□ -0.51
RBFOX1-207ENST00000547338 J3QR89 54 aa11.86□□□□□ -0.51
RBFOX1-207ENST00000547338 PAX4O43316 350 aa11.86□□□□□ -0.51
RBFOX1-207ENST00000547338 GAGE6Q13070 117 aa11.86□□□□□ -0.51
RBFOX1-207ENST00000547338 ARL17AQ8IVW1 177 aa11.86□□□□□ -0.51
RBFOX1-207ENST00000547338 HTN3P15516 51 aa11.86□□□□□ -0.51
RBFOX1-207ENST00000547338 ZNF625Q96I27 306 aaPredicted RBP11.86□□□□□ -0.51
RBFOX1-207ENST00000547338 TRBV30A0A0K0K1B3 111 aa11.85□□□□□ -0.51
RBFOX1-207ENST00000547338 SCGB1C2P0DMR2 95 aa11.85□□□□□ -0.51
RBFOX1-207ENST00000547338 ADAMTSL4-AS1Q5T5F5 129 aa11.85□□□□□ -0.51
RBFOX1-207ENST00000547338 Q9H8V8 135 aa11.85□□□□□ -0.51
RBFOX1-207ENST00000547338 PRO0461Q9UI25 63 aa11.85□□□□□ -0.51
RBFOX1-207ENST00000547338 M0QXV9 152 aa11.84□□□□□ -0.51
RBFOX1-207ENST00000547338 ATP5G1P05496 136 aa11.84□□□□□ -0.51
RBFOX1-207ENST00000547338 A0A087WZ39 114 aa11.82□□□□□ -0.52
RBFOX1-207ENST00000547338 IGHV3OR16-9A0A0B4J2B5 98 aa11.82□□□□□ -0.52
RBFOX1-207ENST00000547338 PSMB2P49721 201 aa11.82□□□□□ -0.52
RBFOX1-207ENST00000547338 DNAH2Q9P225 4427 aa11.82□□□□□ -0.52
RBFOX1-207ENST00000547338 COX6CP09669 75 aa11.81□□□□□ -0.52
RBFOX1-207ENST00000547338 SS18Q15532 418 aa11.81□□□□□ -0.52
RBFOX1-207ENST00000547338 IGLV4-60A0A075B6I1 120 aa11.81□□□□□ -0.52
RBFOX1-207ENST00000547338 COX7B2Q8TF08 81 aa11.81□□□□□ -0.52
RBFOX1-207ENST00000547338 LINC00959A0A1B0GUT2 108 aa11.8□□□□□ -0.52
RBFOX1-207ENST00000547338 WFDC2Q14508 124 aa11.8□□□□□ -0.52
RBFOX1-207ENST00000547338 MRPL23Q16540 153 aaKnown RBP11.8□□□□□ -0.52
RBFOX1-207ENST00000547338 LINC00308Q8TCZ7 52 aa11.8□□□□□ -0.52
RBFOX1-207ENST00000547338 LINC01600Q96MT4 127 aa11.79□□□□□ -0.52
RBFOX1-207ENST00000547338 EIF4EBP3O60516 100 aaPredicted RBP11.78□□□□□ -0.52
RBFOX1-207ENST00000547338 TCL1BO95988 128 aa11.78□□□□□ -0.52
RBFOX1-207ENST00000547338 Q1RN00 199 aa11.78□□□□□ -0.52
RBFOX1-207ENST00000547338 MEIG1Q5JSS6 88 aa11.78□□□□□ -0.52
RBFOX1-207ENST00000547338 VPS25Q9BRG1 176 aa11.78□□□□□ -0.52
RBFOX1-207ENST00000547338 DNAH17Q9UFH2 4485 aa11.78□□□□□ -0.52
RBFOX1-207ENST00000547338 FAT2Q9NYQ8 4349 aa11.78□□□□□ -0.52
RBFOX1-207ENST00000547338 HECTD4Q9Y4D8 3996 aa11.78□□□□□ -0.52
RBFOX1-207ENST00000547338 TMEM262E9PQX1 116 aa11.77□□□□□ -0.52
RBFOX1-207ENST00000547338 ATXN8Q156A1 80 aa11.77□□□□□ -0.52
RBFOX1-207ENST00000547338 IBA57-AS1B1ANH7 110 aa11.76□□□□□ -0.53
RBFOX1-207ENST00000547338 H3BNG1 76 aa11.76□□□□□ -0.53
RBFOX1-207ENST00000547338 RNF151Q2KHN1 245 aa11.76□□□□□ -0.53
RBFOX1-207ENST00000547338 ICOSQ9Y6W8 199 aa11.75□□□□□ -0.53
RBFOX1-207ENST00000547338 C15orf53Q8NAA6 179 aa11.74□□□□□ -0.53
RBFOX1-207ENST00000547338 ETDBQ3ZM63 59 aa11.73□□□□□ -0.53
RBFOX1-207ENST00000547338 LELP1Q5T871 98 aa11.73□□□□□ -0.53
RBFOX1-207ENST00000547338 Q8IZM0 81 aa11.72□□□□□ -0.53
RBFOX1-207ENST00000547338 CD164L2Q6UWJ8 174 aa11.71□□□□□ -0.53
RBFOX1-207ENST00000547338 Q6ZR54 194 aa11.71□□□□□ -0.53
RBFOX1-207ENST00000547338 TRAV13-2A0A0B4J235 113 aa11.7□□□□□ -0.54
RBFOX1-207ENST00000547338 H7C2G1 150 aa11.7□□□□□ -0.54
RBFOX1-207ENST00000547338 CXCL5P42830 114 aa11.7□□□□□ -0.54
RBFOX1-207ENST00000547338 TEN1Q86WV5 123 aa11.7□□□□□ -0.54
RBFOX1-207ENST00000547338 IGKV3OR2-268A0A0C4DH90 116 aa11.7□□□□□ -0.54
RBFOX1-207ENST00000547338 M0R2N4 97 aa11.7□□□□□ -0.54
RBFOX1-207ENST00000547338 TRIAP1O43715 76 aa11.7□□□□□ -0.54
RBFOX1-207ENST00000547338 RPL13AP40429 203 aaKnown RBP11.7□□□□□ -0.54
RBFOX1-207ENST00000547338 SMCPP49901 116 aaPredicted RBP11.7□□□□□ -0.54
RBFOX1-207ENST00000547338 C6orf226Q5I0X4 101 aa11.7□□□□□ -0.54
RBFOX1-207ENST00000547338 UBE2DNLQ8IWF7 75 aa11.7□□□□□ -0.54
RBFOX1-207ENST00000547338 PPDPFLQ8WWR9 84 aa11.69□□□□□ -0.54
RBFOX1-207ENST00000547338 TOMM7Q9P0U1 55 aa11.69□□□□□ -0.54
RBFOX1-207ENST00000547338 SLC25A20O43772 301 aa11.68□□□□□ -0.54
RBFOX1-207ENST00000547338 FOXI1Q12951 378 aa11.68□□□□□ -0.54
RBFOX1-207ENST00000547338 LINC01620Q4KN68 170 aa11.68□□□□□ -0.54
RBFOX1-207ENST00000547338 TRBV10-2A0A0K0K1G8 114 aa11.67□□□□□ -0.54
RBFOX1-207ENST00000547338 RTL8CO15255 209 aa11.67□□□□□ -0.54
RBFOX1-207ENST00000547338 NPC2P61916 151 aa11.67□□□□□ -0.54
RBFOX1-207ENST00000547338 C5orf38Q86SI9 138 aa11.67□□□□□ -0.54
RBFOX1-207ENST00000547338 DAND5Q8N907 189 aa11.67□□□□□ -0.54
RBFOX1-207ENST00000547338 LINC00588Q9Y4M8 146 aa11.67□□□□□ -0.54
RBFOX1-207ENST00000547338 COX17Q14061 63 aa11.66□□□□□ -0.54
RBFOX1-207ENST00000547338 SOSTDC1Q6X4U4 206 aa11.66□□□□□ -0.54
RBFOX1-207ENST00000547338 PKD1P98161 4303 aa11.66□□□□□ -0.54
RBFOX1-207ENST00000547338 H3BT86 120 aa11.65□□□□□ -0.54
RBFOX1-207ENST00000547338 COX7A2LO14548 114 aa11.65□□□□□ -0.54
RBFOX1-207ENST00000547338 REG3AQ06141 175 aa11.65□□□□□ -0.54
RBFOX1-207ENST00000547338 A0A096LPF7 62 aa11.65□□□□□ -0.55
RBFOX1-207ENST00000547338 C9JAW5 83 aa11.65□□□□□ -0.55
RBFOX1-207ENST00000547338 LST1O00453 97 aa11.65□□□□□ -0.55
RBFOX1-207ENST00000547338 XCL1P47992 114 aa11.65□□□□□ -0.55
RBFOX1-207ENST00000547338 LINC00158P58513 81 aa11.65□□□□□ -0.55
RBFOX1-207ENST00000547338 LINC00269Q8N2A0 174 aa11.65□□□□□ -0.55
RBFOX1-207ENST00000547338 MIR7-3HGQ8N6C7 128 aa11.65□□□□□ -0.55
RBFOX1-207ENST00000547338 ANKRD29Q8N6D5 301 aa11.65□□□□□ -0.55
RBFOX1-207ENST00000547338 ANGP03950 147 aaKnown RBP11.64□□□□□ -0.55
RBFOX1-207ENST00000547338 PKHD1P08F94 4074 aa11.64□□□□□ -0.55
RBFOX1-207ENST00000547338 CHCHD10Q8WYQ3 142 aaPredicted RBP11.63□□□□□ -0.55
RBFOX1-207ENST00000547338 A0A0U1RRA0 63 aa11.62□□□□□ -0.55
RBFOX1-207ENST00000547338 A0A1B0GVY2 172 aa11.62□□□□□ -0.55
RBFOX1-207ENST00000547338 ESRGQ1W209 222 aa11.62□□□□□ -0.55
RBFOX1-207ENST00000547338 SND1-IT1Q9HBX3 110 aa11.62□□□□□ -0.55
RBFOX1-207ENST00000547338 PRR34Q9NV39 138 aa11.62□□□□□ -0.55
RBFOX1-207ENST00000547338 TRAV8-4A0A0B4J246 113 aa11.61□□□□□ -0.55
RBFOX1-207ENST00000547338 RPL28P46779 137 aaKnown RBP11.61□□□□□ -0.55
RBFOX1-207ENST00000547338 CKS1BP61024 79 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms