RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 Q8IZM0 81 aa8.73□□□□□ -1.01
COL2A1-209ENST00000546974 CKS1BP61024 79 aa8.72□□□□□ -1.01
COL2A1-209ENST00000546974 HERVK_113P63121 156 aa8.72□□□□□ -1.01
COL2A1-209ENST00000546974 UBE2BP63146 152 aa8.72□□□□□ -1.01
COL2A1-209ENST00000546974 C6orf226Q5I0X4 101 aa8.72□□□□□ -1.01
COL2A1-209ENST00000546974 TIMM17AQ99595 171 aa8.72□□□□□ -1.01
COL2A1-209ENST00000546974 TOMM7Q9P0U1 55 aa8.72□□□□□ -1.01
COL2A1-209ENST00000546974 LPAP08519 4548 aa8.72□□□□□ -1.01
COL2A1-209ENST00000546974 TOMM6Q96B49 74 aa8.71□□□□□ -1.02
COL2A1-209ENST00000546974 ALKBH7Q9BT30 221 aaPredicted RBP8.7□□□□□ -1.02
COL2A1-209ENST00000546974 CDKN2A-AS1Q9UH64 79 aa8.7□□□□□ -1.02
COL2A1-209ENST00000546974 TRAV9-1A0A075B6T8 112 aa8.69□□□□□ -1.02
COL2A1-209ENST00000546974 KIAA1644Q3SXP7 199 aa8.69□□□□□ -1.02
COL2A1-209ENST00000546974 PRR26Q8N8Z3 221 aa8.69□□□□□ -1.02
COL2A1-209ENST00000546974 GEMIN7Q9H840 131 aaKnown RBP8.69□□□□□ -1.02
COL2A1-209ENST00000546974 ERASQ7Z444 233 aa8.68□□□□□ -1.02
COL2A1-209ENST00000546974 IGLV1-50A0A075B6I6 118 aa8.67□□□□□ -1.02
COL2A1-209ENST00000546974 F8VRH5 84 aa8.67□□□□□ -1.02
COL2A1-209ENST00000546974 LINC00469Q8N7U9 141 aa8.67□□□□□ -1.02
COL2A1-209ENST00000546974 SCGB3A1Q96QR1 104 aa8.67□□□□□ -1.02
COL2A1-209ENST00000546974 C22orf24Q9Y442 160 aa8.67□□□□□ -1.02
COL2A1-209ENST00000546974 LINC01549A6NIU2 74 aa8.66□□□□□ -1.02
COL2A1-209ENST00000546974 KRTAP1-4P0C5Y4 121 aa8.66□□□□□ -1.02
COL2A1-209ENST00000546974 CXCL5P42830 114 aa8.66□□□□□ -1.02
COL2A1-209ENST00000546974 TINCRA0A1B0GVN0 87 aa8.65□□□□□ -1.02
COL2A1-209ENST00000546974 LINC01546A6NGU7 62 aa8.65□□□□□ -1.02
COL2A1-209ENST00000546974 NUPR1O60356 82 aa8.65□□□□□ -1.02
COL2A1-209ENST00000546974 RHEBQ15382 184 aa8.65□□□□□ -1.02
COL2A1-209ENST00000546974 LBHQ53QV2 105 aaPredicted RBP8.65□□□□□ -1.02
COL2A1-209ENST00000546974 GNB1LQ9BYB4 327 aa8.65□□□□□ -1.02
COL2A1-209ENST00000546974 XAGE1AQ9HD64 81 aa8.65□□□□□ -1.02
COL2A1-209ENST00000546974 ZNF861PO60384 105 aa8.64□□□□□ -1.03
COL2A1-209ENST00000546974 APOC3P02656 99 aa8.64□□□□□ -1.03
COL2A1-209ENST00000546974 S100PP25815 95 aa8.64□□□□□ -1.03
COL2A1-209ENST00000546974 PDZD11Q5EBL8 140 aa8.64□□□□□ -1.03
COL2A1-209ENST00000546974 SVBPQ8N300 66 aa8.64□□□□□ -1.03
COL2A1-209ENST00000546974 IGLV5-45A0A087WSX0 123 aa8.63□□□□□ -1.03
COL2A1-209ENST00000546974 SMIM1B2RUZ4 78 aa8.63□□□□□ -1.03
COL2A1-209ENST00000546974 TP73-AS1Q9UF72 201 aa8.63□□□□□ -1.03
COL2A1-209ENST00000546974 RPL13AP40429 203 aaKnown RBP8.62□□□□□ -1.03
COL2A1-209ENST00000546974 COX19Q49B96 90 aa8.62□□□□□ -1.03
COL2A1-209ENST00000546974 COX7B2Q8TF08 81 aa8.62□□□□□ -1.03
COL2A1-209ENST00000546974 YPEL4Q96NS1 127 aa8.62□□□□□ -1.03
COL2A1-209ENST00000546974 CST9LQ9H4G1 147 aa8.62□□□□□ -1.03
COL2A1-209ENST00000546974 SNAPINO95295 136 aa8.61□□□□□ -1.03
COL2A1-209ENST00000546974 MRPL55Q7Z7F7 128 aaKnown RBP8.61□□□□□ -1.03
COL2A1-209ENST00000546974 PMVKQ15126 192 aa8.6□□□□□ -1.03
COL2A1-209ENST00000546974 FA2HQ7L5A8 372 aa8.59□□□□□ -1.03
COL2A1-209ENST00000546974 MRPL18Q9H0U6 180 aaKnown RBP8.59□□□□□ -1.03
COL2A1-209ENST00000546974 SMCO4Q9NRQ5 59 aa8.59□□□□□ -1.03
COL2A1-209ENST00000546974 SPINK8P0C7L1 97 aa8.58□□□□□ -1.04
COL2A1-209ENST00000546974 FABP9Q0Z7S8 132 aa8.58□□□□□ -1.04
COL2A1-209ENST00000546974 RPS10P5Q9NQ39 176 aa8.58□□□□□ -1.04
COL2A1-209ENST00000546974 BCE1O60756 84 aa8.57□□□□□ -1.04
COL2A1-209ENST00000546974 ATP6V1G1O75348 118 aa8.57□□□□□ -1.04
COL2A1-209ENST00000546974 LINC00167Q96N53 147 aa8.57□□□□□ -1.04
COL2A1-209ENST00000546974 IGLV5-37A0A075B6J1 123 aa8.56□□□□□ -1.04
COL2A1-209ENST00000546974 H3BRM9 83 aa8.56□□□□□ -1.04
COL2A1-209ENST00000546974 RPL28P46779 137 aaKnown RBP8.56□□□□□ -1.04
COL2A1-209ENST00000546974 RAB5BP61020 215 aa8.55□□□□□ -1.04
COL2A1-209ENST00000546974 RPL37AP8A6NKH3 93 aa8.54□□□□□ -1.04
COL2A1-209ENST00000546974 ATP5LO75964 103 aa8.54□□□□□ -1.04
COL2A1-209ENST00000546974 IGLC3P0DOY3 106 aa8.54□□□□□ -1.04
COL2A1-209ENST00000546974 IGLV5-39A0A0G2JS06 123 aa8.53□□□□□ -1.04
COL2A1-209ENST00000546974 S100A1P23297 94 aa8.53□□□□□ -1.04
COL2A1-209ENST00000546974 CBLN2Q8IUK8 224 aa8.53□□□□□ -1.04
COL2A1-209ENST00000546974 A0A096LNJ9 63 aa8.52□□□□□ -1.05
COL2A1-209ENST00000546974 GAGE10A6NGK3 116 aa8.52□□□□□ -1.05
COL2A1-209ENST00000546974 NKAPP1Q8N9T2 125 aa8.52□□□□□ -1.05
COL2A1-209ENST00000546974 LINC00614P0C842 121 aa8.51□□□□□ -1.05
COL2A1-209ENST00000546974 NDUFA6P56556 154 aa8.51□□□□□ -1.05
COL2A1-209ENST00000546974 C18orf32Q8TCD1 76 aa8.51□□□□□ -1.05
COL2A1-209ENST00000546974 URB1-AS1Q96HZ7 61 aa8.51□□□□□ -1.05
COL2A1-209ENST00000546974 TRAPPC1Q9Y5R8 145 aa8.51□□□□□ -1.05
COL2A1-209ENST00000546974 A0A087X002 238 aa8.5□□□□□ -1.05
COL2A1-209ENST00000546974 CRYGAP11844 174 aa8.5□□□□□ -1.05
COL2A1-209ENST00000546974 ZNF22P17026 224 aaPredicted RBP8.5□□□□□ -1.05
COL2A1-209ENST00000546974 PRR4Q16378 134 aa8.5□□□□□ -1.05
COL2A1-209ENST00000546974 COLCA2A8K830 154 aa8.49□□□□□ -1.05
COL2A1-209ENST00000546974 SCO1O75880 301 aa8.49□□□□□ -1.05
COL2A1-209ENST00000546974 HBDP02042 147 aa8.49□□□□□ -1.05
COL2A1-209ENST00000546974 PFN2P35080 140 aa8.49□□□□□ -1.05
COL2A1-209ENST00000546974 KRTAP13-1Q8IUC0 172 aa8.49□□□□□ -1.05
COL2A1-209ENST00000546974 UBE2AP49459 152 aa8.48□□□□□ -1.05
COL2A1-209ENST00000546974 COX17Q14061 63 aa8.48□□□□□ -1.05
COL2A1-209ENST00000546974 TYMSOSQ8TAI1 123 aa8.48□□□□□ -1.05
COL2A1-209ENST00000546974 MUC2Q02817 5179 aa8.48□□□□□ -1.05
COL2A1-209ENST00000546974 ERG28Q9UKR5 140 aa8.47□□□□□ -1.05
COL2A1-209ENST00000546974 IGKV2-28A0A075B6P5 120 aa8.46□□□□□ -1.06
COL2A1-209ENST00000546974 TSPAN13O95857 204 aa8.46□□□□□ -1.06
COL2A1-209ENST00000546974 IGKV2D-28P01615 120 aa8.46□□□□□ -1.06
COL2A1-209ENST00000546974 VPREB1P12018 145 aa8.46□□□□□ -1.06
COL2A1-209ENST00000546974 RPL24P83731 157 aaKnown RBP8.46□□□□□ -1.06
COL2A1-209ENST00000546974 PMCHL1Q16048 86 aa8.46□□□□□ -1.06
COL2A1-209ENST00000546974 SFTA2Q6UW10 78 aa8.46□□□□□ -1.06
COL2A1-209ENST00000546974 SND1-IT1Q9HBX3 110 aa8.46□□□□□ -1.06
COL2A1-209ENST00000546974 C11orf86A6NJI1 115 aa8.45□□□□□ -1.06
COL2A1-209ENST00000546974 BAGE3Q86Y29 109 aa8.45□□□□□ -1.06
COL2A1-209ENST00000546974 FAM229BQ4G0N7 80 aa8.44□□□□□ -1.06
COL2A1-209ENST00000546974 TMEM170BQ5T4T1 132 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms