RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 RNF151Q2KHN1 245 aa6.38□□□□□ -1.39
CHFR-220ENST00000541817 OCIAD2Q56VL3 154 aa6.38□□□□□ -1.39
CHFR-220ENST00000541817 SPANXB1Q9NS25 103 aaPredicted RBP6.38□□□□□ -1.39
CHFR-220ENST00000541817 SPANXA1Q9NS26 97 aa6.38□□□□□ -1.39
CHFR-220ENST00000541817 MRPL16Q9NX20 251 aaKnown RBP6.38□□□□□ -1.39
CHFR-220ENST00000541817 A0A1B0GWB2 263 aa6.37□□□□□ -1.39
CHFR-220ENST00000541817 TMEM223A0PJW6 202 aa6.37□□□□□ -1.39
CHFR-220ENST00000541817 J3QQQ9 107 aa6.37□□□□□ -1.39
CHFR-220ENST00000541817 C11orf72Q8NBR9 251 aa6.37□□□□□ -1.39
CHFR-220ENST00000541817 OPRPNQ99935 248 aaPredicted RBP6.37□□□□□ -1.39
CHFR-220ENST00000541817 A0A0J9YXV3 536 aa6.36□□□□□ -1.39
CHFR-220ENST00000541817 ZNF22P17026 224 aaPredicted RBP6.36□□□□□ -1.39
CHFR-220ENST00000541817 SMAGPQ0VAQ4 97 aa6.36□□□□□ -1.39
CHFR-220ENST00000541817 LYRM7Q5U5X0 104 aa6.36□□□□□ -1.39
CHFR-220ENST00000541817 AMELXQ99217 191 aa6.36□□□□□ -1.39
CHFR-220ENST00000541817 TRGV1A0A0A0MS02 117 aa6.35□□□□□ -1.39
CHFR-220ENST00000541817 DGAT2L7PQ6IED9 249 aa6.35□□□□□ -1.39
CHFR-220ENST00000541817 CFAP161Q6P656 301 aa6.35□□□□□ -1.39
CHFR-220ENST00000541817 Q6ZRU5 148 aa6.35□□□□□ -1.39
CHFR-220ENST00000541817 SLC25A29Q8N8R3 303 aa6.35□□□□□ -1.39
CHFR-220ENST00000541817 VPS25Q9BRG1 176 aa6.35□□□□□ -1.39
CHFR-220ENST00000541817 TINCRA0A1B0GVN0 87 aa6.34□□□□□ -1.39
CHFR-220ENST00000541817 F8W1H4 67 aa6.34□□□□□ -1.39
CHFR-220ENST00000541817 GYPEP15421 78 aa6.34□□□□□ -1.39
CHFR-220ENST00000541817 RPL36AP83881 106 aaKnown RBP6.34□□□□□ -1.39
CHFR-220ENST00000541817 MRPL23Q16540 153 aaKnown RBP6.34□□□□□ -1.39
CHFR-220ENST00000541817 C10orf126Q8N4M7 172 aa6.34□□□□□ -1.39
CHFR-220ENST00000541817 RPL36ALQ969Q0 106 aaKnown RBP6.34□□□□□ -1.39
CHFR-220ENST00000541817 CHCHD7Q9BUK0 85 aa6.34□□□□□ -1.39
CHFR-220ENST00000541817 TIMM21Q9BVV7 248 aa6.34□□□□□ -1.39
CHFR-220ENST00000541817 TRAV4A0A0B4J268 109 aa6.33□□□□□ -1.4
CHFR-220ENST00000541817 TRBV10-1A0A0K0K1A3 114 aa6.33□□□□□ -1.4
CHFR-220ENST00000541817 IBA57-AS1B1ANH7 110 aa6.33□□□□□ -1.4
CHFR-220ENST00000541817 TMEM238C9JI98 176 aa6.33□□□□□ -1.4
CHFR-220ENST00000541817 APOMO95445 188 aa6.33□□□□□ -1.4
CHFR-220ENST00000541817 IGHV3-30P01768 117 aa6.33□□□□□ -1.4
CHFR-220ENST00000541817 IGHV3-33P01772 117 aa6.33□□□□□ -1.4
CHFR-220ENST00000541817 IGHV3-30-3P0DP02 117 aa6.33□□□□□ -1.4
CHFR-220ENST00000541817 IGHV3-30-5P0DP03 117 aa6.33□□□□□ -1.4
CHFR-220ENST00000541817 UBE2D1P51668 147 aa6.33□□□□□ -1.4
CHFR-220ENST00000541817 TSPEAR-AS2P59090 65 aa6.33□□□□□ -1.4
CHFR-220ENST00000541817 MRPS36P82909 103 aaKnown RBP6.33□□□□□ -1.4
CHFR-220ENST00000541817 LCE2AQ5TA79 106 aaPredicted RBP6.33□□□□□ -1.4
CHFR-220ENST00000541817 GEMIN7Q9H840 131 aaKnown RBP6.33□□□□□ -1.4
CHFR-220ENST00000541817 UBE2D4Q9Y2X8 147 aa6.33□□□□□ -1.4
CHFR-220ENST00000541817 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.32□□□□□ -1.4
CHFR-220ENST00000541817 IGHV3-38A0A0C4DH36 116 aa6.32□□□□□ -1.4
CHFR-220ENST00000541817 IGKV2-29A2NJV5 120 aaPredicted RBP6.32□□□□□ -1.4
CHFR-220ENST00000541817 K7EQD1 137 aa6.32□□□□□ -1.4
CHFR-220ENST00000541817 RPL24P83731 157 aaKnown RBP6.32□□□□□ -1.4
CHFR-220ENST00000541817 PRO0255Q9UI72 69 aa6.32□□□□□ -1.4
CHFR-220ENST00000541817 IGHV3-64A0A075B6Q5 118 aa6.31□□□□□ -1.4
CHFR-220ENST00000541817 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.31□□□□□ -1.4
CHFR-220ENST00000541817 IGHV1-58A0A0C4DH39 117 aa6.31□□□□□ -1.4
CHFR-220ENST00000541817 J3QR89 54 aa6.31□□□□□ -1.4
CHFR-220ENST00000541817 TIRAPP58753 221 aa6.31□□□□□ -1.4
CHFR-220ENST00000541817 DAZ2Q13117 558 aaKnown RBP6.31□□□□□ -1.4
CHFR-220ENST00000541817 FHL2Q14192 279 aa6.31□□□□□ -1.4
CHFR-220ENST00000541817 GAGE13Q4V321 117 aa6.31□□□□□ -1.4
CHFR-220ENST00000541817 DAZ4Q86SG3 579 aaKnown RBP6.31□□□□□ -1.4
CHFR-220ENST00000541817 DAZ3Q9NR90 486 aaKnown RBP6.31□□□□□ -1.4
CHFR-220ENST00000541817 LOC107984156A0A0G2JMH3 177 aa6.3□□□□□ -1.4
CHFR-220ENST00000541817 TSPAN13O95857 204 aa6.3□□□□□ -1.4
CHFR-220ENST00000541817 SCGB1A1P11684 91 aa6.3□□□□□ -1.4
CHFR-220ENST00000541817 ARL17AQ8IVW1 177 aa6.3□□□□□ -1.4
CHFR-220ENST00000541817 PRO1854Q9UHT4 67 aa6.3□□□□□ -1.4
CHFR-220ENST00000541817 MUC2Q02817 5179 aa6.3□□□□□ -1.4
CHFR-220ENST00000541817 A0A0J9YXY3 114 aa6.29□□□□□ -1.4
CHFR-220ENST00000541817 LOC100131303A0A0U1RQF7 123 aa6.29□□□□□ -1.4
CHFR-220ENST00000541817 SCGB1C2P0DMR2 95 aa6.29□□□□□ -1.4
CHFR-220ENST00000541817 PSMB2P49721 201 aa6.29□□□□□ -1.4
CHFR-220ENST00000541817 HERVK_113P63121 156 aa6.29□□□□□ -1.4
CHFR-220ENST00000541817 RNASE13Q5GAN3 156 aaKnown RBP6.29□□□□□ -1.4
CHFR-220ENST00000541817 Q6ZUT4 128 aa6.29□□□□□ -1.4
CHFR-220ENST00000541817 MUSTN1Q8IVN3 82 aa6.29□□□□□ -1.4
CHFR-220ENST00000541817 Q8N3U1 123 aa6.29□□□□□ -1.4
CHFR-220ENST00000541817 CRCT1Q9UGL9 99 aa6.29□□□□□ -1.4
CHFR-220ENST00000541817 TRBV20-1A0A075B6N2 111 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 A0A0B4J2C4 111 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 A4D1N5 150 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 GAGE12JA6NER3 117 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 H3BMG7 143 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 UBE2L6O14933 153 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 CFC1BP0CG36 223 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 CFC1P0CG37 223 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 UBE2D3P61077 147 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 UBE2D2P62837 147 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 GAGE4Q13068 117 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 GAGE5Q13069 117 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 FAM104AQ969W3 186 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 TMEM101Q96IK0 257 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 Q9UF83 564 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 NDUFA12Q9UI09 145 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 ERG28Q9UKR5 140 aa6.28□□□□□ -1.4
CHFR-220ENST00000541817 TRAV8-3A0A0A6YYJ7 113 aa6.27□□□□□ -1.41
CHFR-220ENST00000541817 TRGV4A0A0C4DH28 118 aa6.27□□□□□ -1.41
CHFR-220ENST00000541817 H7C423 109 aa6.27□□□□□ -1.41
CHFR-220ENST00000541817 TIMM17BO60830 172 aa6.27□□□□□ -1.41
CHFR-220ENST00000541817 SPINK8P0C7L1 97 aa6.27□□□□□ -1.41
CHFR-220ENST00000541817 CIRBPQ14011 172 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms