RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 DEFB104AQ8WTQ1 72 aa4.16□□□□□ -1.74
SNHG1-211ENST00000539921 PRR15LQ9BU68 103 aa4.16□□□□□ -1.74
SNHG1-211ENST00000539921 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
SNHG1-211ENST00000539921 ZNF318Q5VUA4 2279 aa4.16□□□□□ -1.74
SNHG1-211ENST00000539921 FAM186AA6NE01 2351 aa4.16□□□□□ -1.74
SNHG1-211ENST00000539921 TRIOO75962 3097 aa4.15□□□□□ -1.74
SNHG1-211ENST00000539921 IGHV3-73A0A0B4J1V6 119 aa4.15□□□□□ -1.75
SNHG1-211ENST00000539921 M0R2N4 97 aa4.15□□□□□ -1.75
SNHG1-211ENST00000539921 IGHV3-11P01762 117 aa4.15□□□□□ -1.75
SNHG1-211ENST00000539921 ZFP36P26651 326 aaKnown RBP4.15□□□□□ -1.75
SNHG1-211ENST00000539921 CNBPP62633 177 aaKnown RBP4.15□□□□□ -1.75
SNHG1-211ENST00000539921 HIGD2BQ4VC39 106 aa4.15□□□□□ -1.75
SNHG1-211ENST00000539921 SEM1Q6ZVN7 128 aa4.15□□□□□ -1.75
SNHG1-211ENST00000539921 MUC6Q6W4X9 2439 aa4.14□□□□□ -1.75
SNHG1-211ENST00000539921 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-211ENST00000539921 MOBPQ13875 183 aa4.14□□□□□ -1.75
SNHG1-211ENST00000539921 Q6ZQY7 126 aa4.14□□□□□ -1.75
SNHG1-211ENST00000539921 C5orf56Q8N8D9 126 aa4.14□□□□□ -1.75
SNHG1-211ENST00000539921 LINC01006Q8NI28 216 aa4.14□□□□□ -1.75
SNHG1-211ENST00000539921 TECTAO75443 2155 aa4.13□□□□□ -1.75
SNHG1-211ENST00000539921 H0Y9J4 135 aa4.13□□□□□ -1.75
SNHG1-211ENST00000539921 LINC00313P59037 77 aa4.13□□□□□ -1.75
SNHG1-211ENST00000539921 SMIM29Q86T20 159 aa4.13□□□□□ -1.75
SNHG1-211ENST00000539921 LINC00612Q8N6U2 182 aa4.12□□□□□ -1.75
SNHG1-211ENST00000539921 ZDBF2Q9HCK1 2354 aa4.12□□□□□ -1.75
SNHG1-211ENST00000539921 WDR87Q6ZQQ6 2873 aa4.12□□□□□ -1.75
SNHG1-211ENST00000539921 WNK2Q9Y3S1 2297 aa4.11□□□□□ -1.75
SNHG1-211ENST00000539921 PIEZO1Q92508 2521 aa4.11□□□□□ -1.75
SNHG1-211ENST00000539921 IGLV5-48A0A075B6I7 105 aa4.11□□□□□ -1.75
SNHG1-211ENST00000539921 A8MU10 97 aa4.11□□□□□ -1.75
SNHG1-211ENST00000539921 SPINK13Q1W4C9 94 aa4.11□□□□□ -1.75
SNHG1-211ENST00000539921 Q6ZSN1 163 aa4.11□□□□□ -1.75
SNHG1-211ENST00000539921 SCXQ7RTU7 201 aa4.11□□□□□ -1.75
SNHG1-211ENST00000539921 NOTCH2NLQ7Z3S9 236 aa4.11□□□□□ -1.75
SNHG1-211ENST00000539921 TOMM7Q9P0U1 55 aa4.11□□□□□ -1.75
SNHG1-211ENST00000539921 FAM215AQ9Y5M1 114 aa4.11□□□□□ -1.75
SNHG1-211ENST00000539921 URB1O60287 2271 aaKnown RBP4.11□□□□□ -1.75
SNHG1-211ENST00000539921 PTPRQQ9UMZ3 2332 aa4.11□□□□□ -1.75
SNHG1-211ENST00000539921 WDFY4Q6ZS81 3184 aa4.1□□□□□ -1.75
SNHG1-211ENST00000539921 LRCOL1A6NCL2 159 aa4.1□□□□□ -1.75
SNHG1-211ENST00000539921 G3V318 75 aa4.1□□□□□ -1.75
SNHG1-211ENST00000539921 PROK1P58294 105 aa4.1□□□□□ -1.75
SNHG1-211ENST00000539921 DEFB1P60022 68 aa4.1□□□□□ -1.75
SNHG1-211ENST00000539921 WFDC10AQ9H1F0 79 aa4.1□□□□□ -1.75
SNHG1-211ENST00000539921 CACNA1HO95180 2353 aa4.1□□□□□ -1.75
SNHG1-211ENST00000539921 MYO15AQ9UKN7 3530 aa4.09□□□□□ -1.75
SNHG1-211ENST00000539921 ABCA4P78363 2273 aa4.09□□□□□ -1.75
SNHG1-211ENST00000539921 GVQW2A0A096LPI5 108 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-211ENST00000539921 A0A1B0GUV1 79 aa4.09□□□□□ -1.75
SNHG1-211ENST00000539921 DSCR9P59020 149 aa4.09□□□□□ -1.75
SNHG1-211ENST00000539921 C18orf65Q6ZTR6 163 aa4.09□□□□□ -1.75
SNHG1-211ENST00000539921 A0A0J9YWU9 116 aa4.08□□□□□ -1.76
SNHG1-211ENST00000539921 LINC00959A0A1B0GUT2 108 aa4.08□□□□□ -1.76
SNHG1-211ENST00000539921 INSP01308 110 aa4.08□□□□□ -1.76
SNHG1-211ENST00000539921 FBXL19-AS1Q494R0 122 aa4.08□□□□□ -1.76
SNHG1-211ENST00000539921 C10orf25Q5T742 122 aa4.08□□□□□ -1.76
SNHG1-211ENST00000539921 TMEM105Q8N8V8 129 aa4.08□□□□□ -1.76
SNHG1-211ENST00000539921 C9orf163Q8N9P6 203 aa4.08□□□□□ -1.76
SNHG1-211ENST00000539921 SPRR4Q96PI1 79 aa4.08□□□□□ -1.76
SNHG1-211ENST00000539921 FAM30AQ9NZY2 134 aa4.08□□□□□ -1.76
SNHG1-211ENST00000539921 IGLV7-46A0A075B6I9 117 aa4.07□□□□□ -1.76
SNHG1-211ENST00000539921 ODF3L2Q3SX64 289 aa4.07□□□□□ -1.76
SNHG1-211ENST00000539921 DMDP11532 3685 aa4.07□□□□□ -1.76
SNHG1-211ENST00000539921 USP34Q70CQ2 3546 aa4.07□□□□□ -1.76
SNHG1-211ENST00000539921 VPS13AQ96RL7 3174 aa4.06□□□□□ -1.76
SNHG1-211ENST00000539921 SPAG11BQ08648 103 aa4.06□□□□□ -1.76
SNHG1-211ENST00000539921 COA5Q86WW8 74 aa4.06□□□□□ -1.76
SNHG1-211ENST00000539921 Q8N9L7 120 aa4.06□□□□□ -1.76
SNHG1-211ENST00000539921 FDCSPQ8NFU4 85 aa4.06□□□□□ -1.76
SNHG1-211ENST00000539921 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-211ENST00000539921 ZNF292O60281 2723 aa4.06□□□□□ -1.76
SNHG1-211ENST00000539921 TRGV4A0A0C4DH28 118 aa4.05□□□□□ -1.76
SNHG1-211ENST00000539921 Q8NBF4 154 aa4.05□□□□□ -1.76
SNHG1-211ENST00000539921 RETNLBQ9BQ08 111 aa4.05□□□□□ -1.76
SNHG1-211ENST00000539921 GVINP1Q7Z2Y8 2422 aa4.05□□□□□ -1.76
SNHG1-211ENST00000539921 AHCTF1Q8WYP5 2266 aa4.04□□□□□ -1.76
SNHG1-211ENST00000539921 RTL8CO15255 209 aa4.04□□□□□ -1.76
SNHG1-211ENST00000539921 Q8NAQ8 132 aa4.04□□□□□ -1.76
SNHG1-211ENST00000539921 CACNA1BQ00975 2339 aa4.04□□□□□ -1.76
SNHG1-211ENST00000539921 ICE1Q9Y2F5 2266 aa4.04□□□□□ -1.76
SNHG1-211ENST00000539921 FRYLO94915 3013 aa4.03□□□□□ -1.76
SNHG1-211ENST00000539921 OTOGLQ3ZCN5 2332 aa4.03□□□□□ -1.76
SNHG1-211ENST00000539921 IGKV2D-24A0A075B6R9 120 aa4.03□□□□□ -1.76
SNHG1-211ENST00000539921 IGKV3-20P01619 116 aa4.03□□□□□ -1.76
SNHG1-211ENST00000539921 DSCR10P59022 87 aa4.03□□□□□ -1.76
SNHG1-211ENST00000539921 KPRPQ5T749 579 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-211ENST00000539921 ST20-AS1Q8NBB2 130 aa4.03□□□□□ -1.76
SNHG1-211ENST00000539921 CACNA1AO00555 2505 aa4.03□□□□□ -1.76
SNHG1-211ENST00000539921 KRTAP29-1A8MX34 341 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-211ENST00000539921 H0Y9P7 68 aa4.02□□□□□ -1.77
SNHG1-211ENST00000539921 PRR3P79522 188 aaKnown RBP4.02□□□□□ -1.77
SNHG1-211ENST00000539921 PRB3Q04118 309 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-211ENST00000539921 DOPEY2Q9Y3R5 2298 aa4.02□□□□□ -1.77
SNHG1-211ENST00000539921 ZFHX2Q9C0A1 2572 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-211ENST00000539921 CFAP54Q96N23 3096 aa4.01□□□□□ -1.77
SNHG1-211ENST00000539921 IGKV3-7A0A075B6H7 116 aa4.01□□□□□ -1.77
SNHG1-211ENST00000539921 SLURP1P55000 103 aa4.01□□□□□ -1.77
SNHG1-211ENST00000539921 XAGE1AQ9HD64 81 aa4.01□□□□□ -1.77
SNHG1-211ENST00000539921 DMXL1Q9Y485 3027 aa4.01□□□□□ -1.77
SNHG1-211ENST00000539921 DEFB131BA0A096LNP1 70 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms