RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 CCKP06307 115 aa12.37□□□□□ -0.43
RAB40C-205ENST00000539661 PAX4O43316 350 aa12.36□□□□□ -0.43
RAB40C-205ENST00000539661 ATP5EP2Q5VTU8 51 aa12.36□□□□□ -0.43
RAB40C-205ENST00000539661 LINC00167Q96N53 147 aa12.36□□□□□ -0.43
RAB40C-205ENST00000539661 CYSTM1Q9H1C7 97 aa12.36□□□□□ -0.43
RAB40C-205ENST00000539661 A0A096LNT2 108 aa12.35□□□□□ -0.43
RAB40C-205ENST00000539661 DPH3Q96FX2 82 aa12.35□□□□□ -0.43
RAB40C-205ENST00000539661 A0A087WVE0 104 aa12.34□□□□□ -0.43
RAB40C-205ENST00000539661 JMJD7-PLA2G4BH0Y9G9 81 aa12.34□□□□□ -0.43
RAB40C-205ENST00000539661 NOP10Q9NPE3 64 aaKnown RBP12.33□□□□□ -0.44
RAB40C-205ENST00000539661 SS18Q15532 418 aa12.33□□□□□ -0.44
RAB40C-205ENST00000539661 PFN2P35080 140 aa12.32□□□□□ -0.44
RAB40C-205ENST00000539661 CR1P17927 2039 aa12.32□□□□□ -0.44
RAB40C-205ENST00000539661 KHDC1LQ5JSQ8 128 aa12.31□□□□□ -0.44
RAB40C-205ENST00000539661 C16orf74Q96GX8 76 aa12.31□□□□□ -0.44
RAB40C-205ENST00000539661 FASNP49327 2511 aaKnown RBP12.31□□□□□ -0.44
RAB40C-205ENST00000539661 GCN1Q92616 2671 aaKnown RBP12.31□□□□□ -0.44
RAB40C-205ENST00000539661 IGLV4-60A0A075B6I1 120 aa12.31□□□□□ -0.44
RAB40C-205ENST00000539661 SLPIP03973 132 aa12.31□□□□□ -0.44
RAB40C-205ENST00000539661 TRBV6-8A0A0A6YYG3 113 aa12.3□□□□□ -0.44
RAB40C-205ENST00000539661 WIPF1O43516 503 aa12.3□□□□□ -0.44
RAB40C-205ENST00000539661 IGKV3OR2-268A0A0C4DH90 116 aa12.3□□□□□ -0.44
RAB40C-205ENST00000539661 JMJD1CQ15652 2540 aa12.3□□□□□ -0.44
RAB40C-205ENST00000539661 PDZD2O15018 2839 aa12.29□□□□□ -0.44
RAB40C-205ENST00000539661 TRGV2A0A075B6R0 118 aa12.29□□□□□ -0.44
RAB40C-205ENST00000539661 LOC100131303A0A0U1RQF7 123 aa12.29□□□□□ -0.44
RAB40C-205ENST00000539661 TMEM86BQ8N661 226 aa12.29□□□□□ -0.44
RAB40C-205ENST00000539661 LYPD5Q6UWN5 251 aa12.28□□□□□ -0.44
RAB40C-205ENST00000539661 PLAC8L1A1L4L8 177 aa12.28□□□□□ -0.44
RAB40C-205ENST00000539661 NDUFC2-KCTD14E9PQ53 114 aa12.28□□□□□ -0.44
RAB40C-205ENST00000539661 TMEM256-PLSCR3K7ERE1 68 aa12.28□□□□□ -0.44
RAB40C-205ENST00000539661 C11orf44Q8N8P7 122 aa12.28□□□□□ -0.44
RAB40C-205ENST00000539661 TRBV10-3A0A0K0K1G6 114 aa12.27□□□□□ -0.44
RAB40C-205ENST00000539661 C6orf226Q5I0X4 101 aa12.27□□□□□ -0.44
RAB40C-205ENST00000539661 KIR2DL5BQ8NHK3 375 aa12.27□□□□□ -0.44
RAB40C-205ENST00000539661 TRGV4A0A0C4DH28 118 aa12.26□□□□□ -0.45
RAB40C-205ENST00000539661 A0A1W2PRX2 142 aa12.26□□□□□ -0.45
RAB40C-205ENST00000539661 Q8N814 137 aa12.26□□□□□ -0.45
RAB40C-205ENST00000539661 CMC4P56277 68 aaPredicted RBP12.26□□□□□ -0.45
RAB40C-205ENST00000539661 LINC00959A0A1B0GUT2 108 aa12.25□□□□□ -0.45
RAB40C-205ENST00000539661 NDUFC2O95298 119 aa12.25□□□□□ -0.45
RAB40C-205ENST00000539661 Q8IZM0 81 aa12.25□□□□□ -0.45
RAB40C-205ENST00000539661 UNC79Q9P2D8 2635 aa12.25□□□□□ -0.45
RAB40C-205ENST00000539661 GHRHP01286 108 aa12.23□□□□□ -0.45
RAB40C-205ENST00000539661 GIG44P09565 113 aaPredicted RBP12.23□□□□□ -0.45
RAB40C-205ENST00000539661 IGHV4-31P0DP07 118 aa12.23□□□□□ -0.45
RAB40C-205ENST00000539661 DSCR8Q96T75 97 aa12.23□□□□□ -0.45
RAB40C-205ENST00000539661 NANOS2P60321 138 aaKnown RBP12.22□□□□□ -0.45
RAB40C-205ENST00000539661 FHL2Q14192 279 aa12.22□□□□□ -0.45
RAB40C-205ENST00000539661 UBL5Q9BZL1 73 aa12.21□□□□□ -0.45
RAB40C-205ENST00000539661 HILS1P60008 231 aa12.21□□□□□ -0.46
RAB40C-205ENST00000539661 OTOGQ6ZRI0 2925 aa12.2□□□□□ -0.46
RAB40C-205ENST00000539661 BCE1O60756 84 aa12.2□□□□□ -0.46
RAB40C-205ENST00000539661 OXTP01178 125 aa12.2□□□□□ -0.46
RAB40C-205ENST00000539661 COX17Q14061 63 aa12.19□□□□□ -0.46
RAB40C-205ENST00000539661 A0A1B0GUV1 79 aa12.18□□□□□ -0.46
RAB40C-205ENST00000539661 WFDC11Q8NEX6 87 aa12.18□□□□□ -0.46
RAB40C-205ENST00000539661 C11orf68Q9H3H3 251 aaKnown RBP12.18□□□□□ -0.46
RAB40C-205ENST00000539661 SETXQ7Z333 2677 aaKnown RBP12.18□□□□□ -0.46
RAB40C-205ENST00000539661 TRAV23DV6A0A075B6W5 121 aa12.18□□□□□ -0.46
RAB40C-205ENST00000539661 ENHOQ6UWT2 76 aa12.18□□□□□ -0.46
RAB40C-205ENST00000539661 ANK3Q12955 4377 aaKnown RBP12.17□□□□□ -0.46
RAB40C-205ENST00000539661 CCL24O00175 119 aa12.17□□□□□ -0.46
RAB40C-205ENST00000539661 FAM19A1Q7Z5A9 133 aa12.17□□□□□ -0.46
RAB40C-205ENST00000539661 XCL1P47992 114 aa12.16□□□□□ -0.46
RAB40C-205ENST00000539661 CSNK1G2-AS1Q8NCQ2 148 aa12.16□□□□□ -0.46
RAB40C-205ENST00000539661 WFDC9Q8NEX5 89 aa12.15□□□□□ -0.46
RAB40C-205ENST00000539661 Q5XG85 94 aa12.14□□□□□ -0.47
RAB40C-205ENST00000539661 KRTAP1-3Q8IUG1 177 aa12.14□□□□□ -0.47
RAB40C-205ENST00000539661 KMT2BQ9UMN6 2715 aaPredicted RBP12.13□□□□□ -0.47
RAB40C-205ENST00000539661 LOC110117498A0A087WWA1 95 aa12.13□□□□□ -0.47
RAB40C-205ENST00000539661 DEFB113Q30KQ7 82 aa12.13□□□□□ -0.47
RAB40C-205ENST00000539661 VWFP04275 2813 aa12.13□□□□□ -0.47
RAB40C-205ENST00000539661 PRR3P79522 188 aaKnown RBP12.12□□□□□ -0.47
RAB40C-205ENST00000539661 FN1P02751 2386 aaKnown RBP12.12□□□□□ -0.47
RAB40C-205ENST00000539661 RPL35AP18077 110 aaKnown RBP12.12□□□□□ -0.47
RAB40C-205ENST00000539661 Q6ZQT0 140 aa12.12□□□□□ -0.47
RAB40C-205ENST00000539661 C2CD3Q4AC94 2353 aa12.11□□□□□ -0.47
RAB40C-205ENST00000539661 IGHV4-28A0A0C4DH34 117 aa12.11□□□□□ -0.47
RAB40C-205ENST00000539661 LINC00575Q6W349 94 aa12.11□□□□□ -0.47
RAB40C-205ENST00000539661 TRAV7A0A075B6U4 112 aa12.11□□□□□ -0.47
RAB40C-205ENST00000539661 ZNF561-AS1K7EIQ3 104 aa12.11□□□□□ -0.47
RAB40C-205ENST00000539661 RBM3P98179 157 aaKnown RBP12.11□□□□□ -0.47
RAB40C-205ENST00000539661 C20orf197Q8N268 126 aa12.11□□□□□ -0.47
RAB40C-205ENST00000539661 KIAA0087Q14695 138 aa12.1□□□□□ -0.47
RAB40C-205ENST00000539661 C6orf99Q4VX62 202 aa12.1□□□□□ -0.47
RAB40C-205ENST00000539661 C19orf73Q9NVV2 129 aa12.1□□□□□ -0.47
RAB40C-205ENST00000539661 FAM236DA0A1B0GTK5 79 aa12.09□□□□□ -0.47
RAB40C-205ENST00000539661 FAM236CP0DP71 79 aa12.09□□□□□ -0.47
RAB40C-205ENST00000539661 C4orf26Q17RF5 130 aa12.09□□□□□ -0.47
RAB40C-205ENST00000539661 C6orf223Q8N319 242 aa12.09□□□□□ -0.47
RAB40C-205ENST00000539661 PLA2G2AP14555 144 aa12.08□□□□□ -0.47
RAB40C-205ENST00000539661 H3BQ85 93 aa12.08□□□□□ -0.48
RAB40C-205ENST00000539661 CD164L2Q6UWJ8 174 aa12.08□□□□□ -0.48
RAB40C-205ENST00000539661 WFDC10AQ9H1F0 79 aa12.08□□□□□ -0.48
RAB40C-205ENST00000539661 LINC00612Q8N6U2 182 aa12.07□□□□□ -0.48
RAB40C-205ENST00000539661 MUC7Q8TAX7 377 aa12.07□□□□□ -0.48
RAB40C-205ENST00000539661 EPM2AB3EWF7 344 aa12.07□□□□□ -0.48
RAB40C-205ENST00000539661 GYPEP15421 78 aa12.07□□□□□ -0.48
RAB40C-205ENST00000539661 NBEAL2Q6ZNJ1 2754 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms