RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 NMSQ5H8A3 153 aa0.69□□□□□ -2.3
SNHG1-210ENST00000539303 KCPQ6ZWJ8 1503 aa0.69□□□□□ -2.3
SNHG1-210ENST00000539303 KIF14Q15058 1648 aa0.68□□□□□ -2.3
SNHG1-210ENST00000539303 FXYD6-FXYD2A0A087WZ82 144 aa0.68□□□□□ -2.3
SNHG1-210ENST00000539303 TRBV7-4A0A0J9YYF1 115 aa0.68□□□□□ -2.3
SNHG1-210ENST00000539303 WFDC2Q14508 124 aa0.68□□□□□ -2.3
SNHG1-210ENST00000539303 PIGYQ3MUY2 71 aa0.68□□□□□ -2.3
SNHG1-210ENST00000539303 FAM208BQ5VWN6 2430 aa0.68□□□□□ -2.3
SNHG1-210ENST00000539303 CUX1P39880 1505 aa0.68□□□□□ -2.3
SNHG1-210ENST00000539303 NEXMIFQ5QGS0 1516 aa0.68□□□□□ -2.3
SNHG1-210ENST00000539303 LINC00959A0A1B0GUT2 108 aa0.67□□□□□ -2.3
SNHG1-210ENST00000539303 KANTRA0A1W2PQU2 76 aa0.67□□□□□ -2.3
SNHG1-210ENST00000539303 IQCF6A8MYZ5 107 aa0.67□□□□□ -2.3
SNHG1-210ENST00000539303 I3L2K1 104 aa0.67□□□□□ -2.3
SNHG1-210ENST00000539303 ADIRFQ15847 76 aa0.67□□□□□ -2.3
SNHG1-210ENST00000539303 LINC00643Q86TS7 51 aa0.67□□□□□ -2.3
SNHG1-210ENST00000539303 Q8IZM0 81 aa0.67□□□□□ -2.3
SNHG1-210ENST00000539303 PAPPAQ13219 1627 aa0.67□□□□□ -2.3
SNHG1-210ENST00000539303 ARHGAP35Q9NRY4 1499 aa0.67□□□□□ -2.3
SNHG1-210ENST00000539303 A0A0G2JMZ2 1700 aa0.67□□□□□ -2.3
SNHG1-210ENST00000539303 KIF20BQ96Q89 1820 aa0.66□□□□□ -2.3
SNHG1-210ENST00000539303 CACNA1HO95180 2353 aa0.66□□□□□ -2.3
SNHG1-210ENST00000539303 MYMXA0A1B0GTQ4 84 aa0.66□□□□□ -2.3
SNHG1-210ENST00000539303 ACYP1P07311 99 aa0.66□□□□□ -2.3
SNHG1-210ENST00000539303 KRTAP19-3Q7Z4W3 81 aa0.66□□□□□ -2.3
SNHG1-210ENST00000539303 ST20Q9HBF5 79 aa0.66□□□□□ -2.3
SNHG1-210ENST00000539303 UBE2D4Q9Y2X8 147 aa0.66□□□□□ -2.3
SNHG1-210ENST00000539303 MAP3K4Q9Y6R4 1608 aa0.66□□□□□ -2.3
SNHG1-210ENST00000539303 GOLGA4Q13439 2230 aaKnown RBP0.66□□□□□ -2.3
SNHG1-210ENST00000539303 PLCE1Q9P212 2302 aa0.66□□□□□ -2.3
SNHG1-210ENST00000539303 FBN2P35556 2912 aa0.65□□□□□ -2.3
SNHG1-210ENST00000539303 NHSL1Q5SYE7 1610 aa0.65□□□□□ -2.31
SNHG1-210ENST00000539303 PKD1L3Q7Z443 1732 aa0.65□□□□□ -2.31
SNHG1-210ENST00000539303 IGLC2P0DOY2 106 aa0.65□□□□□ -2.31
SNHG1-210ENST00000539303 IGLC3P0DOY3 106 aa0.65□□□□□ -2.31
SNHG1-210ENST00000539303 PLGLAQ15195 96 aa0.65□□□□□ -2.31
SNHG1-210ENST00000539303 SPINK6Q6UWN8 80 aa0.65□□□□□ -2.31
SNHG1-210ENST00000539303 SETBP1Q9Y6X0 1596 aa0.65□□□□□ -2.31
SNHG1-210ENST00000539303 MAGI2Q86UL8 1455 aa0.64□□□□□ -2.31
SNHG1-210ENST00000539303 TULP4Q9NRJ4 1543 aa0.64□□□□□ -2.31
SNHG1-210ENST00000539303 A0A1B0GUT8 65 aa0.63□□□□□ -2.31
SNHG1-210ENST00000539303 CEBPZOSA8MTT3 80 aa0.63□□□□□ -2.31
SNHG1-210ENST00000539303 DEFB112Q30KQ8 113 aa0.63□□□□□ -2.31
SNHG1-210ENST00000539303 TTC28Q96AY4 2481 aa0.63□□□□□ -2.31
SNHG1-210ENST00000539303 KIAA0556O60303 1618 aa0.63□□□□□ -2.31
SNHG1-210ENST00000539303 SAMD9Q5K651 1589 aa0.62□□□□□ -2.31
SNHG1-210ENST00000539303 APCP25054 2843 aa0.62□□□□□ -2.31
SNHG1-210ENST00000539303 ERVK-7P63135 1459 aa0.62□□□□□ -2.31
SNHG1-210ENST00000539303 DOPEY2Q9Y3R5 2298 aa0.62□□□□□ -2.31
SNHG1-210ENST00000539303 BIVM-ERCC5R4GMW8 1640 aa0.62□□□□□ -2.31
SNHG1-210ENST00000539303 NOTCH1P46531 2555 aa0.62□□□□□ -2.31
SNHG1-210ENST00000539303 ZFHX3Q15911 3703 aa0.62□□□□□ -2.31
SNHG1-210ENST00000539303 TMEM131LA2VDJ0 1609 aa0.61□□□□□ -2.31
SNHG1-210ENST00000539303 UBR3Q6ZT12 1888 aa0.61□□□□□ -2.31
SNHG1-210ENST00000539303 DEFB123Q8N688 67 aa0.61□□□□□ -2.31
SNHG1-210ENST00000539303 USMG5Q96IX5 58 aa0.61□□□□□ -2.31
SNHG1-210ENST00000539303 TNCP24821 2201 aa0.61□□□□□ -2.31
SNHG1-210ENST00000539303 USF3Q68DE3 2245 aa0.61□□□□□ -2.31
SNHG1-210ENST00000539303 DIP2BQ9P265 1576 aa0.61□□□□□ -2.31
SNHG1-210ENST00000539303 ALKQ9UM73 1620 aa0.6□□□□□ -2.31
SNHG1-210ENST00000539303 COL14A1Q05707 1796 aaKnown RBP0.6□□□□□ -2.31
SNHG1-210ENST00000539303 DCAF1Q9Y4B6 1507 aa0.6□□□□□ -2.31
SNHG1-210ENST00000539303 H3BUT2 72 aa0.6□□□□□ -2.31
SNHG1-210ENST00000539303 CFDP00746 253 aaPredicted RBP0.6□□□□□ -2.31
SNHG1-210ENST00000539303 COX6B1P14854 86 aa0.6□□□□□ -2.31
SNHG1-210ENST00000539303 CRIPTQ9P021 101 aa0.6□□□□□ -2.31
SNHG1-210ENST00000539303 URB1O60287 2271 aaKnown RBP0.6□□□□□ -2.31
SNHG1-210ENST00000539303 SLIT1O75093 1534 aa0.59□□□□□ -2.31
SNHG1-210ENST00000539303 LRRC37AA6NMS7 1700 aa0.59□□□□□ -2.31
SNHG1-210ENST00000539303 F8P00451 2351 aa0.59□□□□□ -2.31
SNHG1-210ENST00000539303 K7EQZ3 153 aa0.59□□□□□ -2.31
SNHG1-210ENST00000539303 PRH1P02810 166 aa0.59□□□□□ -2.31
SNHG1-210ENST00000539303 POLQO75417 2590 aa0.59□□□□□ -2.32
SNHG1-210ENST00000539303 RGPD2P0DJD1 1756 aa0.59□□□□□ -2.32
SNHG1-210ENST00000539303 CELSR2Q9HCU4 2923 aa0.59□□□□□ -2.32
SNHG1-210ENST00000539303 ATP7BP35670 1465 aa0.59□□□□□ -2.32
SNHG1-210ENST00000539303 CCDC141Q6ZP82 1450 aa0.59□□□□□ -2.32
SNHG1-210ENST00000539303 ANKRD17O75179 2603 aaKnown RBP0.59□□□□□ -2.32
SNHG1-210ENST00000539303 TSC2P49815 1807 aa0.59□□□□□ -2.32
SNHG1-210ENST00000539303 C2CD3Q4AC94 2353 aa0.59□□□□□ -2.32
SNHG1-210ENST00000539303 FMN2Q9NZ56 1722 aa0.58□□□□□ -2.32
SNHG1-210ENST00000539303 BDP1A6H8Y1 2624 aa0.58□□□□□ -2.32
SNHG1-210ENST00000539303 ZNF469Q96JG9 3925 aaPredicted RBP0.58□□□□□ -2.32
SNHG1-210ENST00000539303 KRTAP2-3P0C7H8 128 aa0.58□□□□□ -2.32
SNHG1-210ENST00000539303 BVES-AS1Q5T3Y7 98 aa0.58□□□□□ -2.32
SNHG1-210ENST00000539303 GAFA1Q96PS6 74 aa0.58□□□□□ -2.32
SNHG1-210ENST00000539303 KRTAP2-4Q9BYR9 128 aa0.58□□□□□ -2.32
SNHG1-210ENST00000539303 KRTAP2-1Q9BYU5 128 aa0.58□□□□□ -2.32
SNHG1-210ENST00000539303 ABCA12Q86UK0 2595 aa0.58□□□□□ -2.32
SNHG1-210ENST00000539303 KDM5DQ9BY66 1539 aa0.58□□□□□ -2.32
SNHG1-210ENST00000539303 RGPD1P0DJD0 1748 aa0.58□□□□□ -2.32
SNHG1-210ENST00000539303 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
SNHG1-210ENST00000539303 ZNF292O60281 2723 aa0.57□□□□□ -2.32
SNHG1-210ENST00000539303 I3L3M4 83 aa0.57□□□□□ -2.32
SNHG1-210ENST00000539303 COX8AP10176 69 aa0.57□□□□□ -2.32
SNHG1-210ENST00000539303 Q5BKY6 102 aa0.57□□□□□ -2.32
SNHG1-210ENST00000539303 SMR3AQ99954 134 aa0.57□□□□□ -2.32
SNHG1-210ENST00000539303 SPTBN2O15020 2390 aa0.57□□□□□ -2.32
SNHG1-210ENST00000539303 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.57□□□□□ -2.32
SNHG1-210ENST00000539303 LRRC7Q96NW7 1537 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms