RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 ZNF561-AS1K7EIQ3 104 aa8.17□□□□□ -1.1
DDB1-209ENST00000537877 PSCAO43653 123 aa8.17□□□□□ -1.1
DDB1-209ENST00000537877 C2orf48Q96LS8 159 aa8.17□□□□□ -1.1
DDB1-209ENST00000537877 SPANXB1Q9NS25 103 aaPredicted RBP8.17□□□□□ -1.1
DDB1-209ENST00000537877 USP17L23D6RBM5 183 aa8.16□□□□□ -1.1
DDB1-209ENST00000537877 HSD52Q0P140 79 aa8.16□□□□□ -1.1
DDB1-209ENST00000537877 TAL2Q16559 108 aa8.16□□□□□ -1.1
DDB1-209ENST00000537877 NTN5Q8WTR8 489 aaPredicted RBP8.16□□□□□ -1.1
DDB1-209ENST00000537877 M0R2N4 97 aa8.15□□□□□ -1.1
DDB1-209ENST00000537877 CIRBPQ14011 172 aaKnown RBP8.15□□□□□ -1.1
DDB1-209ENST00000537877 HIGD2BQ4VC39 106 aa8.15□□□□□ -1.1
DDB1-209ENST00000537877 MEIG1Q5JSS6 88 aa8.15□□□□□ -1.1
DDB1-209ENST00000537877 C2orf82Q6UX34 121 aa8.15□□□□□ -1.1
DDB1-209ENST00000537877 VPS13DQ5THJ4 4388 aa8.14□□□□□ -1.11
DDB1-209ENST00000537877 Q6ZRN7 208 aaPredicted RBP8.14□□□□□ -1.11
DDB1-209ENST00000537877 Q6ZVH6 145 aa8.14□□□□□ -1.11
DDB1-209ENST00000537877 C6orf223Q8N319 242 aa8.14□□□□□ -1.11
DDB1-209ENST00000537877 LITAFQ99732 161 aa8.14□□□□□ -1.11
DDB1-209ENST00000537877 SPANXDQ9BXN6 97 aa8.14□□□□□ -1.11
DDB1-209ENST00000537877 SPANXCQ9NY87 97 aa8.14□□□□□ -1.11
DDB1-209ENST00000537877 M0R143 59 aa8.13□□□□□ -1.11
DDB1-209ENST00000537877 C14orf177Q52M58 125 aa8.13□□□□□ -1.11
DDB1-209ENST00000537877 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
DDB1-209ENST00000537877 HIST1H4GQ99525 98 aa8.13□□□□□ -1.11
DDB1-209ENST00000537877 TRBV30A0A0K0K1B3 111 aa8.12□□□□□ -1.11
DDB1-209ENST00000537877 SRSF9Q13242 221 aaKnown RBP eCLIP8.12□□□□□ -1.11
DDB1-209ENST00000537877 LINC00526Q96FQ7 95 aa8.12□□□□□ -1.11
DDB1-209ENST00000537877 ERG28Q9UKR5 140 aa8.12□□□□□ -1.11
DDB1-209ENST00000537877 ALMS1Q8TCU4 4167 aa8.12□□□□□ -1.11
DDB1-209ENST00000537877 DNAH1Q9P2D7 4330 aa8.12□□□□□ -1.11
DDB1-209ENST00000537877 SMIM13P0DJ93 91 aa8.11□□□□□ -1.11
DDB1-209ENST00000537877 COX17Q14061 63 aa8.11□□□□□ -1.11
DDB1-209ENST00000537877 UNQ6190/PRO20217Q6UXQ8 127 aa8.11□□□□□ -1.11
DDB1-209ENST00000537877 IFITM1P13164 125 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 GCSHP23434 173 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 SYCNQ0VAF6 134 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 C10orf25Q5T742 122 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 C1orf134Q5TEV5 83 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 CEND1Q8N111 149 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 COPS9Q8WXC6 57 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 LECT2O14960 151 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 HINT1P49773 126 aaPredicted RBP8.1□□□□□ -1.11
DDB1-209ENST00000537877 LINC00158P58513 81 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 WFDC2Q14508 124 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 BVES-AS1Q5T3Y7 98 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 ADAMTSL4-AS1Q5T5F5 129 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 Q6ZRU5 148 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 PPDPFQ9H3Y8 114 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 C6orf48Q9UBA6 75 aa8.1□□□□□ -1.11
DDB1-209ENST00000537877 LRCOL1A6NCL2 159 aa8.09□□□□□ -1.12
DDB1-209ENST00000537877 PFN2P35080 140 aa8.09□□□□□ -1.12
DDB1-209ENST00000537877 PTTG1IPP53801 180 aa8.09□□□□□ -1.12
DDB1-209ENST00000537877 RNF151Q2KHN1 245 aa8.09□□□□□ -1.12
DDB1-209ENST00000537877 CARD19Q96LW7 228 aa8.09□□□□□ -1.12
DDB1-209ENST00000537877 LYSTQ99698 3801 aa8.09□□□□□ -1.12
DDB1-209ENST00000537877 A0A0U1RRA0 63 aa8.08□□□□□ -1.12
DDB1-209ENST00000537877 LCE6AA0A183 80 aa8.08□□□□□ -1.12
DDB1-209ENST00000537877 TMEM238LA0A1B0GVL6 79 aa8.08□□□□□ -1.12
DDB1-209ENST00000537877 A6NJY4 79 aa8.08□□□□□ -1.12
DDB1-209ENST00000537877 MIR7-3HGQ8N6C7 128 aa8.08□□□□□ -1.12
DDB1-209ENST00000537877 CNBPP62633 177 aaKnown RBP8.07□□□□□ -1.12
DDB1-209ENST00000537877 RPL24P83731 157 aaKnown RBP8.07□□□□□ -1.12
DDB1-209ENST00000537877 C9orf116Q5BN46 136 aaPredicted RBP8.07□□□□□ -1.12
DDB1-209ENST00000537877 DAND5Q8N907 189 aa8.07□□□□□ -1.12
DDB1-209ENST00000537877 LINC00308Q8TCZ7 52 aa8.07□□□□□ -1.12
DDB1-209ENST00000537877 SNHG12Q9BXW3 62 aa8.07□□□□□ -1.12
DDB1-209ENST00000537877 EREGO14944 169 aa8.06□□□□□ -1.12
DDB1-209ENST00000537877 FXYD2P54710 66 aa8.06□□□□□ -1.12
DDB1-209ENST00000537877 BATFQ16520 125 aa8.06□□□□□ -1.12
DDB1-209ENST00000537877 MUSTN1Q8IVN3 82 aa8.06□□□□□ -1.12
DDB1-209ENST00000537877 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.05□□□□□ -1.12
DDB1-209ENST00000537877 A6NDN8 102 aa8.05□□□□□ -1.12
DDB1-209ENST00000537877 SLPIP03973 132 aa8.05□□□□□ -1.12
DDB1-209ENST00000537877 A0A087WTM6 91 aa8.04□□□□□ -1.12
DDB1-209ENST00000537877 NDUFC2-KCTD14E9PQ53 114 aa8.04□□□□□ -1.12
DDB1-209ENST00000537877 TLX1NBP0CAT3 122 aa8.04□□□□□ -1.12
DDB1-209ENST00000537877 NPC2P61916 151 aa8.04□□□□□ -1.12
DDB1-209ENST00000537877 Q8N814 137 aa8.04□□□□□ -1.12
DDB1-209ENST00000537877 DNAH6Q9C0G6 4158 aa8.04□□□□□ -1.12
DDB1-209ENST00000537877 LOC107984156A0A0G2JMH3 177 aa8.03□□□□□ -1.12
DDB1-209ENST00000537877 SOSTDC1Q6X4U4 206 aa8.03□□□□□ -1.12
DDB1-209ENST00000537877 ARL17AQ8IVW1 177 aa8.03□□□□□ -1.12
DDB1-209ENST00000537877 A4D1N5 150 aa8.02□□□□□ -1.13
DDB1-209ENST00000537877 SND1-IT1Q9HBX3 110 aa8.02□□□□□ -1.13
DDB1-209ENST00000537877 NHP2Q9NX24 153 aaKnown RBP8.02□□□□□ -1.13
DDB1-209ENST00000537877 PKIGQ9Y2B9 76 aa8.02□□□□□ -1.13
DDB1-209ENST00000537877 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.01□□□□□ -1.13
DDB1-209ENST00000537877 A0A1B0GWB2 263 aa8.01□□□□□ -1.13
DDB1-209ENST00000537877 EIF4EBP3O60516 100 aaPredicted RBP8.01□□□□□ -1.13
DDB1-209ENST00000537877 LBHQ53QV2 105 aaPredicted RBP8.01□□□□□ -1.13
DDB1-209ENST00000537877 COL5A1-AS1Q5SY13 56 aa8.01□□□□□ -1.13
DDB1-209ENST00000537877 A0A0B4J2C4 111 aa8□□□□□ -1.13
DDB1-209ENST00000537877 LOC107984640A0A0U1RRK4 108 aa8□□□□□ -1.13
DDB1-209ENST00000537877 RTL8CO15255 209 aa7.99□□□□□ -1.13
DDB1-209ENST00000537877 RPL18AQ02543 176 aaKnown RBP7.99□□□□□ -1.13
DDB1-209ENST00000537877 Q6ZRP5 223 aa7.99□□□□□ -1.13
DDB1-209ENST00000537877 NDUFC2O95298 119 aa7.98□□□□□ -1.13
DDB1-209ENST00000537877 C9orf163Q8N9P6 203 aa7.98□□□□□ -1.13
DDB1-209ENST00000537877 CFC1BP0CG36 223 aa7.97□□□□□ -1.13
DDB1-209ENST00000537877 CFC1P0CG37 223 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms