RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 SPTA1P02549 2419 aa-0.69□□□□□ -2.52
CCDC7-208ENST00000537047 DNAH9Q9NYC9 4486 aa-0.7□□□□□ -2.52
CCDC7-208ENST00000537047 FRYQ5TBA9 3013 aa-0.7□□□□□ -2.52
CCDC7-208ENST00000537047 FAM25AB3EWG3 89 aa-0.7□□□□□ -2.52
CCDC7-208ENST00000537047 FAM25CB3EWG5 89 aa-0.7□□□□□ -2.52
CCDC7-208ENST00000537047 FAM25GB3EWG6 89 aa-0.7□□□□□ -2.52
CCDC7-208ENST00000537047 HMGN4O00479 90 aa-0.7□□□□□ -2.52
CCDC7-208ENST00000537047 MT1BP07438 61 aa-0.7□□□□□ -2.52
CCDC7-208ENST00000537047 MT1HL1P0DM35 61 aa-0.7□□□□□ -2.52
CCDC7-208ENST00000537047 Q56UQ5 140 aa-0.7□□□□□ -2.52
CCDC7-208ENST00000537047 MEIG1Q5JSS6 88 aa-0.7□□□□□ -2.52
CCDC7-208ENST00000537047 SPANXDQ9BXN6 97 aa-0.7□□□□□ -2.52
CCDC7-208ENST00000537047 UNC13AQ9UPW8 1703 aa-0.7□□□□□ -2.52
CCDC7-208ENST00000537047 MUC3AQ02505 3323 aa-0.71□□□□□ -2.52
CCDC7-208ENST00000537047 RAPGEF6Q8TEU7 1601 aa-0.71□□□□□ -2.52
CCDC7-208ENST00000537047 ADGRG4Q8IZF6 3080 aa-0.71□□□□□ -2.52
CCDC7-208ENST00000537047 SFT2D2O95562 160 aa-0.71□□□□□ -2.52
CCDC7-208ENST00000537047 BTG2P78543 158 aa-0.71□□□□□ -2.52
CCDC7-208ENST00000537047 LINC00470Q9BZP3 86 aa-0.71□□□□□ -2.52
CCDC7-208ENST00000537047 POLA1P09884 1462 aaPredicted RBP-0.72□□□□□ -2.52
CCDC7-208ENST00000537047 SSSCA1O60232 199 aa-0.72□□□□□ -2.52
CCDC7-208ENST00000537047 KLK9Q2XQG4 91 aa-0.72□□□□□ -2.52
CCDC7-208ENST00000537047 C8orf59Q8N0T1 100 aaPredicted RBP-0.72□□□□□ -2.52
CCDC7-208ENST00000537047 TMEM263Q8WUH6 116 aaKnown RBP-0.72□□□□□ -2.52
CCDC7-208ENST00000537047 TSLPQ969D9 159 aa-0.72□□□□□ -2.52
CCDC7-208ENST00000537047 CPSF1Q10570 1443 aaKnown RBP-0.72□□□□□ -2.53
CCDC7-208ENST00000537047 GAPVD1Q14C86 1478 aa-0.73□□□□□ -2.53
CCDC7-208ENST00000537047 CRYBG3Q68DQ2 2970 aa-0.73□□□□□ -2.53
CCDC7-208ENST00000537047 DMXL1Q9Y485 3027 aa-0.73□□□□□ -2.53
CCDC7-208ENST00000537047 MGPP08493 103 aa-0.73□□□□□ -2.53
CCDC7-208ENST00000537047 DEFA5Q01523 94 aa-0.73□□□□□ -2.53
CCDC7-208ENST00000537047 LELP1Q5T871 98 aa-0.73□□□□□ -2.53
CCDC7-208ENST00000537047 MRPL54Q6P161 138 aaKnown RBP-0.73□□□□□ -2.53
CCDC7-208ENST00000537047 UTP20O75691 2785 aaKnown RBP-0.73□□□□□ -2.53
CCDC7-208ENST00000537047 DNAH10Q8IVF4 4471 aa-0.73□□□□□ -2.53
CCDC7-208ENST00000537047 NAIPQ13075 1403 aa-0.73□□□□□ -2.53
CCDC7-208ENST00000537047 FREM2Q5SZK8 3169 aa-0.73□□□□□ -2.53
CCDC7-208ENST00000537047 EP400Q96L91 3159 aa-0.74□□□□□ -2.53
CCDC7-208ENST00000537047 COL14A1Q05707 1796 aaKnown RBP-0.74□□□□□ -2.53
CCDC7-208ENST00000537047 MIF4GDA9UHW6 222 aaKnown RBP-0.74□□□□□ -2.53
CCDC7-208ENST00000537047 GNG7O60262 68 aa-0.74□□□□□ -2.53
CCDC7-208ENST00000537047 IFNGP01579 166 aa-0.74□□□□□ -2.53
CCDC7-208ENST00000537047 APOC2P02655 101 aa-0.74□□□□□ -2.53
CCDC7-208ENST00000537047 CCDC58Q4VC31 144 aa-0.74□□□□□ -2.53
CCDC7-208ENST00000537047 COMMD6Q7Z4G1 85 aa-0.74□□□□□ -2.53
CCDC7-208ENST00000537047 C5orf38Q86SI9 138 aa-0.74□□□□□ -2.53
CCDC7-208ENST00000537047 FXYD6Q9H0Q3 95 aa-0.74□□□□□ -2.53
CCDC7-208ENST00000537047 BICRAQ9NZM4 1560 aa-0.74□□□□□ -2.53
CCDC7-208ENST00000537047 PRUNE2Q8WUY3 3088 aa-0.75□□□□□ -2.53
CCDC7-208ENST00000537047 TRBV7-4A0A0J9YYF1 115 aa-0.75□□□□□ -2.53
CCDC7-208ENST00000537047 M0R2T5 61 aa-0.75□□□□□ -2.53
CCDC7-208ENST00000537047 FGF7P21781 194 aa-0.75□□□□□ -2.53
CCDC7-208ENST00000537047 WHAMMP3Q1A5X7 153 aa-0.75□□□□□ -2.53
CCDC7-208ENST00000537047 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.75□□□□□ -2.53
CCDC7-208ENST00000537047 MYOZ3Q8TDC0 251 aa-0.75□□□□□ -2.53
CCDC7-208ENST00000537047 NXT2Q9NPJ8 142 aaKnown RBP-0.75□□□□□ -2.53
CCDC7-208ENST00000537047 FAIMQ9NVQ4 179 aa-0.75□□□□□ -2.53
CCDC7-208ENST00000537047 AKAP9Q99996 3911 aa-0.75□□□□□ -2.53
CCDC7-208ENST00000537047 ARHGEF12Q9NZN5 1544 aa-0.75□□□□□ -2.53
CCDC7-208ENST00000537047 CATR1Q13166 79 aa-0.76□□□□□ -2.53
CCDC7-208ENST00000537047 SPRR4Q96PI1 79 aa-0.76□□□□□ -2.53
CCDC7-208ENST00000537047 NSD3Q9BZ95 1437 aa-0.76□□□□□ -2.53
CCDC7-208ENST00000537047 VCANP13611 3396 aa-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 CFAP54Q96N23 3096 aa-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 SPG11Q96JI7 2443 aa-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 PDE4DIPQ5VU43 2346 aa-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 PSME4Q14997 1843 aa-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 KDM5AP29375 1690 aaKnown RBP-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 MYOM1P52179 1685 aa-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 TULP4Q9NRJ4 1543 aa-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 IQSEC2Q5JU85 1478 aa-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 CHKB-CPT1BH3BT56 60 aa-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 C10orf113Q5VZT2 155 aa-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 KRTAP8-1Q8IUC2 63 aa-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 DEFB105AQ8NG35 78 aa-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 UQCR10Q9UDW1 63 aa-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 URB1O60287 2271 aaKnown RBP-0.77□□□□□ -2.53
CCDC7-208ENST00000537047 HTTP42858 3142 aa-0.78□□□□□ -2.53
CCDC7-208ENST00000537047 NDUFA2O43678 99 aa-0.78□□□□□ -2.53
CCDC7-208ENST00000537047 IGLC1P0CG04 106 aa-0.78□□□□□ -2.53
CCDC7-208ENST00000537047 UBA52P62987 128 aaKnown RBP-0.78□□□□□ -2.53
CCDC7-208ENST00000537047 CEP290O15078 2479 aa-0.78□□□□□ -2.53
CCDC7-208ENST00000537047 ATMQ13315 3056 aa-0.79□□□□□ -2.54
CCDC7-208ENST00000537047 CDC42SE2Q9NRR3 84 aa-0.79□□□□□ -2.54
CCDC7-208ENST00000537047 LINC00474Q9P2X8 69 aa-0.79□□□□□ -2.54
CCDC7-208ENST00000537047 GOLGA4Q13439 2230 aaKnown RBP-0.79□□□□□ -2.54
CCDC7-208ENST00000537047 DMDP11532 3685 aa-0.79□□□□□ -2.54
CCDC7-208ENST00000537047 DNAH14Q0VDD8 3507 aa-0.79□□□□□ -2.54
CCDC7-208ENST00000537047 C5orf42Q9H799 3197 aa-0.8□□□□□ -2.54
CCDC7-208ENST00000537047 MAGI1Q96QZ7 1491 aaPredicted RBP-0.8□□□□□ -2.54
CCDC7-208ENST00000537047 MBD5Q9P267 1494 aa-0.8□□□□□ -2.54
CCDC7-208ENST00000537047 SMG6Q86US8 1419 aaKnown RBP-0.8□□□□□ -2.54
CCDC7-208ENST00000537047 PCNTO95613 3336 aa-0.8□□□□□ -2.54
CCDC7-208ENST00000537047 PHLPP1O60346 1717 aa-0.8□□□□□ -2.54
CCDC7-208ENST00000537047 LINC00959A0A1B0GUT2 108 aa-0.8□□□□□ -2.54
CCDC7-208ENST00000537047 MT1AP04731 61 aa-0.8□□□□□ -2.54
CCDC7-208ENST00000537047 COX8AP10176 69 aa-0.8□□□□□ -2.54
CCDC7-208ENST00000537047 USMG5Q96IX5 58 aa-0.8□□□□□ -2.54
CCDC7-208ENST00000537047 ARL2-SNX15V9GYD0 113 aa-0.8□□□□□ -2.54
CCDC7-208ENST00000537047 SETBP1Q9Y6X0 1596 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms