RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 CDC42SE2Q9NRR3 84 aa5.66□□□□□ -1.5
CHD4-204ENST00000535810 CYSLTR1Q9Y271 337 aa5.66□□□□□ -1.5
CHD4-204ENST00000535810 IGHV3-64A0A075B6Q5 118 aa5.65□□□□□ -1.5
CHD4-204ENST00000535810 LINC00959A0A1B0GUT2 108 aa5.65□□□□□ -1.5
CHD4-204ENST00000535810 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.65□□□□□ -1.5
CHD4-204ENST00000535810 CCL25O15444 150 aa5.65□□□□□ -1.5
CHD4-204ENST00000535810 CIRBPQ14011 172 aaKnown RBP5.65□□□□□ -1.5
CHD4-204ENST00000535810 HIGD2BQ4VC39 106 aa5.65□□□□□ -1.5
CHD4-204ENST00000535810 SPATA45Q537H7 98 aa5.65□□□□□ -1.5
CHD4-204ENST00000535810 Q6ZN92 141 aa5.65□□□□□ -1.5
CHD4-204ENST00000535810 TOMM6Q96B49 74 aa5.65□□□□□ -1.5
CHD4-204ENST00000535810 SCGB3A1Q96QR1 104 aa5.65□□□□□ -1.5
CHD4-204ENST00000535810 PAM16Q9Y3D7 125 aa5.65□□□□□ -1.5
CHD4-204ENST00000535810 CHTF8P0CG12 524 aa5.64□□□□□ -1.51
CHD4-204ENST00000535810 C2orf66Q6UXQ4 117 aa5.64□□□□□ -1.51
CHD4-204ENST00000535810 UBE2D4Q9Y2X8 147 aa5.64□□□□□ -1.51
CHD4-204ENST00000535810 CSDC2Q9Y534 153 aaKnown RBP5.64□□□□□ -1.51
CHD4-204ENST00000535810 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
CHD4-204ENST00000535810 DDTP30046 118 aa5.63□□□□□ -1.51
CHD4-204ENST00000535810 SS18Q15532 418 aa5.63□□□□□ -1.51
CHD4-204ENST00000535810 CD164L2Q6UWJ8 174 aa5.63□□□□□ -1.51
CHD4-204ENST00000535810 ERASQ7Z444 233 aa5.63□□□□□ -1.51
CHD4-204ENST00000535810 ATOH7Q8N100 152 aa5.63□□□□□ -1.51
CHD4-204ENST00000535810 SPACA4Q8TDM5 124 aa5.63□□□□□ -1.51
CHD4-204ENST00000535810 TRAV12-1A0A0B4J245 112 aa5.62□□□□□ -1.51
CHD4-204ENST00000535810 IGHV1-58A0A0C4DH39 117 aa5.62□□□□□ -1.51
CHD4-204ENST00000535810 KRTAP29-1A8MX34 341 aaPredicted RBP5.62□□□□□ -1.51
CHD4-204ENST00000535810 RPL37AP61513 92 aaKnown RBP5.62□□□□□ -1.51
CHD4-204ENST00000535810 COX6A2Q02221 97 aa5.62□□□□□ -1.51
CHD4-204ENST00000535810 SMAGPQ0VAQ4 97 aa5.62□□□□□ -1.51
CHD4-204ENST00000535810 RNASE13Q5GAN3 156 aaKnown RBP5.62□□□□□ -1.51
CHD4-204ENST00000535810 Q6ZUT4 128 aa5.62□□□□□ -1.51
CHD4-204ENST00000535810 TMEM141Q96I45 108 aa5.62□□□□□ -1.51
CHD4-204ENST00000535810 MIEN1Q9BRT3 115 aa5.62□□□□□ -1.51
CHD4-204ENST00000535810 KRTAP4-8Q9BYQ9 185 aa5.62□□□□□ -1.51
CHD4-204ENST00000535810 A0A087WYN8 130 aa5.61□□□□□ -1.51
CHD4-204ENST00000535810 TRAV13-1A0A0B4J241 112 aa5.61□□□□□ -1.51
CHD4-204ENST00000535810 DPM2O94777 84 aa5.61□□□□□ -1.51
CHD4-204ENST00000535810 RPL39P62891 51 aaKnown RBP5.61□□□□□ -1.51
CHD4-204ENST00000535810 PAPPA-AS1Q5QFB9 102 aa5.61□□□□□ -1.51
CHD4-204ENST00000535810 PKHD1L1Q86WI1 4243 aa5.61□□□□□ -1.51
CHD4-204ENST00000535810 KRTAP19-1Q8IUB9 90 aa5.61□□□□□ -1.51
CHD4-204ENST00000535810 LINC00526Q96FQ7 95 aa5.61□□□□□ -1.51
CHD4-204ENST00000535810 TIMM17AQ99595 171 aa5.61□□□□□ -1.51
CHD4-204ENST00000535810 PMCHL2Q9BQD1 86 aa5.61□□□□□ -1.51
CHD4-204ENST00000535810 TIMM21Q9BVV7 248 aa5.61□□□□□ -1.51
CHD4-204ENST00000535810 UQCR10Q9UDW1 63 aa5.61□□□□□ -1.51
CHD4-204ENST00000535810 CBY1Q9Y3M2 126 aa5.61□□□□□ -1.51
CHD4-204ENST00000535810 LINC00587B1AMM8 73 aa5.6□□□□□ -1.51
CHD4-204ENST00000535810 COX7A2LO14548 114 aa5.6□□□□□ -1.51
CHD4-204ENST00000535810 IGKCP01834 107 aa5.6□□□□□ -1.51
CHD4-204ENST00000535810 IGLC3P0DOY3 106 aa5.6□□□□□ -1.51
CHD4-204ENST00000535810 PLNP26678 52 aa5.6□□□□□ -1.51
CHD4-204ENST00000535810 HNRNPA3P51991 378 aaKnown RBP5.6□□□□□ -1.51
CHD4-204ENST00000535810 FAM104AQ969W3 186 aa5.6□□□□□ -1.51
CHD4-204ENST00000535810 CARD19Q96LW7 228 aa5.6□□□□□ -1.51
CHD4-204ENST00000535810 PLAC8Q9NZF1 115 aa5.6□□□□□ -1.51
CHD4-204ENST00000535810 A0A096LNI7 61 aa5.59□□□□□ -1.51
CHD4-204ENST00000535810 IGKV2-24A0A0C4DH68 120 aa5.59□□□□□ -1.51
CHD4-204ENST00000535810 F8VRH5 84 aa5.59□□□□□ -1.51
CHD4-204ENST00000535810 NPSP0C0P6 89 aa5.59□□□□□ -1.51
CHD4-204ENST00000535810 PMVKQ15126 192 aa5.59□□□□□ -1.51
CHD4-204ENST00000535810 DPH3Q96FX2 82 aa5.59□□□□□ -1.51
CHD4-204ENST00000535810 SPANXA1Q9NS26 97 aa5.59□□□□□ -1.51
CHD4-204ENST00000535810 IGIPA6NJ69 53 aa5.58□□□□□ -1.52
CHD4-204ENST00000535810 MRPS36P82909 103 aaKnown RBP5.58□□□□□ -1.52
CHD4-204ENST00000535810 SYCNQ0VAF6 134 aa5.58□□□□□ -1.52
CHD4-204ENST00000535810 OPRPNQ99935 248 aaPredicted RBP5.58□□□□□ -1.52
CHD4-204ENST00000535810 MRPL35Q9NZE8 188 aaKnown RBP5.58□□□□□ -1.52
CHD4-204ENST00000535810 PYGO1Q9Y3Y4 419 aa5.58□□□□□ -1.52
CHD4-204ENST00000535810 IGLV4-69A0A075B6H9 119 aa5.57□□□□□ -1.52
CHD4-204ENST00000535810 SLC25A34Q6PIV7 304 aa5.57□□□□□ -1.52
CHD4-204ENST00000535810 C5orf38Q86SI9 138 aa5.57□□□□□ -1.52
CHD4-204ENST00000535810 PKIGQ9Y2B9 76 aa5.57□□□□□ -1.52
CHD4-204ENST00000535810 IGHV3OR16-9A0A0B4J2B5 98 aa5.56□□□□□ -1.52
CHD4-204ENST00000535810 OXTP01178 125 aa5.56□□□□□ -1.52
CHD4-204ENST00000535810 COX8AP10176 69 aa5.56□□□□□ -1.52
CHD4-204ENST00000535810 HERVK_113P61574 105 aa5.56□□□□□ -1.52
CHD4-204ENST00000535810 Q6ZRU5 148 aa5.56□□□□□ -1.52
CHD4-204ENST00000535810 STPG4Q8N801 248 aa5.56□□□□□ -1.52
CHD4-204ENST00000535810 C14orf144Q96I85 54 aa5.56□□□□□ -1.52
CHD4-204ENST00000535810 KRTAP4-12Q9BQ66 201 aa5.56□□□□□ -1.52
CHD4-204ENST00000535810 VCX2Q9H322 139 aa5.56□□□□□ -1.52
CHD4-204ENST00000535810 CST9LQ9H4G1 147 aa5.56□□□□□ -1.52
CHD4-204ENST00000535810 LINC00474Q9P2X8 69 aa5.56□□□□□ -1.52
CHD4-204ENST00000535810 IGLV4-3A0A075B6K6 122 aa5.55□□□□□ -1.52
CHD4-204ENST00000535810 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
CHD4-204ENST00000535810 APOMO95445 188 aa5.55□□□□□ -1.52
CHD4-204ENST00000535810 SPAG11BQ08648 103 aa5.55□□□□□ -1.52
CHD4-204ENST00000535810 ZC2HC1BQ5TFG8 222 aa5.55□□□□□ -1.52
CHD4-204ENST00000535810 C7orf33Q8WU49 177 aa5.55□□□□□ -1.52
CHD4-204ENST00000535810 C2orf48Q96LS8 159 aa5.55□□□□□ -1.52
CHD4-204ENST00000535810 CAMK2N2Q96S95 79 aa5.55□□□□□ -1.52
CHD4-204ENST00000535810 C2orf88Q9BSF0 95 aa5.55□□□□□ -1.52
CHD4-204ENST00000535810 M0R143 59 aa5.54□□□□□ -1.52
CHD4-204ENST00000535810 DLEU1O43261 78 aa5.54□□□□□ -1.52
CHD4-204ENST00000535810 NMUP48645 174 aa5.54□□□□□ -1.52
CHD4-204ENST00000535810 LBHQ53QV2 105 aaPredicted RBP5.54□□□□□ -1.52
CHD4-204ENST00000535810 ORAOV1Q8WV07 137 aa5.54□□□□□ -1.52
CHD4-204ENST00000535810 LRP2P98164 4655 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms