RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 TOMM6Q96B49 74 aa8.2□□□□□ -1.1
CAPN1-228ENST00000534373 GNB1LQ9BYB4 327 aa8.2□□□□□ -1.1
CAPN1-228ENST00000534373 FAM168BA1KXE4 195 aa8.19□□□□□ -1.1
CAPN1-228ENST00000534373 IGLV7-43P04211 117 aa8.19□□□□□ -1.1
CAPN1-228ENST00000534373 CKS1BP61024 79 aa8.19□□□□□ -1.1
CAPN1-228ENST00000534373 COX19Q49B96 90 aa8.19□□□□□ -1.1
CAPN1-228ENST00000534373 ZC2HC1BQ5TFG8 222 aa8.19□□□□□ -1.1
CAPN1-228ENST00000534373 ERASQ7Z444 233 aa8.19□□□□□ -1.1
CAPN1-228ENST00000534373 DIRC1Q969H9 104 aa8.19□□□□□ -1.1
CAPN1-228ENST00000534373 MRPL18Q9H0U6 180 aaKnown RBP8.19□□□□□ -1.1
CAPN1-228ENST00000534373 FABP9Q0Z7S8 132 aa8.18□□□□□ -1.1
CAPN1-228ENST00000534373 ODF1Q14990 250 aa8.18□□□□□ -1.1
CAPN1-228ENST00000534373 ALKBH7Q9BT30 221 aaPredicted RBP8.18□□□□□ -1.1
CAPN1-228ENST00000534373 GEMIN7Q9H840 131 aaKnown RBP8.18□□□□□ -1.1
CAPN1-228ENST00000534373 LINC01546A6NGU7 62 aa8.17□□□□□ -1.1
CAPN1-228ENST00000534373 FAM19A5Q7Z5A7 132 aaPredicted RBP8.17□□□□□ -1.1
CAPN1-228ENST00000534373 KRTAP7-1Q8IUC3 87 aa8.17□□□□□ -1.1
CAPN1-228ENST00000534373 TOMM7Q9P0U1 55 aa8.17□□□□□ -1.1
CAPN1-228ENST00000534373 CDKN2A-AS1Q9UH64 79 aa8.17□□□□□ -1.1
CAPN1-228ENST00000534373 M0QXV9 152 aa8.16□□□□□ -1.1
CAPN1-228ENST00000534373 C9orf129Q5T035 196 aaKnown RBP8.16□□□□□ -1.1
CAPN1-228ENST00000534373 SCGB3A1Q96QR1 104 aa8.16□□□□□ -1.1
CAPN1-228ENST00000534373 CXCL5P42830 114 aa8.15□□□□□ -1.1
CAPN1-228ENST00000534373 UBE2BP63146 152 aa8.15□□□□□ -1.1
CAPN1-228ENST00000534373 KRTAP11-1Q8IUC1 163 aa8.15□□□□□ -1.1
CAPN1-228ENST00000534373 CBLN2Q8IUK8 224 aa8.15□□□□□ -1.1
CAPN1-228ENST00000534373 TRAPPC1Q9Y5R8 145 aa8.15□□□□□ -1.1
CAPN1-228ENST00000534373 LRP2P98164 4655 aa8.14□□□□□ -1.11
CAPN1-228ENST00000534373 TINCRA0A1B0GVN0 87 aa8.14□□□□□ -1.11
CAPN1-228ENST00000534373 F8VRH5 84 aa8.14□□□□□ -1.11
CAPN1-228ENST00000534373 H0Y9J4 135 aa8.14□□□□□ -1.11
CAPN1-228ENST00000534373 PDZD11Q5EBL8 140 aa8.13□□□□□ -1.11
CAPN1-228ENST00000534373 IGLV5-45A0A087WSX0 123 aa8.12□□□□□ -1.11
CAPN1-228ENST00000534373 LBHQ53QV2 105 aaPredicted RBP8.12□□□□□ -1.11
CAPN1-228ENST00000534373 FA2HQ7L5A8 372 aa8.12□□□□□ -1.11
CAPN1-228ENST00000534373 LINC00469Q8N7U9 141 aa8.12□□□□□ -1.11
CAPN1-228ENST00000534373 SMCO4Q9NRQ5 59 aa8.12□□□□□ -1.11
CAPN1-228ENST00000534373 SMIM1B2RUZ4 78 aa8.11□□□□□ -1.11
CAPN1-228ENST00000534373 YPEL4Q96NS1 127 aa8.11□□□□□ -1.11
CAPN1-228ENST00000534373 CST9LQ9H4G1 147 aa8.11□□□□□ -1.11
CAPN1-228ENST00000534373 C22orf24Q9Y442 160 aa8.11□□□□□ -1.11
CAPN1-228ENST00000534373 IGLV1-50A0A075B6I6 118 aa8.1□□□□□ -1.11
CAPN1-228ENST00000534373 NUPR1O60356 82 aa8.1□□□□□ -1.11
CAPN1-228ENST00000534373 PMVKQ15126 192 aa8.1□□□□□ -1.11
CAPN1-228ENST00000534373 TP73-AS1Q9UF72 201 aa8.1□□□□□ -1.11
CAPN1-228ENST00000534373 COX7B2Q8TF08 81 aa8.09□□□□□ -1.11
CAPN1-228ENST00000534373 XAGE1AQ9HD64 81 aa8.09□□□□□ -1.11
CAPN1-228ENST00000534373 ZNF861PO60384 105 aa8.08□□□□□ -1.12
CAPN1-228ENST00000534373 PRR26Q8N8Z3 221 aa8.08□□□□□ -1.12
CAPN1-228ENST00000534373 C18orf32Q8TCD1 76 aa8.08□□□□□ -1.12
CAPN1-228ENST00000534373 H3BRM9 83 aa8.07□□□□□ -1.12
CAPN1-228ENST00000534373 KRTAP1-4P0C5Y4 121 aa8.07□□□□□ -1.12
CAPN1-228ENST00000534373 MRPL55Q7Z7F7 128 aaKnown RBP8.07□□□□□ -1.12
CAPN1-228ENST00000534373 RPL13AP40429 203 aaKnown RBP8.06□□□□□ -1.12
CAPN1-228ENST00000534373 LINC00614P0C842 121 aa8.05□□□□□ -1.12
CAPN1-228ENST00000534373 SPINK8P0C7L1 97 aa8.04□□□□□ -1.12
CAPN1-228ENST00000534373 IGLC3P0DOY3 106 aa8.04□□□□□ -1.12
CAPN1-228ENST00000534373 PMCHL1Q16048 86 aa8.04□□□□□ -1.12
CAPN1-228ENST00000534373 RNF213Q63HN8 5207 aa8.03□□□□□ -1.12
CAPN1-228ENST00000534373 SCO1O75880 301 aa8.03□□□□□ -1.12
CAPN1-228ENST00000534373 ATP5LO75964 103 aa8.03□□□□□ -1.12
CAPN1-228ENST00000534373 RAB5BP61020 215 aa8.03□□□□□ -1.12
CAPN1-228ENST00000534373 URB1-AS1Q96HZ7 61 aa8.03□□□□□ -1.12
CAPN1-228ENST00000534373 IGLV5-37A0A075B6J1 123 aa8.02□□□□□ -1.13
CAPN1-228ENST00000534373 A0A096LNJ9 63 aa8.02□□□□□ -1.13
CAPN1-228ENST00000534373 IGLV5-39A0A0G2JS06 123 aa8.02□□□□□ -1.13
CAPN1-228ENST00000534373 BCE1O60756 84 aa8.02□□□□□ -1.13
CAPN1-228ENST00000534373 HBDP02042 147 aa8.02□□□□□ -1.13
CAPN1-228ENST00000534373 TRGC2P03986 189 aa8.02□□□□□ -1.13
CAPN1-228ENST00000534373 RPL28P46779 137 aaKnown RBP8.02□□□□□ -1.13
CAPN1-228ENST00000534373 LINC00167Q96N53 147 aa8.02□□□□□ -1.13
CAPN1-228ENST00000534373 NDUFA6P56556 154 aa8□□□□□ -1.13
CAPN1-228ENST00000534373 COX17Q14061 63 aa8□□□□□ -1.13
CAPN1-228ENST00000534373 SFTA2Q6UW10 78 aa8□□□□□ -1.13
CAPN1-228ENST00000534373 BAGE3Q86Y29 109 aa8□□□□□ -1.13
CAPN1-228ENST00000534373 COLCA2A8K830 154 aa7.99□□□□□ -1.13
CAPN1-228ENST00000534373 ZNF22P17026 224 aaPredicted RBP7.99□□□□□ -1.13
CAPN1-228ENST00000534373 NKAPP1Q8N9T2 125 aa7.99□□□□□ -1.13
CAPN1-228ENST00000534373 RPL37AP8A6NKH3 93 aa7.98□□□□□ -1.13
CAPN1-228ENST00000534373 CHCHD1Q96BP2 118 aaKnown RBP7.97□□□□□ -1.13
CAPN1-228ENST00000534373 HSBP1O75506 76 aa7.96□□□□□ -1.14
CAPN1-228ENST00000534373 PFN2P35080 140 aa7.96□□□□□ -1.14
CAPN1-228ENST00000534373 ERG28Q9UKR5 140 aa7.96□□□□□ -1.14
CAPN1-228ENST00000534373 GAGE10A6NGK3 116 aa7.95□□□□□ -1.14
CAPN1-228ENST00000534373 CRYGAP11844 174 aa7.95□□□□□ -1.14
CAPN1-228ENST00000534373 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
CAPN1-228ENST00000534373 SND1-IT1Q9HBX3 110 aa7.95□□□□□ -1.14
CAPN1-228ENST00000534373 LPAP08519 4548 aa7.95□□□□□ -1.14
CAPN1-228ENST00000534373 C11orf86A6NJI1 115 aa7.94□□□□□ -1.14
CAPN1-228ENST00000534373 SERF1AO75920 110 aa7.94□□□□□ -1.14
CAPN1-228ENST00000534373 TMEM170BQ5T4T1 132 aa7.94□□□□□ -1.14
CAPN1-228ENST00000534373 KRTAP13-1Q8IUC0 172 aa7.94□□□□□ -1.14
CAPN1-228ENST00000534373 FAM19A2Q8N3H0 131 aa7.94□□□□□ -1.14
CAPN1-228ENST00000534373 VPREB1P12018 145 aa7.93□□□□□ -1.14
CAPN1-228ENST00000534373 UBE2AP49459 152 aa7.93□□□□□ -1.14
CAPN1-228ENST00000534373 CHTOPQ9Y3Y2 248 aaKnown RBP7.93□□□□□ -1.14
CAPN1-228ENST00000534373 TRAV12-1A0A0B4J245 112 aa7.92□□□□□ -1.14
CAPN1-228ENST00000534373 IFI27L1Q96BM0 104 aa7.92□□□□□ -1.14
CAPN1-228ENST00000534373 ZNF625Q96I27 306 aaPredicted RBP7.92□□□□□ -1.14
CAPN1-228ENST00000534373 IGKV2-28A0A075B6P5 120 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms