RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 C2orf82Q6UX34 121 aa14.54□□□□□ -0.08
PACSIN3-209ENST00000532457 C6orf226Q5I0X4 101 aa14.53□□□□□ -0.08
PACSIN3-209ENST00000532457 SCGB1D4Q6XE38 83 aa14.53□□□□□ -0.08
PACSIN3-209ENST00000532457 Q8IZM0 81 aa14.53□□□□□ -0.08
PACSIN3-209ENST00000532457 C6orf223Q8N319 242 aa14.53□□□□□ -0.08
PACSIN3-209ENST00000532457 C15orf56Q8N910 161 aa14.53□□□□□ -0.08
PACSIN3-209ENST00000532457 Q6ZR54 194 aa14.52□□□□□ -0.08
PACSIN3-209ENST00000532457 HSD52Q0P140 79 aa14.51□□□□□ -0.09
PACSIN3-209ENST00000532457 APOMO95445 188 aa14.5□□□□□ -0.09
PACSIN3-209ENST00000532457 LITAFQ99732 161 aa14.5□□□□□ -0.09
PACSIN3-209ENST00000532457 RYR3Q15413 4870 aa14.5□□□□□ -0.09
PACSIN3-209ENST00000532457 PRSS2P07478 247 aa14.5□□□□□ -0.09
PACSIN3-209ENST00000532457 ADAMTSL4-AS1Q5T5F5 129 aa14.5□□□□□ -0.09
PACSIN3-209ENST00000532457 HIGD2BQ4VC39 106 aa14.49□□□□□ -0.09
PACSIN3-209ENST00000532457 SPAG11BQ08648 103 aa14.48□□□□□ -0.09
PACSIN3-209ENST00000532457 RMI2Q96E14 147 aa14.48□□□□□ -0.09
PACSIN3-209ENST00000532457 C10orf25Q5T742 122 aa14.48□□□□□ -0.09
PACSIN3-209ENST00000532457 UNQ6190/PRO20217Q6UXQ8 127 aa14.46□□□□□ -0.09
PACSIN3-209ENST00000532457 DNAH2Q9P225 4427 aa14.46□□□□□ -0.1
PACSIN3-209ENST00000532457 C1orf134Q5TEV5 83 aa14.45□□□□□ -0.1
PACSIN3-209ENST00000532457 CFAP161Q6P656 301 aa14.45□□□□□ -0.1
PACSIN3-209ENST00000532457 NTN5Q8WTR8 489 aaPredicted RBP14.45□□□□□ -0.1
PACSIN3-209ENST00000532457 A0A0U1RRA0 63 aa14.45□□□□□ -0.1
PACSIN3-209ENST00000532457 CKS1BP61024 79 aa14.45□□□□□ -0.1
PACSIN3-209ENST00000532457 HERV-K104P63124 156 aa14.45□□□□□ -0.1
PACSIN3-209ENST00000532457 LECT2O14960 151 aa14.44□□□□□ -0.1
PACSIN3-209ENST00000532457 WFDC2Q14508 124 aa14.44□□□□□ -0.1
PACSIN3-209ENST00000532457 USP17L23D6RBM5 183 aa14.43□□□□□ -0.1
PACSIN3-209ENST00000532457 SMIM13P0DJ93 91 aa14.43□□□□□ -0.1
PACSIN3-209ENST00000532457 DAND5Q8N907 189 aa14.43□□□□□ -0.1
PACSIN3-209ENST00000532457 HIST1H4GQ99525 98 aa14.43□□□□□ -0.1
PACSIN3-209ENST00000532457 Q6ZRN7 208 aaPredicted RBP14.43□□□□□ -0.1
PACSIN3-209ENST00000532457 TM2D2Q9BX73 214 aa14.43□□□□□ -0.1
PACSIN3-209ENST00000532457 SPANXB1Q9NS25 103 aaPredicted RBP14.43□□□□□ -0.1
PACSIN3-209ENST00000532457 COX11Q9Y6N1 276 aa14.43□□□□□ -0.1
PACSIN3-209ENST00000532457 C9orf116Q5BN46 136 aaPredicted RBP14.42□□□□□ -0.1
PACSIN3-209ENST00000532457 GVQW2A0A096LPI5 108 aaPredicted RBP14.41□□□□□ -0.1
PACSIN3-209ENST00000532457 EIF4EBP3O60516 100 aaPredicted RBP14.41□□□□□ -0.1
PACSIN3-209ENST00000532457 SRSF9Q13242 221 aaKnown RBP eCLIP14.41□□□□□ -0.1
PACSIN3-209ENST00000532457 TAL2Q16559 108 aa14.41□□□□□ -0.1
PACSIN3-209ENST00000532457 ZNF561-AS1K7EIQ3 104 aa14.41□□□□□ -0.1
PACSIN3-209ENST00000532457 TIMM17BO60830 172 aa14.41□□□□□ -0.1
PACSIN3-209ENST00000532457 MEIG1Q5JSS6 88 aa14.4□□□□□ -0.1
PACSIN3-209ENST00000532457 CEND1Q8N111 149 aa14.4□□□□□ -0.1
PACSIN3-209ENST00000532457 SLPIP03973 132 aa14.39□□□□□ -0.11
PACSIN3-209ENST00000532457 GCSHP23434 173 aa14.39□□□□□ -0.11
PACSIN3-209ENST00000532457 CXCL5P42830 114 aa14.39□□□□□ -0.11
PACSIN3-209ENST00000532457 TMEM238C9JI98 176 aa14.38□□□□□ -0.11
PACSIN3-209ENST00000532457 FXYD2P54710 66 aa14.38□□□□□ -0.11
PACSIN3-209ENST00000532457 A6NDN8 102 aa14.38□□□□□ -0.11
PACSIN3-209ENST00000532457 PFN2P35080 140 aa14.38□□□□□ -0.11
PACSIN3-209ENST00000532457 MUSTN1Q8IVN3 82 aa14.38□□□□□ -0.11
PACSIN3-209ENST00000532457 ERG28Q9UKR5 140 aa14.38□□□□□ -0.11
PACSIN3-209ENST00000532457 TAX1BP3O14907 124 aa14.37□□□□□ -0.11
PACSIN3-209ENST00000532457 SFTA2Q6UW10 78 aa14.37□□□□□ -0.11
PACSIN3-209ENST00000532457 SPANXDQ9BXN6 97 aa14.37□□□□□ -0.11
PACSIN3-209ENST00000532457 SPANXCQ9NY87 97 aa14.37□□□□□ -0.11
PACSIN3-209ENST00000532457 C6orf48Q9UBA6 75 aa14.37□□□□□ -0.11
PACSIN3-209ENST00000532457 PSCAO43653 123 aa14.36□□□□□ -0.11
PACSIN3-209ENST00000532457 NPC2P61916 151 aa14.36□□□□□ -0.11
PACSIN3-209ENST00000532457 CIRBPQ14011 172 aaKnown RBP14.36□□□□□ -0.11
PACSIN3-209ENST00000532457 Q6ZRU5 148 aa14.36□□□□□ -0.11
PACSIN3-209ENST00000532457 FRAS1Q86XX4 4008 aa14.36□□□□□ -0.11
PACSIN3-209ENST00000532457 LINC00158P58513 81 aa14.36□□□□□ -0.11
PACSIN3-209ENST00000532457 C2orf48Q96LS8 159 aa14.36□□□□□ -0.11
PACSIN3-209ENST00000532457 CAMK2N2Q96S95 79 aa14.36□□□□□ -0.11
PACSIN3-209ENST00000532457 Q6ZVH6 145 aa14.35□□□□□ -0.11
PACSIN3-209ENST00000532457 LRCOL1A6NCL2 159 aa14.34□□□□□ -0.11
PACSIN3-209ENST00000532457 SOSTDC1Q6X4U4 206 aa14.34□□□□□ -0.11
PACSIN3-209ENST00000532457 MIR7-3HGQ8N6C7 128 aa14.34□□□□□ -0.11
PACSIN3-209ENST00000532457 RTL8CO15255 209 aa14.32□□□□□ -0.12
PACSIN3-209ENST00000532457 LINC00336Q6ZUF6 198 aa14.32□□□□□ -0.12
PACSIN3-209ENST00000532457 LINC00308Q8TCZ7 52 aa14.31□□□□□ -0.12
PACSIN3-209ENST00000532457 SYCNQ0VAF6 134 aa14.31□□□□□ -0.12
PACSIN3-209ENST00000532457 PTTG1IPP53801 180 aa14.3□□□□□ -0.12
PACSIN3-209ENST00000532457 DNAH17Q9UFH2 4485 aa14.29□□□□□ -0.12
PACSIN3-209ENST00000532457 TRBV30A0A0K0K1B3 111 aa14.28□□□□□ -0.12
PACSIN3-209ENST00000532457 A4D1N5 150 aa14.28□□□□□ -0.12
PACSIN3-209ENST00000532457 F8WDY8 70 aa14.28□□□□□ -0.12
PACSIN3-209ENST00000532457 COX17Q14061 63 aa14.28□□□□□ -0.12
PACSIN3-209ENST00000532457 IFITM1P13164 125 aa14.27□□□□□ -0.13
PACSIN3-209ENST00000532457 K7ERJ3 54 aa14.25□□□□□ -0.13
PACSIN3-209ENST00000532457 NHP2Q9NX24 153 aaKnown RBP14.25□□□□□ -0.13
PACSIN3-209ENST00000532457 CARD19Q96LW7 228 aa14.25□□□□□ -0.13
PACSIN3-209ENST00000532457 FAT2Q9NYQ8 4349 aa14.24□□□□□ -0.13
PACSIN3-209ENST00000532457 C9orf118A6NHY6 69 aa14.24□□□□□ -0.13
PACSIN3-209ENST00000532457 CFC1BP0CG36 223 aa14.24□□□□□ -0.13
PACSIN3-209ENST00000532457 CFC1P0CG37 223 aa14.24□□□□□ -0.13
PACSIN3-209ENST00000532457 SND1-IT1Q9HBX3 110 aa14.24□□□□□ -0.13
PACSIN3-209ENST00000532457 RPL24P83731 157 aaKnown RBP14.23□□□□□ -0.13
PACSIN3-209ENST00000532457 RAB37Q96AX2 223 aa14.22□□□□□ -0.13
PACSIN3-209ENST00000532457 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.22□□□□□ -0.13
PACSIN3-209ENST00000532457 TNP2Q05952 138 aa14.22□□□□□ -0.13
PACSIN3-209ENST00000532457 A0A087WTM6 91 aa14.21□□□□□ -0.13
PACSIN3-209ENST00000532457 A0A1B0GWB2 263 aa14.21□□□□□ -0.13
PACSIN3-209ENST00000532457 RNF151Q2KHN1 245 aa14.21□□□□□ -0.13
PACSIN3-209ENST00000532457 LOC107984156A0A0G2JMH3 177 aa14.2□□□□□ -0.14
PACSIN3-209ENST00000532457 TMEM238LA0A1B0GVL6 79 aa14.2□□□□□ -0.14
PACSIN3-209ENST00000532457 A6NJY4 79 aa14.2□□□□□ -0.14
PACSIN3-209ENST00000532457 VAMP3Q15836 100 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms